RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 IRX6P78412 446 aaPredicted RBP10.82□□□□□ -0.68
CTNND1-234ENST00000532844 TRIM44Q96DX7 344 aaPredicted RBP10.82□□□□□ -0.68
CTNND1-234ENST00000532844 ARXQ96QS3 562 aa10.82□□□□□ -0.68
CTNND1-234ENST00000532844 WDR43Q15061 677 aaKnown RBP eCLIP10.81□□□□□ -0.683e-9■■■□□ 15.6
CTNND1-234ENST00000532844 RB1CC1Q8TDY2 1594 aa10.8□□□□□ -0.68
CTNND1-234ENST00000532844 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.8□□□□□ -0.68
CTNND1-234ENST00000532844 EEA1Q15075 1411 aa10.79□□□□□ -0.68
CTNND1-234ENST00000532844 TSPY4P0CV99 314 aa10.79□□□□□ -0.68
CTNND1-234ENST00000532844 TSPY10P0CW01 314 aa10.79□□□□□ -0.68
CTNND1-234ENST00000532844 RRP7BPQ9NSQ0 103 aa10.79□□□□□ -0.68
CTNND1-234ENST00000532844 EIF4G2P78344 907 aaKnown RBP eCLIP10.77□□□□□ -0.69
CTNND1-234ENST00000532844 WRNQ14191 1432 aaPredicted RBP eCLIP10.75□□□□□ -0.69
CTNND1-234ENST00000532844 HAP1P54257 671 aaPredicted RBP10.74□□□□□ -0.69
CTNND1-234ENST00000532844 CHMP7Q8WUX9 453 aaPredicted RBP10.74□□□□□ -0.69
CTNND1-234ENST00000532844 ANP32EQ9BTT0 268 aa10.72□□□□□ -0.69
CTNND1-234ENST00000532844 TNIKQ9UKE5 1360 aa10.72□□□□□ -0.69
CTNND1-234ENST00000532844 ERICH6BQ5W0A0 696 aa10.71□□□□□ -0.69
CTNND1-234ENST00000532844 CEP164Q9UPV0 1460 aa10.71□□□□□ -0.69
CTNND1-234ENST00000532844 C14orf37Q86TY3 774 aa10.7□□□□□ -0.7
CTNND1-234ENST00000532844 BAZ1BQ9UIG0 1483 aaKnown RBP10.7□□□□□ -0.7
CTNND1-234ENST00000532844 NCLP19338 710 aaKnown RBP10.7□□□□□ -0.7
CTNND1-234ENST00000532844 NACADO15069 1562 aa10.68□□□□□ -0.7
CTNND1-234ENST00000532844 ZBTB7CA1YPR0 619 aa10.67□□□□□ -0.7
CTNND1-234ENST00000532844 NAP1L5Q96NT1 182 aaPredicted RBP10.67□□□□□ -0.7
CTNND1-234ENST00000532844 KIF27Q86VH2 1401 aa10.67□□□□□ -0.7
CTNND1-234ENST00000532844 DNTTIP2Q5QJE6 756 aaKnown RBP10.67□□□□□ -0.7
CTNND1-234ENST00000532844 SENP3-EIF4A1A0A087X0R7 540 aa10.65□□□□□ -0.7
CTNND1-234ENST00000532844 SENP3Q9H4L4 574 aaPredicted RBP10.65□□□□□ -0.7
CTNND1-234ENST00000532844 PTMAP06454 111 aaKnown RBP10.65□□□□□ -0.7
CTNND1-234ENST00000532844 AMER1Q5JTC6 1135 aaPredicted RBP10.65□□□□□ -0.7
CTNND1-234ENST00000532844 MYH16Q9H6N6 1097 aa10.65□□□□□ -0.71
CTNND1-234ENST00000532844 RGL3Q3MIN7 710 aa10.64□□□□□ -0.71
CTNND1-234ENST00000532844 KCNH8Q96L42 1107 aa10.64□□□□□ -0.71
CTNND1-234ENST00000532844 PLEKHD1A6NEE1 506 aa10.64□□□□□ -0.71
CTNND1-234ENST00000532844 PLEKHG5O94827 1062 aa10.63□□□□□ -0.71
CTNND1-234ENST00000532844 DDRGK1Q96HY6 314 aa10.63□□□□□ -0.71
CTNND1-234ENST00000532844 SUPT16HQ9Y5B9 1047 aaKnown RBP10.63□□□□□ -0.71
CTNND1-234ENST00000532844 SIN3AQ96ST3 1273 aa10.62□□□□□ -0.71
CTNND1-234ENST00000532844 TULP1O00294 542 aaPredicted RBP10.62□□□□□ -0.71
CTNND1-234ENST00000532844 GOLGA6L22H0YM25 854 aa10.62□□□□□ -0.71
CTNND1-234ENST00000532844 NPHP1O15259 732 aa10.61□□□□□ -0.71
CTNND1-234ENST00000532844 CFDP1Q9UEE9 299 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-234ENST00000532844 CARD11Q9BXL7 1154 aa10.61□□□□□ -0.71
CTNND1-234ENST00000532844 BAZ1AQ9NRL2 1556 aaPredicted RBP10.6□□□□□ -0.71
CTNND1-234ENST00000532844 BECN1Q14457 450 aa10.6□□□□□ -0.71
CTNND1-234ENST00000532844 KNSTRNQ9Y448 316 aa10.59□□□□□ -0.71
CTNND1-234ENST00000532844 ARID4BQ4LE39 1312 aaPredicted RBP10.58□□□□□ -0.72
CTNND1-234ENST00000532844 PPP1R15AO75807 674 aaPredicted RBP10.57□□□□□ -0.72
CTNND1-234ENST00000532844 ZRSR1Q15695 479 aaKnown RBP10.57□□□□□ -0.72
CTNND1-234ENST00000532844 CDCA8Q53HL2 280 aa10.56□□□□□ -0.72
CTNND1-234ENST00000532844 CFAP53Q96M91 514 aa10.56□□□□□ -0.72
CTNND1-234ENST00000532844 CCNB3Q8WWL7 1395 aa10.56□□□□□ -0.72
CTNND1-234ENST00000532844 CECR2Q9BXF3 1484 aa10.56□□□□□ -0.72
CTNND1-234ENST00000532844 SOGA1O94964 1423 aa10.56□□□□□ -0.72
CTNND1-234ENST00000532844 RTN4Q9NQC3 1192 aaKnown RBP10.55□□□□□ -0.72
CTNND1-234ENST00000532844 PPP4R2Q9NY27 417 aa10.54□□□□□ -0.72
CTNND1-234ENST00000532844 NCBP3Q53F19 620 aaKnown RBP10.53□□□□□ -0.72
CTNND1-234ENST00000532844 TRHP20396 242 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-234ENST00000532844 FHAD1B1AJZ9 1412 aa10.53□□□□□ -0.72
CTNND1-234ENST00000532844 EIF4G1Q04637 1599 aaKnown RBP10.53□□□□□ -0.72
CTNND1-234ENST00000532844 FTSJ3Q8IY81 847 aaKnown RBP10.52□□□□□ -0.73
CTNND1-234ENST00000532844 CC2D1BQ5T0F9 858 aaKnown RBP10.52□□□□□ -0.73
CTNND1-234ENST00000532844 TNNT3P45378 269 aaPredicted RBP10.51□□□□□ -0.73
CTNND1-234ENST00000532844 PPM1GO15355 546 aaPredicted RBP10.51□□□□□ -0.73
CTNND1-234ENST00000532844 NEUROD2Q15784 382 aa10.51□□□□□ -0.73
CTNND1-234ENST00000532844 ABCC8Q09428 1581 aa10.5□□□□□ -0.73
CTNND1-234ENST00000532844 CUX2O14529 1486 aa10.5□□□□□ -0.73
CTNND1-234ENST00000532844 CARMIL1Q5VZK9 1371 aa10.49□□□□□ -0.73
CTNND1-234ENST00000532844 LAS1LQ9Y4W2 734 aaKnown RBP10.49□□□□□ -0.73
CTNND1-234ENST00000532844 GOLGA6L6A8MZA4 724 aa10.48□□□□□ -0.73
CTNND1-234ENST00000532844 MAPK8IP3Q9UPT6 1336 aa10.48□□□□□ -0.73
CTNND1-234ENST00000532844 CHAF1AQ13111 956 aaPredicted RBP10.48□□□□□ -0.73
CTNND1-234ENST00000532844 AEBP2Q6ZN18 517 aaPredicted RBP10.48□□□□□ -0.73
CTNND1-234ENST00000532844 SETD5Q9C0A6 1442 aa10.48□□□□□ -0.73
CTNND1-234ENST00000532844 NRDCO43847 1150 aa10.48□□□□□ -0.73
CTNND1-234ENST00000532844 CASC1Q6TDU7 716 aa10.48□□□□□ -0.73
CTNND1-234ENST00000532844 RGS3P49796 1198 aa10.47□□□□□ -0.73
CTNND1-234ENST00000532844 VPS8Q8N3P4 1428 aa10.47□□□□□ -0.73
CTNND1-234ENST00000532844 B4GALNT3Q6L9W6 998 aa10.47□□□□□ -0.73
CTNND1-234ENST00000532844 FRAT1Q92837 279 aaPredicted RBP10.47□□□□□ -0.73
CTNND1-234ENST00000532844 NOP58Q9Y2X3 529 aaKnown RBP10.47□□□□□ -0.73
CTNND1-234ENST00000532844 ARHGAP35Q9NRY4 1499 aa10.47□□□□□ -0.73
CTNND1-234ENST00000532844 CCDC88BA6NC98 1476 aa10.46□□□□□ -0.74
CTNND1-234ENST00000532844 ERCC6Q03468 1493 aa10.46□□□□□ -0.74
CTNND1-234ENST00000532844 CALRP27797 417 aaKnown RBP10.46□□□□□ -0.74
CTNND1-234ENST00000532844 DCAF11Q8TEB1 546 aa10.45□□□□□ -0.74
CTNND1-234ENST00000532844 NUDCQ9Y266 331 aa10.45□□□□□ -0.74
CTNND1-234ENST00000532844 MROH2BQ7Z745 1585 aa10.45□□□□□ -0.74
CTNND1-234ENST00000532844 CCER2I3L3R5 266 aa10.44□□□□□ -0.74
CTNND1-234ENST00000532844 HSPA5P11021 654 aaKnown RBP10.44□□□□□ -0.74
CTNND1-234ENST00000532844 TMF1P82094 1093 aa10.44□□□□□ -0.74
CTNND1-234ENST00000532844 POGKQ9P215 609 aa10.44□□□□□ -0.74
CTNND1-234ENST00000532844 TIMELESSQ9UNS1 1208 aa10.44□□□□□ -0.74
CTNND1-234ENST00000532844 KANK4Q5T7N3 995 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-234ENST00000532844 PLCB2Q00722 1185 aa10.43□□□□□ -0.74
CTNND1-234ENST00000532844 KRI1Q8N9T8 703 aaKnown RBP10.43□□□□□ -0.74
CTNND1-234ENST00000532844 TPRNQ4KMQ1 711 aa10.42□□□□□ -0.74
CTNND1-234ENST00000532844 CLSTN1O94985 981 aa10.42□□□□□ -0.74
CTNND1-234ENST00000532844 U2SURPO15042 1029 aaKnown RBP10.41□□□□□ -0.74
CTNND1-234ENST00000532844 L1TD1Q5T7N2 865 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms