RNA–Protein interactions for RNA: ENST00000530958.5

ATM-215, Transcript of ATM serine/threonine kinase, humanhuman

TSL 2 BASIC

Gene ATM, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-215ENST00000530958 SENP3-EIF4A1A0A087X0R7 540 aa10.45□□□□□ -0.74
ATM-215ENST00000530958 AEBP2Q6ZN18 517 aaPredicted RBP10.45□□□□□ -0.74
ATM-215ENST00000530958 CUX2O14529 1486 aa10.45□□□□□ -0.74
ATM-215ENST00000530958 MIER1Q8N108 512 aa10.45□□□□□ -0.74
ATM-215ENST00000530958 SIN3AQ96ST3 1273 aa10.45□□□□□ -0.74
ATM-215ENST00000530958 CARMIL1Q5VZK9 1371 aa10.43□□□□□ -0.74
ATM-215ENST00000530958 CEP164Q9UPV0 1460 aa10.43□□□□□ -0.74
ATM-215ENST00000530958 SALL2Q9Y467 1007 aaPredicted RBP10.43□□□□□ -0.74
ATM-215ENST00000530958 ARID4BQ4LE39 1312 aaPredicted RBP10.42□□□□□ -0.74
ATM-215ENST00000530958 ACIN1Q9UKV3 1341 aaKnown RBP10.42□□□□□ -0.74
ATM-215ENST00000530958 RUSC2Q8N2Y8 1516 aa10.42□□□□□ -0.74
ATM-215ENST00000530958 CANXP27824 592 aaKnown RBP10.41□□□□□ -0.74
ATM-215ENST00000530958 PLEKHD1A6NEE1 506 aa10.41□□□□□ -0.74
ATM-215ENST00000530958 RGL3Q3MIN7 710 aa10.4□□□□□ -0.74
ATM-215ENST00000530958 SCAF1Q9H7N4 1312 aaKnown RBP10.4□□□□□ -0.74
ATM-215ENST00000530958 FAM9BQ8IZU0 186 aa10.39□□□□□ -0.75
ATM-215ENST00000530958 CFDP1Q9UEE9 299 aaPredicted RBP10.39□□□□□ -0.75
ATM-215ENST00000530958 BCL11AQ9H165 835 aa10.38□□□□□ -0.75
ATM-215ENST00000530958 ATAD2BQ9ULI0 1458 aa10.37□□□□□ -0.75
ATM-215ENST00000530958 HNRNPUQ00839 825 aaKnown RBP eCLIP10.36□□□□□ -0.75
ATM-215ENST00000530958 C14orf37Q86TY3 774 aa10.34□□□□□ -0.75
ATM-215ENST00000530958 CADPSQ9ULU8 1353 aa10.33□□□□□ -0.76
ATM-215ENST00000530958 A0A0G2JS52 829 aa10.32□□□□□ -0.76
ATM-215ENST00000530958 PPP1R15AO75807 674 aaPredicted RBP10.32□□□□□ -0.76
ATM-215ENST00000530958 FOXD1Q16676 465 aa10.31□□□□□ -0.76
ATM-215ENST00000530958 RAPGEF2Q9Y4G8 1499 aa10.3□□□□□ -0.76
ATM-215ENST00000530958 SMARCA2P51531 1590 aa10.29□□□□□ -0.76
ATM-215ENST00000530958 CCNB3Q8WWL7 1395 aa10.29□□□□□ -0.76
ATM-215ENST00000530958 TOP2AP11388 1531 aaKnown RBP10.29□□□□□ -0.76
ATM-215ENST00000530958 HAP1P54257 671 aaPredicted RBP10.29□□□□□ -0.76
ATM-215ENST00000530958 DNAJC5BQ9UF47 199 aa10.29□□□□□ -0.76
ATM-215ENST00000530958 FKBP8Q14318 412 aa10.29□□□□□ -0.76
ATM-215ENST00000530958 EIF4G1Q04637 1599 aaKnown RBP10.29□□□□□ -0.76
ATM-215ENST00000530958 VPS8Q8N3P4 1428 aa10.28□□□□□ -0.76
ATM-215ENST00000530958 IRX6P78412 446 aaPredicted RBP10.27□□□□□ -0.76
ATM-215ENST00000530958 MRS2Q9HD23 443 aa10.27□□□□□ -0.77
ATM-215ENST00000530958 EIF4G2P78344 907 aaKnown RBP eCLIP10.26□□□□□ -0.77
ATM-215ENST00000530958 SMARCA4P51532 1647 aa10.26□□□□□ -0.77
ATM-215ENST00000530958 PLEKHG5O94827 1062 aa10.25□□□□□ -0.77
ATM-215ENST00000530958 TMC1Q8TDI8 760 aa10.25□□□□□ -0.77
ATM-215ENST00000530958 NPM2Q86SE8 214 aaKnown RBP10.24□□□□□ -0.77
ATM-215ENST00000530958 PDS5BQ9NTI5 1447 aa10.24□□□□□ -0.77
ATM-215ENST00000530958 RTL5Q5HYW3 569 aaPredicted RBP10.23□□□□□ -0.77
ATM-215ENST00000530958 FHOD3Q2V2M9 1422 aa10.23□□□□□ -0.77
ATM-215ENST00000530958 FHAD1B1AJZ9 1412 aa10.2□□□□□ -0.78
ATM-215ENST00000530958 ZBTB7CA1YPR0 619 aa10.18□□□□□ -0.78
ATM-215ENST00000530958 JPH4Q96JJ6 628 aa10.18□□□□□ -0.78
ATM-215ENST00000530958 CARD11Q9BXL7 1154 aa10.18□□□□□ -0.78
ATM-215ENST00000530958 DCAF11Q8TEB1 546 aa10.17□□□□□ -0.78
ATM-215ENST00000530958 MLECQ14165 292 aa10.16□□□□□ -0.78
ATM-215ENST00000530958 FANCD2Q9BXW9 1451 aa10.16□□□□□ -0.78
ATM-215ENST00000530958 RAD54L2Q9Y4B4 1467 aa10.16□□□□□ -0.78
ATM-215ENST00000530958 IGF1RP08069 1367 aa10.16□□□□□ -0.78
ATM-215ENST00000530958 RAB3GAP2Q9H2M9 1393 aa10.15□□□□□ -0.78
ATM-215ENST00000530958 HDGFP51858 240 aaKnown RBP10.14□□□□□ -0.79
ATM-215ENST00000530958 PKD2Q13563 968 aa10.14□□□□□ -0.79
ATM-215ENST00000530958 GGT6Q6P531 493 aa10.14□□□□□ -0.79
ATM-215ENST00000530958 WDR43Q15061 677 aaKnown RBP eCLIP10.14□□□□□ -0.79
ATM-215ENST00000530958 HNRNPMP52272 730 aaKnown RBP eCLIP10.14□□□□□ -0.796e-7■■■□□ 18.1
ATM-215ENST00000530958 TNNT2P45379 298 aaPredicted RBP10.11□□□□□ -0.79
ATM-215ENST00000530958 KANK1Q14678 1352 aa10.11□□□□□ -0.79
ATM-215ENST00000530958 NESP48681 1621 aa10.11□□□□□ -0.79
ATM-215ENST00000530958 SETD5Q9C0A6 1442 aa10.1□□□□□ -0.79
ATM-215ENST00000530958 SAFB2Q14151 953 aaKnown RBP eCLIP10.1□□□□□ -0.79
ATM-215ENST00000530958 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.1□□□□□ -0.79
ATM-215ENST00000530958 MPHOSPH9Q99550 1183 aa10.1□□□□□ -0.79
ATM-215ENST00000530958 CDCA8Q53HL2 280 aa10.1□□□□□ -0.79
ATM-215ENST00000530958 FGD5Q6ZNL6 1462 aa10.09□□□□□ -0.79
ATM-215ENST00000530958 NCAPD3P42695 1498 aa10.08□□□□□ -0.8
ATM-215ENST00000530958 ARHGAP35Q9NRY4 1499 aa10.08□□□□□ -0.8
ATM-215ENST00000530958 NEUROD2Q15784 382 aa10.08□□□□□ -0.8
ATM-215ENST00000530958 CARMIL2Q6F5E8 1435 aa10.08□□□□□ -0.8
ATM-215ENST00000530958 PPM1GO15355 546 aaPredicted RBP10.08□□□□□ -0.8
ATM-215ENST00000530958 FMN1Q68DA7 1419 aa10.08□□□□□ -0.8
ATM-215ENST00000530958 ZNF644Q9H582 1327 aaPredicted RBP10.08□□□□□ -0.8
ATM-215ENST00000530958 AQRO60306 1485 aaKnown RBP eCLIP10.08□□□□□ -0.8
ATM-215ENST00000530958 L3MBTL2Q969R5 705 aa10.07□□□□□ -0.8
ATM-215ENST00000530958 SUPT16HQ9Y5B9 1047 aaKnown RBP10.07□□□□□ -0.8
ATM-215ENST00000530958 HSPA5P11021 654 aaKnown RBP10.06□□□□□ -0.8
ATM-215ENST00000530958 CC2D1BQ5T0F9 858 aaKnown RBP10.06□□□□□ -0.8
ATM-215ENST00000530958 NUP155O75694 1391 aa10.06□□□□□ -0.8
ATM-215ENST00000530958 CCDC136Q96JN2 1154 aa10.05□□□□□ -0.8
ATM-215ENST00000530958 CFAP53Q96M91 514 aa10.05□□□□□ -0.8
ATM-215ENST00000530958 MYH16Q9H6N6 1097 aa10.05□□□□□ -0.8
ATM-215ENST00000530958 UPF2Q9HAU5 1272 aaKnown RBP10.04□□□□□ -0.8
ATM-215ENST00000530958 POGKQ9P215 609 aa10.04□□□□□ -0.8
ATM-215ENST00000530958 KIF3BO15066 747 aa10.04□□□□□ -0.8
ATM-215ENST00000530958 NUTM2DQ5VT03 806 aaPredicted RBP10.04□□□□□ -0.8
ATM-215ENST00000530958 CYB5RLQ6IPT4 315 aa10.03□□□□□ -0.8
ATM-215ENST00000530958 LMOD2Q6P5Q4 547 aa10.03□□□□□ -0.8
ATM-215ENST00000530958 EFCAB2Q5VUJ9 269 aa10.03□□□□□ -0.8
ATM-215ENST00000530958 KNSTRNQ9Y448 316 aa10.03□□□□□ -0.8
ATM-215ENST00000530958 STK26Q9P289 416 aa10.01□□□□□ -0.81
ATM-215ENST00000530958 HSP90AA1P07900 732 aaKnown RBP10.01□□□□□ -0.81
ATM-215ENST00000530958 GAPVD1Q14C86 1478 aa10□□□□□ -0.81
ATM-215ENST00000530958 DHX57Q6P158 1386 aaKnown RBP10□□□□□ -0.81
ATM-215ENST00000530958 SOX12O15370 315 aa10□□□□□ -0.81
ATM-215ENST00000530958 NPHP1O15259 732 aa9.99□□□□□ -0.81
ATM-215ENST00000530958 SYNJ1O43426 1573 aa9.98□□□□□ -0.81
ATM-215ENST00000530958 PHLDB1Q86UU1 1377 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms