RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 ABCC10Q5T3U5 1492 aa10.23□□□□□ -0.77
CTSB-216ENST00000530290 RUSC2Q8N2Y8 1516 aa10.21□□□□□ -0.78
CTSB-216ENST00000530290 PRG4Q92954 1404 aaPredicted RBP10.2□□□□□ -0.78
CTSB-216ENST00000530290 DIP2BQ9P265 1576 aa10.2□□□□□ -0.78
CTSB-216ENST00000530290 FBXO41Q8TF61 875 aa10.18□□□□□ -0.78
CTSB-216ENST00000530290 KDM6BO15054 1643 aa10.18□□□□□ -0.78
CTSB-216ENST00000530290 NPM1P06748 294 aaKnown RBP eCLIP10.17□□□□□ -0.78
CTSB-216ENST00000530290 JPH4Q96JJ6 628 aa10.15□□□□□ -0.78
CTSB-216ENST00000530290 ADCY10Q96PN6 1610 aa10.15□□□□□ -0.79
CTSB-216ENST00000530290 FAM69CQ0P6D2 419 aa10.14□□□□□ -0.79
CTSB-216ENST00000530290 CUL7Q14999 1698 aa10.12□□□□□ -0.79
CTSB-216ENST00000530290 HECW2Q9P2P5 1572 aa10.11□□□□□ -0.79
CTSB-216ENST00000530290 KIAA0586Q9BVV6 1533 aa10.11□□□□□ -0.79
CTSB-216ENST00000530290 TSPOAP1O95153 1857 aa10.1□□□□□ -0.79
CTSB-216ENST00000530290 ILDR2Q71H61 639 aa10.09□□□□□ -0.79
CTSB-216ENST00000530290 LMTK3Q96Q04 1460 aa10.09□□□□□ -0.79
CTSB-216ENST00000530290 SOCS7O14512 581 aa10.08□□□□□ -0.8
CTSB-216ENST00000530290 GLI2P10070 1586 aa10.08□□□□□ -0.8
CTSB-216ENST00000530290 PLB1Q6P1J6 1458 aa10.06□□□□□ -0.8
CTSB-216ENST00000530290 ABCC2Q92887 1545 aa10.05□□□□□ -0.8
CTSB-216ENST00000530290 CARMIL2Q6F5E8 1435 aa10.04□□□□□ -0.8
CTSB-216ENST00000530290 KIF27Q86VH2 1401 aa10.04□□□□□ -0.8
CTSB-216ENST00000530290 ADGRL1O94910 1474 aa10.04□□□□□ -0.8
CTSB-216ENST00000530290 UHRF1BP1LA0JNW5 1464 aa10.03□□□□□ -0.8
CTSB-216ENST00000530290 PTPRGP23470 1445 aa10.02□□□□□ -0.81
CTSB-216ENST00000530290 TEX14Q8IWB6 1497 aa10.02□□□□□ -0.81
CTSB-216ENST00000530290 PPRC1Q5VV67 1664 aaKnown RBP10.02□□□□□ -0.81
CTSB-216ENST00000530290 TNIKQ9UKE5 1360 aa10.01□□□□□ -0.81
CTSB-216ENST00000530290 IQGAP2Q13576 1575 aa10□□□□□ -0.81
CTSB-216ENST00000530290 ASXL2Q76L83 1435 aa9.99□□□□□ -0.81
CTSB-216ENST00000530290 MAP3K4Q9Y6R4 1608 aa9.99□□□□□ -0.81
CTSB-216ENST00000530290 IGF1RP08069 1367 aa9.99□□□□□ -0.81
CTSB-216ENST00000530290 SUPT5HO00267 1087 aaKnown RBP9.97□□□□□ -0.81
CTSB-216ENST00000530290 KDM5BQ9UGL1 1544 aa9.97□□□□□ -0.81
CTSB-216ENST00000530290 UACAQ9BZF9 1416 aa9.96□□□□□ -0.82
CTSB-216ENST00000530290 EPRSP07814 1512 aaKnown RBP9.95□□□□□ -0.82
CTSB-216ENST00000530290 CARMIL1Q5VZK9 1371 aa9.94□□□□□ -0.82
CTSB-216ENST00000530290 UGGT2Q9NYU1 1516 aa9.92□□□□□ -0.82
CTSB-216ENST00000530290 ZCCHC11Q5TAX3 1644 aaKnown RBP9.92□□□□□ -0.82
CTSB-216ENST00000530290 CFAP43Q8NDM7 1665 aa9.91□□□□□ -0.82
CTSB-216ENST00000530290 DISP1Q96F81 1524 aa9.91□□□□□ -0.82
CTSB-216ENST00000530290 WDR7Q9Y4E6 1490 aa9.91□□□□□ -0.82
CTSB-216ENST00000530290 KIAA0556O60303 1618 aa9.9□□□□□ -0.82
CTSB-216ENST00000530290 MAGI3Q5TCQ9 1506 aa9.9□□□□□ -0.82
CTSB-216ENST00000530290 DISP3Q9P2K9 1392 aa9.89□□□□□ -0.83
CTSB-216ENST00000530290 COL17A1Q9UMD9 1497 aaPredicted RBP9.88□□□□□ -0.83
CTSB-216ENST00000530290 RAPGEF2Q9Y4G8 1499 aa9.86□□□□□ -0.83
CTSB-216ENST00000530290 GOLGA3Q08378 1498 aa9.85□□□□□ -0.83
CTSB-216ENST00000530290 CTTNBP2Q8WZ74 1663 aa9.84□□□□□ -0.83
CTSB-216ENST00000530290 PHLDB1Q86UU1 1377 aa9.83□□□□□ -0.84
CTSB-216ENST00000530290 CD109Q6YHK3 1445 aa9.82□□□□□ -0.84
CTSB-216ENST00000530290 ARAP3Q8WWN8 1544 aa9.82□□□□□ -0.84
CTSB-216ENST00000530290 TTBK1Q5TCY1 1321 aaPredicted RBP9.82□□□□□ -0.84
CTSB-216ENST00000530290 ABCA8O94911 1581 aa9.81□□□□□ -0.84
CTSB-216ENST00000530290 KIF21BO75037 1637 aa9.8□□□□□ -0.84
CTSB-216ENST00000530290 FAM9AQ8IZU1 332 aaPredicted RBP9.78□□□□□ -0.84
CTSB-216ENST00000530290 ADAMTSL3P82987 1691 aa9.77□□□□□ -0.84
CTSB-216ENST00000530290 ABCA9Q8IUA7 1624 aa9.76□□□□□ -0.85
CTSB-216ENST00000530290 PTPRMP28827 1452 aa9.75□□□□□ -0.85
CTSB-216ENST00000530290 NEO1Q92859 1461 aa9.75□□□□□ -0.85
CTSB-216ENST00000530290 PCF11O94913 1555 aaKnown RBP9.75□□□□□ -0.85
CTSB-216ENST00000530290 CERKQ8TCT0 537 aa9.74□□□□□ -0.85
CTSB-216ENST00000530290 BCORL1Q5H9F3 1711 aa9.73□□□□□ -0.85
CTSB-216ENST00000530290 ARHGEF40Q8TER5 1519 aa9.72□□□□□ -0.85
CTSB-216ENST00000530290 SPATA31D1Q6ZQQ2 1576 aa9.71□□□□□ -0.86
CTSB-216ENST00000530290 CFAP74Q9C0B2 1584 aa9.71□□□□□ -0.86
CTSB-216ENST00000530290 PRXQ9BXM0 1461 aa9.7□□□□□ -0.86
CTSB-216ENST00000530290 MADDQ8WXG6 1647 aa9.69□□□□□ -0.86
CTSB-216ENST00000530290 KCNH8Q96L42 1107 aa9.69□□□□□ -0.86
CTSB-216ENST00000530290 FRMPD1Q5SYB0 1578 aa9.68□□□□□ -0.86
CTSB-216ENST00000530290 ATP10BO94823 1461 aa9.67□□□□□ -0.86
CTSB-216ENST00000530290 POGZQ7Z3K3 1410 aa9.67□□□□□ -0.86
CTSB-216ENST00000530290 RAPGEF6Q8TEU7 1601 aa9.67□□□□□ -0.86
CTSB-216ENST00000530290 SAMD9Q5K651 1589 aa9.67□□□□□ -0.86
CTSB-216ENST00000530290 ZMYM4Q5VZL5 1548 aa9.66□□□□□ -0.86
CTSB-216ENST00000530290 FANCAO15360 1455 aa9.66□□□□□ -0.86
CTSB-216ENST00000530290 EFCAB5A4FU69 1503 aa9.66□□□□□ -0.86
CTSB-216ENST00000530290 RICTORQ6R327 1708 aa9.65□□□□□ -0.86
CTSB-216ENST00000530290 RIMS1Q86UR5 1692 aaKnown RBP9.65□□□□□ -0.86
CTSB-216ENST00000530290 MAGI2Q86UL8 1455 aa9.65□□□□□ -0.87
CTSB-216ENST00000530290 FHOD3Q2V2M9 1422 aa9.65□□□□□ -0.87
CTSB-216ENST00000530290 DENND4BO75064 1496 aaPredicted RBP9.64□□□□□ -0.87
CTSB-216ENST00000530290 AKNAQ7Z591 1439 aa9.64□□□□□ -0.87
CTSB-216ENST00000530290 TTC37Q6PGP7 1564 aa9.62□□□□□ -0.87
CTSB-216ENST00000530290 ARID4BQ4LE39 1312 aaPredicted RBP9.61□□□□□ -0.87
CTSB-216ENST00000530290 FER1L4A9Z1Z3 1794 aa9.61□□□□□ -0.87
CTSB-216ENST00000530290 HSPA2P54652 639 aa9.61□□□□□ -0.87
CTSB-216ENST00000530290 ZFYVE16Q7Z3T8 1539 aa9.61□□□□□ -0.87
CTSB-216ENST00000530290 SETD1BQ9UPS6 1966 aaKnown RBP9.61□□□□□ -0.87
CTSB-216ENST00000530290 RAPGEF3O95398 923 aa9.6□□□□□ -0.87
CTSB-216ENST00000530290 NUP153P49790 1475 aaKnown RBP9.59□□□□□ -0.87
CTSB-216ENST00000530290 PREX1Q8TCU6 1659 aa9.59□□□□□ -0.87
CTSB-216ENST00000530290 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.56□□□□□ -0.88
CTSB-216ENST00000530290 EEA1Q15075 1411 aa9.56□□□□□ -0.88
CTSB-216ENST00000530290 PLEKHD1A6NEE1 506 aa9.55□□□□□ -0.88
CTSB-216ENST00000530290 ARHGEF12Q9NZN5 1544 aa9.55□□□□□ -0.88
CTSB-216ENST00000530290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.54□□□□□ -0.88
CTSB-216ENST00000530290 HNRNPUL2Q1KMD3 747 aaKnown RBP9.54□□□□□ -0.88
CTSB-216ENST00000530290 DMRT2Q9Y5R5 561 aa9.54□□□□□ -0.88
CTSB-216ENST00000530290 C9orf84Q5VXU9 1444 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms