RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 KIF13AQ9H1H9 1805 aa23.85■■□□□ 1.41
CTSB-217ENST00000530296 RUSC2Q8N2Y8 1516 aa23.84■■□□□ 1.41
CTSB-217ENST00000530296 MAPKBP1O60336 1514 aa23.79■■□□□ 1.4
CTSB-217ENST00000530296 KIF27Q86VH2 1401 aa23.78■■□□□ 1.4
CTSB-217ENST00000530296 ABCC10Q5T3U5 1492 aa23.78■■□□□ 1.4
CTSB-217ENST00000530296 KIAA0586Q9BVV6 1533 aa23.77■■□□□ 1.4
CTSB-217ENST00000530296 FAM69CQ0P6D2 419 aa23.75■■□□□ 1.39
CTSB-217ENST00000530296 CUL7Q14999 1698 aa23.73■■□□□ 1.39
CTSB-217ENST00000530296 IGF1RP08069 1367 aa23.69■■□□□ 1.38
CTSB-217ENST00000530296 ADCY10Q96PN6 1610 aa23.68■■□□□ 1.38
CTSB-217ENST00000530296 DIP2BQ9P265 1576 aa23.67■■□□□ 1.38
CTSB-217ENST00000530296 CARMIL2Q6F5E8 1435 aa23.59■■□□□ 1.37
CTSB-217ENST00000530296 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.37
CTSB-217ENST00000530296 PTPRGP23470 1445 aa23.58■■□□□ 1.36
CTSB-217ENST00000530296 KDM6BO15054 1643 aa23.56■■□□□ 1.36
CTSB-217ENST00000530296 CARMIL1Q5VZK9 1371 aa23.56■■□□□ 1.36
CTSB-217ENST00000530296 TNIKQ9UKE5 1360 aa23.53■■□□□ 1.36
CTSB-217ENST00000530296 ABCC2Q92887 1545 aa23.49■■□□□ 1.35
CTSB-217ENST00000530296 EEA1Q15075 1411 aa23.49■■□□□ 1.35
CTSB-217ENST00000530296 PLB1Q6P1J6 1458 aa23.48■■□□□ 1.35
CTSB-217ENST00000530296 IQGAP2Q13576 1575 aa23.47■■□□□ 1.35
CTSB-217ENST00000530296 TSPOAP1O95153 1857 aa23.47■■□□□ 1.35
CTSB-217ENST00000530296 UHRF1BP1LA0JNW5 1464 aa23.45■■□□□ 1.34
CTSB-217ENST00000530296 GLI2P10070 1586 aa23.42■■□□□ 1.34
CTSB-217ENST00000530296 ASXL2Q76L83 1435 aa23.41■■□□□ 1.34
CTSB-217ENST00000530296 UACAQ9BZF9 1416 aa23.39■■□□□ 1.33
CTSB-217ENST00000530296 RAPGEF2Q9Y4G8 1499 aa23.38■■□□□ 1.33
CTSB-217ENST00000530296 TTBK1Q5TCY1 1321 aaPredicted RBP23.37■■□□□ 1.33
CTSB-217ENST00000530296 KDM4FA0A1W2PPD8 638 aa23.37■■□□□ 1.33
CTSB-217ENST00000530296 CSRNP3Q8WYN3 585 aa23.37■■□□□ 1.33
CTSB-217ENST00000530296 DISP1Q96F81 1524 aa23.33■■□□□ 1.32
CTSB-217ENST00000530296 UGGT2Q9NYU1 1516 aa23.33■■□□□ 1.32
CTSB-217ENST00000530296 KDM5BQ9UGL1 1544 aa23.32■■□□□ 1.32
CTSB-217ENST00000530296 PRXQ9BXM0 1461 aa23.31■■□□□ 1.32
CTSB-217ENST00000530296 TEX14Q8IWB6 1497 aa23.3■■□□□ 1.32
CTSB-217ENST00000530296 PPRC1Q5VV67 1664 aaKnown RBP23.28■■□□□ 1.32
CTSB-217ENST00000530296 EPRSP07814 1512 aaKnown RBP23.26■■□□□ 1.31
CTSB-217ENST00000530296 FAM9AQ8IZU1 332 aaPredicted RBP23.25■■□□□ 1.31
CTSB-217ENST00000530296 MAP3K4Q9Y6R4 1608 aa23.24■■□□□ 1.31
CTSB-217ENST00000530296 KIAA0556O60303 1618 aa23.23■■□□□ 1.31
CTSB-217ENST00000530296 ZCCHC11Q5TAX3 1644 aaKnown RBP23.21■■□□□ 1.31
CTSB-217ENST00000530296 GOLGA3Q08378 1498 aa23.18■■□□□ 1.3
CTSB-217ENST00000530296 WDR7Q9Y4E6 1490 aa23.17■■□□□ 1.3
CTSB-217ENST00000530296 ADGRL1O94910 1474 aa23.16■■□□□ 1.3
CTSB-217ENST00000530296 KIF21BO75037 1637 aa23.15■■□□□ 1.3
CTSB-217ENST00000530296 CTTNBP2Q8WZ74 1663 aa23.13■■□□□ 1.29
CTSB-217ENST00000530296 COL17A1Q9UMD9 1497 aaPredicted RBP23.11■■□□□ 1.29
CTSB-217ENST00000530296 MAGI3Q5TCQ9 1506 aa23.08■■□□□ 1.28
CTSB-217ENST00000530296 CFAP43Q8NDM7 1665 aa23.07■■□□□ 1.28
CTSB-217ENST00000530296 CD109Q6YHK3 1445 aa23.06■■□□□ 1.28
CTSB-217ENST00000530296 ABCA8O94911 1581 aa23.04■■□□□ 1.28
CTSB-217ENST00000530296 UBTFP17480 764 aaKnown RBP22.98■■□□□ 1.27
CTSB-217ENST00000530296 KCNH8Q96L42 1107 aa22.97■■□□□ 1.27
CTSB-217ENST00000530296 PHLDB1Q86UU1 1377 aa22.93■■□□□ 1.26
CTSB-217ENST00000530296 ILDR1Q86SU0 546 aaPredicted RBP22.92■■□□□ 1.26
CTSB-217ENST00000530296 HECW2Q9P2P5 1572 aa22.91■■□□□ 1.26
CTSB-217ENST00000530296 ARAP3Q8WWN8 1544 aa22.9■■□□□ 1.26
CTSB-217ENST00000530296 EHMT2Q96KQ7 1210 aa22.88■■□□□ 1.25
CTSB-217ENST00000530296 ATP10BO94823 1461 aa22.84■■□□□ 1.25
CTSB-217ENST00000530296 SAMD9Q5K651 1589 aa22.83■■□□□ 1.25
CTSB-217ENST00000530296 EFCAB5A4FU69 1503 aa22.82■■□□□ 1.24
CTSB-217ENST00000530296 ABCA9Q8IUA7 1624 aa22.82■■□□□ 1.24
CTSB-217ENST00000530296 RANGAP1P46060 587 aaPredicted RBP22.79■■□□□ 1.24
CTSB-217ENST00000530296 NEO1Q92859 1461 aa22.78■■□□□ 1.24
CTSB-217ENST00000530296 P3H3Q8IVL6 736 aa22.76■■□□□ 1.23
CTSB-217ENST00000530296 RAPGEF6Q8TEU7 1601 aa22.75■■□□□ 1.23
CTSB-217ENST00000530296 ARID3CA6NKF2 412 aa22.71■■□□□ 1.23
CTSB-217ENST00000530296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.71■■□□□ 1.23
CTSB-217ENST00000530296 HNRNPUL2Q1KMD3 747 aaKnown RBP22.71■■□□□ 1.23
CTSB-217ENST00000530296 FHOD3Q2V2M9 1422 aa22.68■■□□□ 1.22
CTSB-217ENST00000530296 ADAMTSL3P82987 1691 aa22.67■■□□□ 1.22
CTSB-217ENST00000530296 PTPRMP28827 1452 aa22.66■■□□□ 1.22
CTSB-217ENST00000530296 ARHGAP35Q9NRY4 1499 aa22.66■■□□□ 1.22
CTSB-217ENST00000530296 PLEKHD1A6NEE1 506 aa22.65■■□□□ 1.22
CTSB-217ENST00000530296 RAPGEF3O95398 923 aa22.65■■□□□ 1.22
CTSB-217ENST00000530296 NUP153P49790 1475 aaKnown RBP22.64■■□□□ 1.21
CTSB-217ENST00000530296 FMN1Q68DA7 1419 aa22.64■■□□□ 1.21
CTSB-217ENST00000530296 CLIP1P30622 1438 aa22.62■■□□□ 1.21
CTSB-217ENST00000530296 CFAP74Q9C0B2 1584 aa22.61■■□□□ 1.21
CTSB-217ENST00000530296 ARID4BQ4LE39 1312 aaPredicted RBP22.6■■□□□ 1.21
CTSB-217ENST00000530296 BCORL1Q5H9F3 1711 aa22.6■■□□□ 1.21
CTSB-217ENST00000530296 DENND4BO75064 1496 aaPredicted RBP22.59■■□□□ 1.21
CTSB-217ENST00000530296 FBXO41Q8TF61 875 aa22.58■■□□□ 1.21
CTSB-217ENST00000530296 FRMPD1Q5SYB0 1578 aa22.58■■□□□ 1.2
CTSB-217ENST00000530296 LOC105371045A0A1W2PR82 267 aa22.57■■□□□ 1.2
CTSB-217ENST00000530296 AKNAQ7Z591 1439 aa22.55■■□□□ 1.2
CTSB-217ENST00000530296 FANCAO15360 1455 aa22.54■■□□□ 1.2
CTSB-217ENST00000530296 ARHGEF40Q8TER5 1519 aa22.54■■□□□ 1.2
CTSB-217ENST00000530296 CEP162Q5TB80 1403 aa22.54■■□□□ 1.2
CTSB-217ENST00000530296 POGZQ7Z3K3 1410 aa22.54■■□□□ 1.2
CTSB-217ENST00000530296 RICTORQ6R327 1708 aa22.52■■□□□ 1.2
CTSB-217ENST00000530296 PCF11O94913 1555 aaKnown RBP22.51■■□□□ 1.19
CTSB-217ENST00000530296 MADDQ8WXG6 1647 aa22.51■■□□□ 1.19
CTSB-217ENST00000530296 MAGI2Q86UL8 1455 aa22.51■■□□□ 1.19
CTSB-217ENST00000530296 ZMYM4Q5VZL5 1548 aa22.49■■□□□ 1.19
CTSB-217ENST00000530296 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.49■■□□□ 1.195e-6■□□□□ 9.5
CTSB-217ENST00000530296 HECW1Q76N89 1606 aa22.47■■□□□ 1.19
CTSB-217ENST00000530296 LMTK3Q96Q04 1460 aa22.45■■□□□ 1.18
CTSB-217ENST00000530296 ATP1B4Q9UN42 357 aaPredicted RBP22.44■■□□□ 1.18
CTSB-217ENST00000530296 ZFYVE16Q7Z3T8 1539 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms