RNA–Protein interactions for RNA: ENST00000533688.5

PDZD3-213, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-213ENST00000533688 KIF13AQ9H1H9 1805 aa28.94■■■□□ 2.22
PDZD3-213ENST00000533688 CUL7Q14999 1698 aa28.85■■■□□ 2.21
PDZD3-213ENST00000533688 KIF27Q86VH2 1401 aa28.85■■■□□ 2.21
PDZD3-213ENST00000533688 IGF1RP08069 1367 aa28.83■■■□□ 2.21
PDZD3-213ENST00000533688 KIAA0586Q9BVV6 1533 aa28.82■■■□□ 2.2
PDZD3-213ENST00000533688 ADCY10Q96PN6 1610 aa28.82■■■□□ 2.2
PDZD3-213ENST00000533688 NPM1P06748 294 aaKnown RBP eCLIP28.79■■■□□ 2.2
PDZD3-213ENST00000533688 MAPKBP1O60336 1514 aa28.79■■■□□ 2.2
PDZD3-213ENST00000533688 ABCC10Q5T3U5 1492 aa28.78■■■□□ 2.2
PDZD3-213ENST00000533688 FAM69CQ0P6D2 419 aa28.77■■■□□ 2.2
PDZD3-213ENST00000533688 DIP2BQ9P265 1576 aa28.75■■■□□ 2.19
PDZD3-213ENST00000533688 CARMIL1Q5VZK9 1371 aa28.64■■■□□ 2.18
PDZD3-213ENST00000533688 TTBK1Q5TCY1 1321 aaPredicted RBP28.63■■■□□ 2.17
PDZD3-213ENST00000533688 PTPRGP23470 1445 aa28.6■■■□□ 2.17
PDZD3-213ENST00000533688 KDM6BO15054 1643 aa28.56■■■□□ 2.16
PDZD3-213ENST00000533688 IQGAP2Q13576 1575 aa28.56■■■□□ 2.16
PDZD3-213ENST00000533688 CARMIL2Q6F5E8 1435 aa28.56■■■□□ 2.16
PDZD3-213ENST00000533688 TSPOAP1O95153 1857 aa28.54■■■□□ 2.16
PDZD3-213ENST00000533688 TNIKQ9UKE5 1360 aa28.53■■■□□ 2.16
PDZD3-213ENST00000533688 ABCC2Q92887 1545 aa28.49■■■□□ 2.15
PDZD3-213ENST00000533688 DISP1Q96F81 1524 aa28.43■■■□□ 2.14
PDZD3-213ENST00000533688 ASXL2Q76L83 1435 aa28.43■■■□□ 2.14
PDZD3-213ENST00000533688 UHRF1BP1LA0JNW5 1464 aa28.39■■■□□ 2.13
PDZD3-213ENST00000533688 PLB1Q6P1J6 1458 aa28.39■■■□□ 2.13
PDZD3-213ENST00000533688 RAPGEF2Q9Y4G8 1499 aa28.39■■■□□ 2.13
PDZD3-213ENST00000533688 UACAQ9BZF9 1416 aa28.38■■■□□ 2.13
PDZD3-213ENST00000533688 UGGT2Q9NYU1 1516 aa28.34■■■□□ 2.13
PDZD3-213ENST00000533688 GLI2P10070 1586 aa28.33■■■□□ 2.13
PDZD3-213ENST00000533688 KIAA0556O60303 1618 aa28.32■■■□□ 2.12
PDZD3-213ENST00000533688 PPRC1Q5VV67 1664 aaKnown RBP28.32■■■□□ 2.12
PDZD3-213ENST00000533688 KDM4FA0A1W2PPD8 638 aa28.29■■■□□ 2.12
PDZD3-213ENST00000533688 KDM5BQ9UGL1 1544 aa28.27■■■□□ 2.12
PDZD3-213ENST00000533688 ZCCHC11Q5TAX3 1644 aaKnown RBP28.26■■■□□ 2.11
PDZD3-213ENST00000533688 EPRSP07814 1512 aaKnown RBP28.25■■■□□ 2.11
PDZD3-213ENST00000533688 MAP3K4Q9Y6R4 1608 aa28.21■■■□□ 2.11
PDZD3-213ENST00000533688 CTTNBP2Q8WZ74 1663 aa28.2■■■□□ 2.11
PDZD3-213ENST00000533688 TEX14Q8IWB6 1497 aa28.14■■■□□ 2.09
PDZD3-213ENST00000533688 COL17A1Q9UMD9 1497 aaPredicted RBP28.13■■■□□ 2.09
PDZD3-213ENST00000533688 WDR7Q9Y4E6 1490 aa28.13■■■□□ 2.09
PDZD3-213ENST00000533688 GOLGA3Q08378 1498 aa28.1■■■□□ 2.09
PDZD3-213ENST00000533688 ADGRL1O94910 1474 aa28.09■■■□□ 2.09
PDZD3-213ENST00000533688 ABCA8O94911 1581 aa28.04■■■□□ 2.08
PDZD3-213ENST00000533688 PRXQ9BXM0 1461 aa28.03■■■□□ 2.08
PDZD3-213ENST00000533688 CFAP43Q8NDM7 1665 aa27.96■■■□□ 2.07
PDZD3-213ENST00000533688 CD109Q6YHK3 1445 aa27.94■■■□□ 2.06
PDZD3-213ENST00000533688 KCNH8Q96L42 1107 aa27.94■■■□□ 2.06
PDZD3-213ENST00000533688 MAGI3Q5TCQ9 1506 aa27.92■■■□□ 2.06
PDZD3-213ENST00000533688 ARID3CA6NKF2 412 aa27.89■■■□□ 2.06
PDZD3-213ENST00000533688 P3H3Q8IVL6 736 aa27.86■■■□□ 2.05
PDZD3-213ENST00000533688 FAM9AQ8IZU1 332 aaPredicted RBP27.79■■■□□ 2.04
PDZD3-213ENST00000533688 SAMD9Q5K651 1589 aa27.78■■■□□ 2.04
PDZD3-213ENST00000533688 HECW2Q9P2P5 1572 aa27.78■■■□□ 2.04
PDZD3-213ENST00000533688 ATP10BO94823 1461 aa27.78■■■□□ 2.04
PDZD3-213ENST00000533688 KIF21BO75037 1637 aa27.75■■■□□ 2.03
PDZD3-213ENST00000533688 CSRNP3Q8WYN3 585 aa27.73■■■□□ 2.03
PDZD3-213ENST00000533688 RAPGEF6Q8TEU7 1601 aa27.73■■■□□ 2.03
PDZD3-213ENST00000533688 ABCA9Q8IUA7 1624 aa27.71■■■□□ 2.03
PDZD3-213ENST00000533688 ARAP3Q8WWN8 1544 aa27.7■■■□□ 2.02
PDZD3-213ENST00000533688 RANGAP1P46060 587 aaPredicted RBP27.66■■■□□ 2.02
PDZD3-213ENST00000533688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.65■■■□□ 2.02
PDZD3-213ENST00000533688 HNRNPUL2Q1KMD3 747 aaKnown RBP27.65■■■□□ 2.02
PDZD3-213ENST00000533688 ILDR1Q86SU0 546 aaPredicted RBP27.65■■■□□ 2.02
PDZD3-213ENST00000533688 NUP153P49790 1475 aaKnown RBP27.62■■■□□ 2.01
PDZD3-213ENST00000533688 FHOD3Q2V2M9 1422 aa27.61■■■□□ 2.01
PDZD3-213ENST00000533688 EEA1Q15075 1411 aa27.59■■■□□ 2.01
PDZD3-213ENST00000533688 PHLDB1Q86UU1 1377 aa27.58■■■□□ 2.01
PDZD3-213ENST00000533688 NEO1Q92859 1461 aa27.57■■■□□ 2
PDZD3-213ENST00000533688 RAPGEF3O95398 923 aa27.56■■■□□ 2
PDZD3-213ENST00000533688 FRMPD1Q5SYB0 1578 aa27.54■■■□□ 2
PDZD3-213ENST00000533688 ADAMTSL3P82987 1691 aa27.47■■□□□ 1.99
PDZD3-213ENST00000533688 EFCAB5A4FU69 1503 aa27.46■■□□□ 1.99
PDZD3-213ENST00000533688 PTPRMP28827 1452 aa27.45■■□□□ 1.99
PDZD3-213ENST00000533688 PLEKHD1A6NEE1 506 aa27.42■■□□□ 1.98
PDZD3-213ENST00000533688 ARID4BQ4LE39 1312 aaPredicted RBP27.41■■□□□ 1.98
PDZD3-213ENST00000533688 ARHGEF40Q8TER5 1519 aa27.41■■□□□ 1.98
PDZD3-213ENST00000533688 BCORL1Q5H9F3 1711 aa27.41■■□□□ 1.98
PDZD3-213ENST00000533688 TTC37Q6PGP7 1564 aa27.4■■□□□ 1.98
PDZD3-213ENST00000533688 MADDQ8WXG6 1647 aa27.4■■□□□ 1.98
PDZD3-213ENST00000533688 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.4■■□□□ 1.98
PDZD3-213ENST00000533688 CFAP74Q9C0B2 1584 aa27.39■■□□□ 1.98
PDZD3-213ENST00000533688 FANCAO15360 1455 aa27.39■■□□□ 1.98
PDZD3-213ENST00000533688 DENND4BO75064 1496 aaPredicted RBP27.38■■□□□ 1.97
PDZD3-213ENST00000533688 RICTORQ6R327 1708 aa27.38■■□□□ 1.97
PDZD3-213ENST00000533688 AKNAQ7Z591 1439 aa27.37■■□□□ 1.97
PDZD3-213ENST00000533688 CDK13Q14004 1512 aaKnown RBP27.36■■□□□ 1.97
PDZD3-213ENST00000533688 EHMT2Q96KQ7 1210 aa27.33■■□□□ 1.97
PDZD3-213ENST00000533688 RIMS1Q86UR5 1692 aaKnown RBP27.29■■□□□ 1.96
PDZD3-213ENST00000533688 ZMYM4Q5VZL5 1548 aa27.28■■□□□ 1.96
PDZD3-213ENST00000533688 PCF11O94913 1555 aaKnown RBP27.26■■□□□ 1.96
PDZD3-213ENST00000533688 ZFYVE16Q7Z3T8 1539 aa27.26■■□□□ 1.96
PDZD3-213ENST00000533688 YEATS2Q9ULM3 1422 aa27.24■■□□□ 1.95
PDZD3-213ENST00000533688 HECW1Q76N89 1606 aa27.24■■□□□ 1.95
PDZD3-213ENST00000533688 UBTFP17480 764 aaKnown RBP27.23■■□□□ 1.95
PDZD3-213ENST00000533688 ATP1B4Q9UN42 357 aaPredicted RBP27.23■■□□□ 1.95
PDZD3-213ENST00000533688 LMTK3Q96Q04 1460 aa27.23■■□□□ 1.95
PDZD3-213ENST00000533688 SIGLEC1Q9BZZ2 1709 aa27.21■■□□□ 1.95
PDZD3-213ENST00000533688 FMN1Q68DA7 1419 aa27.2■■□□□ 1.94
PDZD3-213ENST00000533688 POGZQ7Z3K3 1410 aa27.2■■□□□ 1.94
PDZD3-213ENST00000533688 PLPPR3Q6T4P5 718 aa27.19■■□□□ 1.94
PDZD3-213ENST00000533688 ARHGAP35Q9NRY4 1499 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms