RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 JPH4Q96JJ6 628 aa32.23■■■□□ 2.75
SCN4B-205ENST00000531550 ABCC10Q5T3U5 1492 aa32.1■■■□□ 2.73
SCN4B-205ENST00000531550 MAPKBP1O60336 1514 aa32.08■■■□□ 2.73
SCN4B-205ENST00000531550 ADCY10Q96PN6 1610 aa32.05■■■□□ 2.72
SCN4B-205ENST00000531550 FAM69CQ0P6D2 419 aa32.04■■■□□ 2.72
SCN4B-205ENST00000531550 DIP2BQ9P265 1576 aa32.03■■■□□ 2.72
SCN4B-205ENST00000531550 NPM1P06748 294 aaKnown RBP eCLIP32.01■■■□□ 2.71
SCN4B-205ENST00000531550 KIAA0586Q9BVV6 1533 aa31.97■■■□□ 2.71
SCN4B-205ENST00000531550 CUL7Q14999 1698 aa31.93■■■□□ 2.7
SCN4B-205ENST00000531550 IGF1RP08069 1367 aa31.91■■■□□ 2.7
SCN4B-205ENST00000531550 KIF27Q86VH2 1401 aa31.88■■■□□ 2.69
SCN4B-205ENST00000531550 KDM6BO15054 1643 aa31.86■■■□□ 2.69
SCN4B-205ENST00000531550 TSPOAP1O95153 1857 aa31.79■■■□□ 2.68
SCN4B-205ENST00000531550 PTPRGP23470 1445 aa31.75■■■□□ 2.67
SCN4B-205ENST00000531550 CARMIL1Q5VZK9 1371 aa31.69■■■□□ 2.66
SCN4B-205ENST00000531550 KDM4FA0A1W2PPD8 638 aa31.68■■■□□ 2.66
SCN4B-205ENST00000531550 ABCC2Q92887 1545 aa31.67■■■□□ 2.66
SCN4B-205ENST00000531550 TNIKQ9UKE5 1360 aa31.66■■■□□ 2.66
SCN4B-205ENST00000531550 CARMIL2Q6F5E8 1435 aa31.66■■■□□ 2.66
SCN4B-205ENST00000531550 TTBK1Q5TCY1 1321 aaPredicted RBP31.64■■■□□ 2.66
SCN4B-205ENST00000531550 IQGAP2Q13576 1575 aa31.63■■■□□ 2.65
SCN4B-205ENST00000531550 ASXL2Q76L83 1435 aa31.59■■■□□ 2.65
SCN4B-205ENST00000531550 PPRC1Q5VV67 1664 aaKnown RBP31.57■■■□□ 2.65
SCN4B-205ENST00000531550 GLI2P10070 1586 aa31.57■■■□□ 2.64
SCN4B-205ENST00000531550 PLB1Q6P1J6 1458 aa31.57■■■□□ 2.64
SCN4B-205ENST00000531550 UHRF1BP1LA0JNW5 1464 aa31.56■■■□□ 2.64
SCN4B-205ENST00000531550 DISP1Q96F81 1524 aa31.51■■■□□ 2.63
SCN4B-205ENST00000531550 UACAQ9BZF9 1416 aa31.5■■■□□ 2.63
SCN4B-205ENST00000531550 UGGT2Q9NYU1 1516 aa31.42■■■□□ 2.62
SCN4B-205ENST00000531550 KDM5BQ9UGL1 1544 aa31.42■■■□□ 2.62
SCN4B-205ENST00000531550 EPRSP07814 1512 aaKnown RBP31.41■■■□□ 2.62
SCN4B-205ENST00000531550 MAP3K4Q9Y6R4 1608 aa31.41■■■□□ 2.62
SCN4B-205ENST00000531550 RAPGEF2Q9Y4G8 1499 aa31.38■■■□□ 2.61
SCN4B-205ENST00000531550 ZCCHC11Q5TAX3 1644 aaKnown RBP31.38■■■□□ 2.61
SCN4B-205ENST00000531550 ADGRL1O94910 1474 aa31.37■■■□□ 2.61
SCN4B-205ENST00000531550 KIAA0556O60303 1618 aa31.37■■■□□ 2.61
SCN4B-205ENST00000531550 COL17A1Q9UMD9 1497 aaPredicted RBP31.35■■■□□ 2.61
SCN4B-205ENST00000531550 TEX14Q8IWB6 1497 aa31.32■■■□□ 2.6
SCN4B-205ENST00000531550 WDR7Q9Y4E6 1490 aa31.22■■■□□ 2.59
SCN4B-205ENST00000531550 CTTNBP2Q8WZ74 1663 aa31.19■■■□□ 2.58
SCN4B-205ENST00000531550 ILDR1Q86SU0 546 aaPredicted RBP31.14■■■□□ 2.58
SCN4B-205ENST00000531550 ABCA8O94911 1581 aa31.1■■■□□ 2.57
SCN4B-205ENST00000531550 GOLGA3Q08378 1498 aa31.09■■■□□ 2.57
SCN4B-205ENST00000531550 CFAP43Q8NDM7 1665 aa31.09■■■□□ 2.57
SCN4B-205ENST00000531550 HECW2Q9P2P5 1572 aa31.09■■■□□ 2.57
SCN4B-205ENST00000531550 MAGI3Q5TCQ9 1506 aa31.08■■■□□ 2.57
SCN4B-205ENST00000531550 CD109Q6YHK3 1445 aa31.06■■■□□ 2.56
SCN4B-205ENST00000531550 KCNH8Q96L42 1107 aa30.98■■■□□ 2.55
SCN4B-205ENST00000531550 PRXQ9BXM0 1461 aa30.95■■■□□ 2.55
SCN4B-205ENST00000531550 KIF21BO75037 1637 aa30.9■■■□□ 2.54
SCN4B-205ENST00000531550 ARAP3Q8WWN8 1544 aa30.84■■■□□ 2.53
SCN4B-205ENST00000531550 ATP10BO94823 1461 aa30.81■■■□□ 2.52
SCN4B-205ENST00000531550 ARID3CA6NKF2 412 aa30.79■■■□□ 2.52
SCN4B-205ENST00000531550 ABCA9Q8IUA7 1624 aa30.77■■■□□ 2.52
SCN4B-205ENST00000531550 P3H3Q8IVL6 736 aa30.75■■■□□ 2.51
SCN4B-205ENST00000531550 FAM9AQ8IZU1 332 aaPredicted RBP30.73■■■□□ 2.51
SCN4B-205ENST00000531550 SAMD9Q5K651 1589 aa30.72■■■□□ 2.51
SCN4B-205ENST00000531550 PHLDB1Q86UU1 1377 aa30.69■■■□□ 2.5
SCN4B-205ENST00000531550 RAPGEF6Q8TEU7 1601 aa30.69■■■□□ 2.5
SCN4B-205ENST00000531550 ADAMTSL3P82987 1691 aa30.66■■■□□ 2.5
SCN4B-205ENST00000531550 NEO1Q92859 1461 aa30.64■■■□□ 2.5
SCN4B-205ENST00000531550 PTPRMP28827 1452 aa30.62■■■□□ 2.49
SCN4B-205ENST00000531550 FRMPD1Q5SYB0 1578 aa30.61■■■□□ 2.49
SCN4B-205ENST00000531550 RAPGEF3O95398 923 aa30.6■■■□□ 2.49
SCN4B-205ENST00000531550 NUP153P49790 1475 aaKnown RBP30.56■■■□□ 2.48
SCN4B-205ENST00000531550 BCORL1Q5H9F3 1711 aa30.56■■■□□ 2.48
SCN4B-205ENST00000531550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.54■■■□□ 2.48
SCN4B-205ENST00000531550 HNRNPUL2Q1KMD3 747 aaKnown RBP30.54■■■□□ 2.48
SCN4B-205ENST00000531550 CSRNP3Q8WYN3 585 aa30.54■■■□□ 2.48
SCN4B-205ENST00000531550 MADDQ8WXG6 1647 aa30.51■■■□□ 2.48
SCN4B-205ENST00000531550 ARHGEF40Q8TER5 1519 aa30.47■■■□□ 2.47
SCN4B-205ENST00000531550 FHOD3Q2V2M9 1422 aa30.47■■■□□ 2.47
SCN4B-205ENST00000531550 FBXO41Q8TF61 875 aa30.45■■■□□ 2.47
SCN4B-205ENST00000531550 ARID4BQ4LE39 1312 aaPredicted RBP30.45■■■□□ 2.46
SCN4B-205ENST00000531550 PCF11O94913 1555 aaKnown RBP30.44■■■□□ 2.46
SCN4B-205ENST00000531550 RICTORQ6R327 1708 aa30.43■■■□□ 2.46
SCN4B-205ENST00000531550 DENND4BO75064 1496 aaPredicted RBP30.41■■■□□ 2.46
SCN4B-205ENST00000531550 RANGAP1P46060 587 aaPredicted RBP30.4■■■□□ 2.46
SCN4B-205ENST00000531550 CFAP74Q9C0B2 1584 aa30.4■■■□□ 2.46
SCN4B-205ENST00000531550 LMTK3Q96Q04 1460 aa30.39■■■□□ 2.46
SCN4B-205ENST00000531550 RIMS1Q86UR5 1692 aaKnown RBP30.39■■■□□ 2.45
SCN4B-205ENST00000531550 EEA1Q15075 1411 aa30.39■■■□□ 2.45
SCN4B-205ENST00000531550 AKNAQ7Z591 1439 aa30.38■■■□□ 2.45
SCN4B-205ENST00000531550 FANCAO15360 1455 aa30.37■■■□□ 2.45
SCN4B-205ENST00000531550 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.37■■■□□ 2.45
SCN4B-205ENST00000531550 PLEKHD1A6NEE1 506 aa30.36■■■□□ 2.45
SCN4B-205ENST00000531550 TTC37Q6PGP7 1564 aa30.34■■■□□ 2.45
SCN4B-205ENST00000531550 ZMYM4Q5VZL5 1548 aa30.32■■■□□ 2.44
SCN4B-205ENST00000531550 EFCAB5A4FU69 1503 aa30.31■■■□□ 2.44
SCN4B-205ENST00000531550 SIGLEC1Q9BZZ2 1709 aa30.27■■■□□ 2.44
SCN4B-205ENST00000531550 ZFYVE16Q7Z3T8 1539 aa30.27■■■□□ 2.44
SCN4B-205ENST00000531550 POGZQ7Z3K3 1410 aa30.24■■■□□ 2.43
SCN4B-205ENST00000531550 YEATS2Q9ULM3 1422 aa30.24■■■□□ 2.43
SCN4B-205ENST00000531550 CDK13Q14004 1512 aaKnown RBP30.22■■■□□ 2.43
SCN4B-205ENST00000531550 MAGI2Q86UL8 1455 aa30.21■■■□□ 2.43
SCN4B-205ENST00000531550 HECW1Q76N89 1606 aa30.2■■■□□ 2.43
SCN4B-205ENST00000531550 HSPA2P54652 639 aa30.16■■■□□ 2.42
SCN4B-205ENST00000531550 PLPPR3Q6T4P5 718 aa30.16■■■□□ 2.42
SCN4B-205ENST00000531550 FER1L4A9Z1Z3 1794 aa30.15■■■□□ 2.42
SCN4B-205ENST00000531550 PLCH2O75038 1416 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms