RNA–Protein interactions for RNA: ENST00000532330.5

BRPF3-209, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-209ENST00000532330 TDRD9Q8NDG6 1382 aaKnown RBP16.57■□□□□ 0.24
BRPF3-209ENST00000532330 FYCO1Q9BQS8 1478 aa16.56■□□□□ 0.24
BRPF3-209ENST00000532330 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
BRPF3-209ENST00000532330 CCER1Q8TC90 406 aaPredicted RBP16.55■□□□□ 0.24
BRPF3-209ENST00000532330 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
BRPF3-209ENST00000532330 CASKIN1Q8WXD9 1431 aa16.52■□□□□ 0.24
BRPF3-209ENST00000532330 THOC2Q8NI27 1593 aaKnown RBP16.51■□□□□ 0.23
BRPF3-209ENST00000532330 ADAMTS12P58397 1594 aa16.5■□□□□ 0.23
BRPF3-209ENST00000532330 TIAM1Q13009 1591 aa16.5■□□□□ 0.23
BRPF3-209ENST00000532330 MAGI1Q96QZ7 1491 aaPredicted RBP16.48■□□□□ 0.23
BRPF3-209ENST00000532330 RRBP1Q9P2E9 1410 aaKnown RBP16.46■□□□□ 0.23
BRPF3-209ENST00000532330 CLSPNQ9HAW4 1339 aa16.46■□□□□ 0.23
BRPF3-209ENST00000532330 SAMD9Q5K651 1589 aa16.46■□□□□ 0.22
BRPF3-209ENST00000532330 CFAP43Q8NDM7 1665 aa16.45■□□□□ 0.22
BRPF3-209ENST00000532330 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
BRPF3-209ENST00000532330 IQGAP2Q13576 1575 aa16.43■□□□□ 0.22
BRPF3-209ENST00000532330 CCDC18Q5T9S5 1454 aa16.43■□□□□ 0.22
BRPF3-209ENST00000532330 TTBK1Q5TCY1 1321 aaPredicted RBP16.42■□□□□ 0.22
BRPF3-209ENST00000532330 LRRC9Q6ZRR7 1453 aa16.42■□□□□ 0.22
BRPF3-209ENST00000532330 CCNB3Q8WWL7 1395 aa16.41■□□□□ 0.22
BRPF3-209ENST00000532330 KIAA0586Q9BVV6 1533 aa16.4■□□□□ 0.22
BRPF3-209ENST00000532330 ACIN1Q9UKV3 1341 aaKnown RBP16.4■□□□□ 0.22
BRPF3-209ENST00000532330 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.4■□□□□ 0.22
BRPF3-209ENST00000532330 FHOD3Q2V2M9 1422 aa16.39■□□□□ 0.21
BRPF3-209ENST00000532330 UGGT2Q9NYU1 1516 aa16.38■□□□□ 0.21
BRPF3-209ENST00000532330 PCF11O94913 1555 aaKnown RBP16.38■□□□□ 0.21
BRPF3-209ENST00000532330 SYNJ2O15056 1496 aa16.36■□□□□ 0.21
BRPF3-209ENST00000532330 EIF4G3O43432 1585 aaKnown RBP16.36■□□□□ 0.21
BRPF3-209ENST00000532330 HECW1Q76N89 1606 aa16.35■□□□□ 0.21
BRPF3-209ENST00000532330 GRIN2AQ12879 1464 aa16.34■□□□□ 0.21
BRPF3-209ENST00000532330 SNAPC4Q5SXM2 1469 aa16.34■□□□□ 0.21
BRPF3-209ENST00000532330 ATP1B4Q9UN42 357 aaPredicted RBP16.33■□□□□ 0.2
BRPF3-209ENST00000532330 MTUS2Q5JR59 1369 aa16.33■□□□□ 0.2
BRPF3-209ENST00000532330 HNRNPUL2Q1KMD3 747 aaKnown RBP16.33■□□□□ 0.2
BRPF3-209ENST00000532330 EHBP1L1Q8N3D4 1523 aa16.32■□□□□ 0.2
BRPF3-209ENST00000532330 CARMIL2Q6F5E8 1435 aa16.32■□□□□ 0.2
BRPF3-209ENST00000532330 KANK4Q5T7N3 995 aaPredicted RBP16.32■□□□□ 0.2
BRPF3-209ENST00000532330 CHMP7Q8WUX9 453 aaPredicted RBP16.32■□□□□ 0.2
BRPF3-209ENST00000532330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.32■□□□□ 0.2
BRPF3-209ENST00000532330 CDK11AQ9UQ88 783 aaPredicted RBP16.31■□□□□ 0.2
BRPF3-209ENST00000532330 P3H3Q8IVL6 736 aa16.3■□□□□ 0.2
BRPF3-209ENST00000532330 ZNF608Q9ULD9 1512 aaPredicted RBP16.28■□□□□ 0.2
BRPF3-209ENST00000532330 SUPT6HQ7KZ85 1726 aaKnown RBP16.25■□□□□ 0.19
BRPF3-209ENST00000532330 NUP160Q12769 1436 aa16.22■□□□□ 0.19
BRPF3-209ENST00000532330 KIAA0556O60303 1618 aa16.21■□□□□ 0.19
BRPF3-209ENST00000532330 SETD5Q9C0A6 1442 aa16.18■□□□□ 0.18
BRPF3-209ENST00000532330 MYOM3Q5VTT5 1437 aa16.18■□□□□ 0.18
BRPF3-209ENST00000532330 FGD6Q6ZV73 1430 aa16.17■□□□□ 0.18
BRPF3-209ENST00000532330 MIA2Q96PC5 1412 aa16.17■□□□□ 0.18
BRPF3-209ENST00000532330 FAM50AQ14320 339 aaKnown RBP16.17■□□□□ 0.18
BRPF3-209ENST00000532330 EPRSP07814 1512 aaKnown RBP16.16■□□□□ 0.18
BRPF3-209ENST00000532330 PHLDB1Q86UU1 1377 aa16.15■□□□□ 0.18
BRPF3-209ENST00000532330 NCOA2Q15596 1464 aa16.15■□□□□ 0.18
BRPF3-209ENST00000532330 TIMELESSQ9UNS1 1208 aa16.13■□□□□ 0.17
BRPF3-209ENST00000532330 RAPGEF6Q8TEU7 1601 aa16.12■□□□□ 0.17
BRPF3-209ENST00000532330 DISP1Q96F81 1524 aa16.12■□□□□ 0.17
BRPF3-209ENST00000532330 FBLN2P98095 1184 aa16.11■□□□□ 0.17
BRPF3-209ENST00000532330 CEP170Q5SW79 1584 aa16.1■□□□□ 0.17
BRPF3-209ENST00000532330 JPH4Q96JJ6 628 aa16.1■□□□□ 0.17
BRPF3-209ENST00000532330 ARHGEF11O15085 1522 aa16.09■□□□□ 0.17
BRPF3-209ENST00000532330 DHX57Q6P158 1386 aaKnown RBP16.09■□□□□ 0.17
BRPF3-209ENST00000532330 TCOF1Q13428 1488 aaKnown RBP16.08■□□□□ 0.17
BRPF3-209ENST00000532330 AKNAQ7Z591 1439 aa16.08■□□□□ 0.16
BRPF3-209ENST00000532330 RAB3GAP2Q9H2M9 1393 aa16.05■□□□□ 0.16
BRPF3-209ENST00000532330 ITGAEP38570 1179 aa16.04■□□□□ 0.16
BRPF3-209ENST00000532330 ZNF316A6NFI3 1004 aaPredicted RBP16.03■□□□□ 0.16
BRPF3-209ENST00000532330 PTPN23Q9H3S7 1636 aa16.03■□□□□ 0.16
BRPF3-209ENST00000532330 TROQ12816 1431 aaPredicted RBP16.03■□□□□ 0.16
BRPF3-209ENST00000532330 HFM1A2PYH4 1435 aa16.02■□□□□ 0.15
BRPF3-209ENST00000532330 ITSN2Q9NZM3 1697 aa16■□□□□ 0.15
BRPF3-209ENST00000532330 NUP153P49790 1475 aaKnown RBP16■□□□□ 0.15
BRPF3-209ENST00000532330 PLEKHD1A6NEE1 506 aa16■□□□□ 0.15
BRPF3-209ENST00000532330 PTPRGP23470 1445 aa15.98■□□□□ 0.15
BRPF3-209ENST00000532330 LRRIQ1Q96JM4 1722 aa15.97■□□□□ 0.15
BRPF3-209ENST00000532330 ROCK1Q13464 1354 aa15.97■□□□□ 0.15
BRPF3-209ENST00000532330 ADCY10Q96PN6 1610 aa15.97■□□□□ 0.15
BRPF3-209ENST00000532330 ABCA8O94911 1581 aa15.96■□□□□ 0.15
BRPF3-209ENST00000532330 CDK13Q14004 1512 aaKnown RBP15.96■□□□□ 0.15
BRPF3-209ENST00000532330 PRG4Q92954 1404 aaPredicted RBP15.96■□□□□ 0.15
BRPF3-209ENST00000532330 UACAQ9BZF9 1416 aa15.94■□□□□ 0.14
BRPF3-209ENST00000532330 SHROOM2Q13796 1616 aa15.92■□□□□ 0.14
BRPF3-209ENST00000532330 KIF14Q15058 1648 aa15.92■□□□□ 0.14
BRPF3-209ENST00000532330 RSPH4AQ5TD94 716 aa15.91■□□□□ 0.14
BRPF3-209ENST00000532330 MAGI3Q5TCQ9 1506 aa15.91■□□□□ 0.14
BRPF3-209ENST00000532330 CHD1O14646 1710 aa15.9■□□□□ 0.14
BRPF3-209ENST00000532330 DIEXFQ68CQ4 756 aaKnown RBP15.9■□□□□ 0.14
BRPF3-209ENST00000532330 GCC2Q8IWJ2 1684 aa15.89■□□□□ 0.13
BRPF3-209ENST00000532330 CFDP1Q9UEE9 299 aaPredicted RBP15.89■□□□□ 0.13
BRPF3-209ENST00000532330 PLB1Q6P1J6 1458 aa15.87■□□□□ 0.13
BRPF3-209ENST00000532330 NAIPQ13075 1403 aa15.86■□□□□ 0.13
BRPF3-209ENST00000532330 DNMT1P26358 1616 aaKnown RBP15.86■□□□□ 0.13
BRPF3-209ENST00000532330 DAPK1P53355 1430 aa15.85■□□□□ 0.13
BRPF3-209ENST00000532330 PLEKHH2Q8IVE3 1493 aa15.84■□□□□ 0.13
BRPF3-209ENST00000532330 UHRF1BP1LA0JNW5 1464 aa15.84■□□□□ 0.13
BRPF3-209ENST00000532330 ATP10BO94823 1461 aa15.82■□□□□ 0.12
BRPF3-209ENST00000532330 SHANK2Q9UPX8 1470 aa15.82■□□□□ 0.12
BRPF3-209ENST00000532330 ANKRD30AQ9BXX3 1397 aa15.82■□□□□ 0.12
BRPF3-209ENST00000532330 ABCC2Q92887 1545 aa15.81■□□□□ 0.12
BRPF3-209ENST00000532330 CLASP1Q7Z460 1538 aa15.81■□□□□ 0.12
BRPF3-209ENST00000532330 GPATCH8Q9UKJ3 1502 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms