RNA–Protein interactions for RNA: ENST00000531749.1

LINC02548-201, Transcript of long intergenic non-protein coding RNA 2548, humanhuman

TSL 3 BASIC

Gene LINC02548, Length 484 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02548-201ENST00000531749 FAM69CQ0P6D2 419 aa17.01■□□□□ 0.31
LINC02548-201ENST00000531749 RUSC2Q8N2Y8 1516 aa17.01■□□□□ 0.31
LINC02548-201ENST00000531749 IGF1RP08069 1367 aa17■□□□□ 0.31
LINC02548-201ENST00000531749 ABCC10Q5T3U5 1492 aa16.99■□□□□ 0.31
LINC02548-201ENST00000531749 ADCY10Q96PN6 1610 aa16.96■□□□□ 0.31
LINC02548-201ENST00000531749 KIAA0586Q9BVV6 1533 aa16.93■□□□□ 0.3
LINC02548-201ENST00000531749 NPM1P06748 294 aaKnown RBP eCLIP16.93■□□□□ 0.3
LINC02548-201ENST00000531749 MAPKBP1O60336 1514 aa16.92■□□□□ 0.3
LINC02548-201ENST00000531749 DIP2BQ9P265 1576 aa16.92■□□□□ 0.3
LINC02548-201ENST00000531749 KDM4FA0A1W2PPD8 638 aa16.89■□□□□ 0.29
LINC02548-201ENST00000531749 TSPOAP1O95153 1857 aa16.86■□□□□ 0.29
LINC02548-201ENST00000531749 KIF27Q86VH2 1401 aa16.86■□□□□ 0.29
LINC02548-201ENST00000531749 PTPRGP23470 1445 aa16.83■□□□□ 0.28
LINC02548-201ENST00000531749 TTBK1Q5TCY1 1321 aaPredicted RBP16.83■□□□□ 0.28
LINC02548-201ENST00000531749 CARMIL1Q5VZK9 1371 aa16.83■□□□□ 0.28
LINC02548-201ENST00000531749 CUL7Q14999 1698 aa16.81■□□□□ 0.28
LINC02548-201ENST00000531749 KDM6BO15054 1643 aa16.79■□□□□ 0.28
LINC02548-201ENST00000531749 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.27
LINC02548-201ENST00000531749 PPRC1Q5VV67 1664 aaKnown RBP16.74■□□□□ 0.27
LINC02548-201ENST00000531749 ABCC2Q92887 1545 aa16.74■□□□□ 0.27
LINC02548-201ENST00000531749 ASXL2Q76L83 1435 aa16.73■□□□□ 0.27
LINC02548-201ENST00000531749 DISP1Q96F81 1524 aa16.72■□□□□ 0.27
LINC02548-201ENST00000531749 COL17A1Q9UMD9 1497 aaPredicted RBP16.72■□□□□ 0.27
LINC02548-201ENST00000531749 CARMIL2Q6F5E8 1435 aa16.7■□□□□ 0.26
LINC02548-201ENST00000531749 IQGAP2Q13576 1575 aa16.7■□□□□ 0.26
LINC02548-201ENST00000531749 UHRF1BP1LA0JNW5 1464 aa16.69■□□□□ 0.26
LINC02548-201ENST00000531749 UACAQ9BZF9 1416 aa16.69■□□□□ 0.26
LINC02548-201ENST00000531749 GLI2P10070 1586 aa16.68■□□□□ 0.26
LINC02548-201ENST00000531749 PLB1Q6P1J6 1458 aa16.67■□□□□ 0.26
LINC02548-201ENST00000531749 KDM5BQ9UGL1 1544 aa16.65■□□□□ 0.26
LINC02548-201ENST00000531749 EPRSP07814 1512 aaKnown RBP16.63■□□□□ 0.25
LINC02548-201ENST00000531749 UGGT2Q9NYU1 1516 aa16.62■□□□□ 0.25
LINC02548-201ENST00000531749 RAPGEF2Q9Y4G8 1499 aa16.61■□□□□ 0.25
LINC02548-201ENST00000531749 MAP3K4Q9Y6R4 1608 aa16.59■□□□□ 0.25
LINC02548-201ENST00000531749 ZCCHC11Q5TAX3 1644 aaKnown RBP16.59■□□□□ 0.25
LINC02548-201ENST00000531749 ADGRL1O94910 1474 aa16.58■□□□□ 0.24
LINC02548-201ENST00000531749 KIAA0556O60303 1618 aa16.57■□□□□ 0.24
LINC02548-201ENST00000531749 ILDR1Q86SU0 546 aaPredicted RBP16.56■□□□□ 0.24
LINC02548-201ENST00000531749 WDR7Q9Y4E6 1490 aa16.49■□□□□ 0.23
LINC02548-201ENST00000531749 KCNH8Q96L42 1107 aa16.49■□□□□ 0.23
LINC02548-201ENST00000531749 TEX14Q8IWB6 1497 aa16.48■□□□□ 0.23
LINC02548-201ENST00000531749 ABCA8O94911 1581 aa16.47■□□□□ 0.23
LINC02548-201ENST00000531749 CTTNBP2Q8WZ74 1663 aa16.45■□□□□ 0.22
LINC02548-201ENST00000531749 CD109Q6YHK3 1445 aa16.45■□□□□ 0.22
LINC02548-201ENST00000531749 MAGI3Q5TCQ9 1506 aa16.44■□□□□ 0.22
LINC02548-201ENST00000531749 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
LINC02548-201ENST00000531749 HECW2Q9P2P5 1572 aa16.42■□□□□ 0.22
LINC02548-201ENST00000531749 CFAP43Q8NDM7 1665 aa16.4■□□□□ 0.22
LINC02548-201ENST00000531749 ARID3CA6NKF2 412 aa16.4■□□□□ 0.22
LINC02548-201ENST00000531749 P3H3Q8IVL6 736 aa16.4■□□□□ 0.22
LINC02548-201ENST00000531749 GOLGA3Q08378 1498 aa16.39■□□□□ 0.21
LINC02548-201ENST00000531749 ATP10BO94823 1461 aa16.37■□□□□ 0.21
LINC02548-201ENST00000531749 KIF21BO75037 1637 aa16.33■□□□□ 0.2
LINC02548-201ENST00000531749 ARAP3Q8WWN8 1544 aa16.32■□□□□ 0.2
LINC02548-201ENST00000531749 RAPGEF3O95398 923 aa16.29■□□□□ 0.2
LINC02548-201ENST00000531749 CSRNP3Q8WYN3 585 aa16.27■□□□□ 0.2
LINC02548-201ENST00000531749 ABCA9Q8IUA7 1624 aa16.27■□□□□ 0.19
LINC02548-201ENST00000531749 SAMD9Q5K651 1589 aa16.24■□□□□ 0.19
LINC02548-201ENST00000531749 ADAMTSL3P82987 1691 aa16.23■□□□□ 0.19
LINC02548-201ENST00000531749 RAPGEF6Q8TEU7 1601 aa16.21■□□□□ 0.19
LINC02548-201ENST00000531749 PHLDB1Q86UU1 1377 aa16.21■□□□□ 0.19
LINC02548-201ENST00000531749 PTPRMP28827 1452 aa16.21■□□□□ 0.19
LINC02548-201ENST00000531749 RANGAP1P46060 587 aaPredicted RBP16.2■□□□□ 0.18
LINC02548-201ENST00000531749 NUP153P49790 1475 aaKnown RBP16.2■□□□□ 0.18
LINC02548-201ENST00000531749 FRMPD1Q5SYB0 1578 aa16.2■□□□□ 0.18
LINC02548-201ENST00000531749 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.19■□□□□ 0.18
LINC02548-201ENST00000531749 HNRNPUL2Q1KMD3 747 aaKnown RBP16.19■□□□□ 0.18
LINC02548-201ENST00000531749 NEO1Q92859 1461 aa16.18■□□□□ 0.18
LINC02548-201ENST00000531749 FAM9AQ8IZU1 332 aaPredicted RBP16.16■□□□□ 0.18
LINC02548-201ENST00000531749 FHOD3Q2V2M9 1422 aa16.16■□□□□ 0.18
LINC02548-201ENST00000531749 BCORL1Q5H9F3 1711 aa16.15■□□□□ 0.18
LINC02548-201ENST00000531749 MADDQ8WXG6 1647 aa16.12■□□□□ 0.17
LINC02548-201ENST00000531749 PLEKHD1A6NEE1 506 aa16.12■□□□□ 0.17
LINC02548-201ENST00000531749 FBXO41Q8TF61 875 aa16.12■□□□□ 0.17
LINC02548-201ENST00000531749 ARID4BQ4LE39 1312 aaPredicted RBP16.12■□□□□ 0.17
LINC02548-201ENST00000531749 SIGLEC1Q9BZZ2 1709 aa16.11■□□□□ 0.17
LINC02548-201ENST00000531749 AKNAQ7Z591 1439 aa16.11■□□□□ 0.17
LINC02548-201ENST00000531749 RICTORQ6R327 1708 aa16.1■□□□□ 0.17
LINC02548-201ENST00000531749 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.09■□□□□ 0.17
LINC02548-201ENST00000531749 DENND4BO75064 1496 aaPredicted RBP16.08■□□□□ 0.16
LINC02548-201ENST00000531749 LMTK3Q96Q04 1460 aa16.08■□□□□ 0.16
LINC02548-201ENST00000531749 YEATS2Q9ULM3 1422 aa16.06■□□□□ 0.16
LINC02548-201ENST00000531749 HSPA2P54652 639 aa16.06■□□□□ 0.16
LINC02548-201ENST00000531749 RIMS1Q86UR5 1692 aaKnown RBP16.05■□□□□ 0.16
LINC02548-201ENST00000531749 TTC37Q6PGP7 1564 aa16.05■□□□□ 0.16
LINC02548-201ENST00000531749 FANCAO15360 1455 aa16.05■□□□□ 0.16
LINC02548-201ENST00000531749 PCF11O94913 1555 aaKnown RBP16.04■□□□□ 0.16
LINC02548-201ENST00000531749 ARHGEF40Q8TER5 1519 aa16.04■□□□□ 0.16
LINC02548-201ENST00000531749 CDK13Q14004 1512 aaKnown RBP16.03■□□□□ 0.16
LINC02548-201ENST00000531749 EEA1Q15075 1411 aa16.02■□□□□ 0.16
LINC02548-201ENST00000531749 PLPPR3Q6T4P5 718 aa16.02■□□□□ 0.16
LINC02548-201ENST00000531749 MLECQ14165 292 aa16■□□□□ 0.15
LINC02548-201ENST00000531749 ZMYM4Q5VZL5 1548 aa15.99■□□□□ 0.15
LINC02548-201ENST00000531749 HECW1Q76N89 1606 aa15.99■□□□□ 0.15
LINC02548-201ENST00000531749 PLCH2O75038 1416 aa15.98■□□□□ 0.15
LINC02548-201ENST00000531749 EHMT2Q96KQ7 1210 aa15.98■□□□□ 0.15
LINC02548-201ENST00000531749 SCAPERQ9BY12 1400 aa15.98■□□□□ 0.15
LINC02548-201ENST00000531749 EFCAB5A4FU69 1503 aa15.96■□□□□ 0.15
LINC02548-201ENST00000531749 ZFYVE16Q7Z3T8 1539 aa15.96■□□□□ 0.15
LINC02548-201ENST00000531749 CFAP74Q9C0B2 1584 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms