RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 TOP2BQ02880 1626 aa9.71□□□□□ -0.86
VPS11-204ENST00000530809 MAPKBP1O60336 1514 aa9.7□□□□□ -0.86
VPS11-204ENST00000530809 DIP2BQ9P265 1576 aa9.68□□□□□ -0.86
VPS11-204ENST00000530809 ABCC10Q5T3U5 1492 aa9.68□□□□□ -0.86
VPS11-204ENST00000530809 KDM6BO15054 1643 aa9.67□□□□□ -0.86
VPS11-204ENST00000530809 RUSC2Q8N2Y8 1516 aa9.66□□□□□ -0.86
VPS11-204ENST00000530809 PRG4Q92954 1404 aaPredicted RBP9.66□□□□□ -0.86
VPS11-204ENST00000530809 ADCY10Q96PN6 1610 aa9.64□□□□□ -0.87
VPS11-204ENST00000530809 TSPOAP1O95153 1857 aa9.64□□□□□ -0.87
VPS11-204ENST00000530809 NPM1P06748 294 aaKnown RBP eCLIP9.64□□□□□ -0.87
VPS11-204ENST00000530809 FAM69CQ0P6D2 419 aa9.62□□□□□ -0.87
VPS11-204ENST00000530809 JPH4Q96JJ6 628 aa9.61□□□□□ -0.87
VPS11-204ENST00000530809 CUL7Q14999 1698 aa9.58□□□□□ -0.88
VPS11-204ENST00000530809 KDM4FA0A1W2PPD8 638 aa9.56□□□□□ -0.88
VPS11-204ENST00000530809 KIAA0586Q9BVV6 1533 aa9.56□□□□□ -0.88
VPS11-204ENST00000530809 PPRC1Q5VV67 1664 aaKnown RBP9.54□□□□□ -0.88
VPS11-204ENST00000530809 GLI2P10070 1586 aa9.54□□□□□ -0.88
VPS11-204ENST00000530809 ILDR1Q86SU0 546 aaPredicted RBP9.52□□□□□ -0.89
VPS11-204ENST00000530809 ABCC2Q92887 1545 aa9.51□□□□□ -0.89
VPS11-204ENST00000530809 ADGRL1O94910 1474 aa9.5□□□□□ -0.89
VPS11-204ENST00000530809 PLB1Q6P1J6 1458 aa9.5□□□□□ -0.89
VPS11-204ENST00000530809 FOXD1Q16676 465 aa9.49□□□□□ -0.89
VPS11-204ENST00000530809 MAP3K4Q9Y6R4 1608 aa9.49□□□□□ -0.89
VPS11-204ENST00000530809 CARMIL2Q6F5E8 1435 aa9.48□□□□□ -0.89
VPS11-204ENST00000530809 PTPRGP23470 1445 aa9.48□□□□□ -0.89
VPS11-204ENST00000530809 HECW2Q9P2P5 1572 aa9.47□□□□□ -0.89
VPS11-204ENST00000530809 ASXL2Q76L83 1435 aa9.47□□□□□ -0.89
VPS11-204ENST00000530809 UHRF1BP1LA0JNW5 1464 aa9.47□□□□□ -0.89
VPS11-204ENST00000530809 TEX14Q8IWB6 1497 aa9.47□□□□□ -0.89
VPS11-204ENST00000530809 IQGAP2Q13576 1575 aa9.46□□□□□ -0.89
VPS11-204ENST00000530809 SUPT5HO00267 1087 aaKnown RBP9.46□□□□□ -0.9
VPS11-204ENST00000530809 TNIKQ9UKE5 1360 aa9.46□□□□□ -0.9
VPS11-204ENST00000530809 KIF27Q86VH2 1401 aa9.46□□□□□ -0.9
VPS11-204ENST00000530809 IGF1RP08069 1367 aa9.44□□□□□ -0.9
VPS11-204ENST00000530809 ZCCHC11Q5TAX3 1644 aaKnown RBP9.43□□□□□ -0.9
VPS11-204ENST00000530809 EPRSP07814 1512 aaKnown RBP9.42□□□□□ -0.9
VPS11-204ENST00000530809 KDM5BQ9UGL1 1544 aa9.42□□□□□ -0.9
VPS11-204ENST00000530809 UACAQ9BZF9 1416 aa9.41□□□□□ -0.9
VPS11-204ENST00000530809 CFAP43Q8NDM7 1665 aa9.41□□□□□ -0.9
VPS11-204ENST00000530809 CARMIL1Q5VZK9 1371 aa9.39□□□□□ -0.91
VPS11-204ENST00000530809 COL17A1Q9UMD9 1497 aaPredicted RBP9.39□□□□□ -0.91
VPS11-204ENST00000530809 DISP1Q96F81 1524 aa9.38□□□□□ -0.91
VPS11-204ENST00000530809 KIAA0556O60303 1618 aa9.38□□□□□ -0.91
VPS11-204ENST00000530809 TTBK1Q5TCY1 1321 aaPredicted RBP9.37□□□□□ -0.91
VPS11-204ENST00000530809 UGGT2Q9NYU1 1516 aa9.37□□□□□ -0.91
VPS11-204ENST00000530809 CTTNBP2Q8WZ74 1663 aa9.36□□□□□ -0.91
VPS11-204ENST00000530809 WDR7Q9Y4E6 1490 aa9.36□□□□□ -0.91
VPS11-204ENST00000530809 MAGI3Q5TCQ9 1506 aa9.35□□□□□ -0.91
VPS11-204ENST00000530809 KIF21BO75037 1637 aa9.34□□□□□ -0.91
VPS11-204ENST00000530809 ADRA2BP18089 450 aa9.34□□□□□ -0.91
VPS11-204ENST00000530809 PPP6R1Q9UPN7 881 aa9.32□□□□□ -0.92
VPS11-204ENST00000530809 RAPGEF2Q9Y4G8 1499 aa9.32□□□□□ -0.92
VPS11-204ENST00000530809 FBXO41Q8TF61 875 aa9.31□□□□□ -0.92
VPS11-204ENST00000530809 CD109Q6YHK3 1445 aa9.31□□□□□ -0.92
VPS11-204ENST00000530809 ABCA8O94911 1581 aa9.29□□□□□ -0.92
VPS11-204ENST00000530809 GOLGA3Q08378 1498 aa9.29□□□□□ -0.92
VPS11-204ENST00000530809 ADAMTSL3P82987 1691 aa9.29□□□□□ -0.92
VPS11-204ENST00000530809 ARAP3Q8WWN8 1544 aa9.28□□□□□ -0.92
VPS11-204ENST00000530809 ABCA9Q8IUA7 1624 aa9.26□□□□□ -0.93
VPS11-204ENST00000530809 BCORL1Q5H9F3 1711 aa9.25□□□□□ -0.93
VPS11-204ENST00000530809 PHLDB1Q86UU1 1377 aa9.24□□□□□ -0.93
VPS11-204ENST00000530809 PTPRMP28827 1452 aa9.24□□□□□ -0.93
VPS11-204ENST00000530809 PCF11O94913 1555 aaKnown RBP9.24□□□□□ -0.93
VPS11-204ENST00000530809 MADDQ8WXG6 1647 aa9.22□□□□□ -0.93
VPS11-204ENST00000530809 FAM9AQ8IZU1 332 aaPredicted RBP9.21□□□□□ -0.94
VPS11-204ENST00000530809 KCNH8Q96L42 1107 aa9.21□□□□□ -0.94
VPS11-204ENST00000530809 NEO1Q92859 1461 aa9.21□□□□□ -0.94
VPS11-204ENST00000530809 RIMS1Q86UR5 1692 aaKnown RBP9.2□□□□□ -0.94
VPS11-204ENST00000530809 LMTK3Q96Q04 1460 aa9.19□□□□□ -0.94
VPS11-204ENST00000530809 FRMPD1Q5SYB0 1578 aa9.19□□□□□ -0.94
VPS11-204ENST00000530809 CFAP74Q9C0B2 1584 aa9.19□□□□□ -0.94
VPS11-204ENST00000530809 RICTORQ6R327 1708 aa9.18□□□□□ -0.94
VPS11-204ENST00000530809 ARHGEF40Q8TER5 1519 aa9.18□□□□□ -0.94
VPS11-204ENST00000530809 RAPGEF6Q8TEU7 1601 aa9.17□□□□□ -0.94
VPS11-204ENST00000530809 ATP10BO94823 1461 aa9.16□□□□□ -0.94
VPS11-204ENST00000530809 SAMD9Q5K651 1589 aa9.15□□□□□ -0.95
VPS11-204ENST00000530809 FER1L4A9Z1Z3 1794 aa9.14□□□□□ -0.95
VPS11-204ENST00000530809 FANCAO15360 1455 aa9.14□□□□□ -0.95
VPS11-204ENST00000530809 PRXQ9BXM0 1461 aa9.14□□□□□ -0.95
VPS11-204ENST00000530809 ARID4BQ4LE39 1312 aaPredicted RBP9.13□□□□□ -0.95
VPS11-204ENST00000530809 ZMYM4Q5VZL5 1548 aa9.13□□□□□ -0.95
VPS11-204ENST00000530809 POGZQ7Z3K3 1410 aa9.13□□□□□ -0.95
VPS11-204ENST00000530809 EFCAB5A4FU69 1503 aa9.12□□□□□ -0.95
VPS11-204ENST00000530809 RAPGEF3O95398 923 aa9.12□□□□□ -0.95
VPS11-204ENST00000530809 PREX1Q8TCU6 1659 aa9.12□□□□□ -0.95
VPS11-204ENST00000530809 TTC37Q6PGP7 1564 aa9.12□□□□□ -0.95
VPS11-204ENST00000530809 DENND4BO75064 1496 aaPredicted RBP9.11□□□□□ -0.95
VPS11-204ENST00000530809 FHOD3Q2V2M9 1422 aa9.1□□□□□ -0.95
VPS11-204ENST00000530809 AKNAQ7Z591 1439 aa9.1□□□□□ -0.95
VPS11-204ENST00000530809 ZFYVE16Q7Z3T8 1539 aa9.1□□□□□ -0.95
VPS11-204ENST00000530809 MAGI2Q86UL8 1455 aa9.09□□□□□ -0.95
VPS11-204ENST00000530809 SIGLEC1Q9BZZ2 1709 aa9.08□□□□□ -0.96
VPS11-204ENST00000530809 CERKQ8TCT0 537 aa9.08□□□□□ -0.96
VPS11-204ENST00000530809 NUP153P49790 1475 aaKnown RBP9.08□□□□□ -0.96
VPS11-204ENST00000530809 ARID3CA6NKF2 412 aa9.07□□□□□ -0.96
VPS11-204ENST00000530809 SETD1BQ9UPS6 1966 aaKnown RBP9.06□□□□□ -0.96
VPS11-204ENST00000530809 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.06□□□□□ -0.96
VPS11-204ENST00000530809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.06□□□□□ -0.96
VPS11-204ENST00000530809 HNRNPUL2Q1KMD3 747 aaKnown RBP9.06□□□□□ -0.96
VPS11-204ENST00000530809 HECW1Q76N89 1606 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms