RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 ERCC6L2Q5T890 1561 aa15.62■□□□□ 0.09
TGFBR3-208ENST00000529608 ABCA10Q8WWZ4 1543 aa15.62■□□□□ 0.09
TGFBR3-208ENST00000529608 KCNA4P22459 653 aa15.59■□□□□ 0.09
TGFBR3-208ENST00000529608 HOXD11P31277 338 aaPredicted RBP15.56■□□□□ 0.08
TGFBR3-208ENST00000529608 CEP170Q5SW79 1584 aa15.56■□□□□ 0.08
TGFBR3-208ENST00000529608 GRIN2AQ12879 1464 aa15.55■□□□□ 0.08
TGFBR3-208ENST00000529608 ADAMTS12P58397 1594 aa15.54■□□□□ 0.08
TGFBR3-208ENST00000529608 RNF216Q9NWF9 866 aaPredicted RBP15.54■□□□□ 0.08
TGFBR3-208ENST00000529608 BIVM-ERCC5R4GMW8 1640 aa15.53■□□□□ 0.08
TGFBR3-208ENST00000529608 NUP160Q12769 1436 aa15.51■□□□□ 0.07
TGFBR3-208ENST00000529608 NPM3O75607 178 aaKnown RBP15.5■□□□□ 0.07
TGFBR3-208ENST00000529608 TOP2BQ02880 1626 aa15.5■□□□□ 0.07
TGFBR3-208ENST00000529608 SHROOM2Q13796 1616 aa15.5■□□□□ 0.07
TGFBR3-208ENST00000529608 SUPT5HO00267 1087 aaKnown RBP15.49■□□□□ 0.07
TGFBR3-208ENST00000529608 WRNQ14191 1432 aaPredicted RBP eCLIP15.47■□□□□ 0.07
TGFBR3-208ENST00000529608 KIF13AQ9H1H9 1805 aa15.43■□□□□ 0.06
TGFBR3-208ENST00000529608 FHAD1B1AJZ9 1412 aa15.43■□□□□ 0.06
TGFBR3-208ENST00000529608 ERICH3Q5RHP9 1530 aa15.41■□□□□ 0.06
TGFBR3-208ENST00000529608 PRG4Q92954 1404 aaPredicted RBP15.35■□□□□ 0.05
TGFBR3-208ENST00000529608 RUSC2Q8N2Y8 1516 aa15.35■□□□□ 0.05
TGFBR3-208ENST00000529608 JPH4Q96JJ6 628 aa15.3■□□□□ 0.04
TGFBR3-208ENST00000529608 ADCY10Q96PN6 1610 aa15.27■□□□□ 0.03
TGFBR3-208ENST00000529608 DIP2BQ9P265 1576 aa15.24■□□□□ 0.03
TGFBR3-208ENST00000529608 DCAF8L1A6NGE4 600 aa15.24■□□□□ 0.03
TGFBR3-208ENST00000529608 ABCC10Q5T3U5 1492 aa15.23■□□□□ 0.03
TGFBR3-208ENST00000529608 MAPKBP1O60336 1514 aa15.22■□□□□ 0.03
TGFBR3-208ENST00000529608 FAM69CQ0P6D2 419 aa15.2■□□□□ 0.02
TGFBR3-208ENST00000529608 IGF1RP08069 1367 aa15.18■□□□□ 0.02
TGFBR3-208ENST00000529608 KIAA0586Q9BVV6 1533 aa15.17■□□□□ 0.02
TGFBR3-208ENST00000529608 TSPOAP1O95153 1857 aa15.17■□□□□ 0.02
TGFBR3-208ENST00000529608 CUL7Q14999 1698 aa15.16■□□□□ 0.02
TGFBR3-208ENST00000529608 KDM6BO15054 1643 aa15.13■□□□□ 0.01
TGFBR3-208ENST00000529608 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
TGFBR3-208ENST00000529608 KIF27Q86VH2 1401 aa15.11■□□□□ 0.01
TGFBR3-208ENST00000529608 KDM4FA0A1W2PPD8 638 aa15.08■□□□□ 0
TGFBR3-208ENST00000529608 PPRC1Q5VV67 1664 aaKnown RBP15.08■□□□□ 0
TGFBR3-208ENST00000529608 TTBK1Q5TCY1 1321 aaPredicted RBP15.06■□□□□ 0
TGFBR3-208ENST00000529608 CARMIL1Q5VZK9 1371 aa15.05■□□□□ -0
TGFBR3-208ENST00000529608 PTPRGP23470 1445 aa15.05■□□□□ -0
TGFBR3-208ENST00000529608 ABCC2Q92887 1545 aa15.03■□□□□ -0
TGFBR3-208ENST00000529608 IQGAP2Q13576 1575 aa15.02■□□□□ -0
TGFBR3-208ENST00000529608 TNIKQ9UKE5 1360 aa15.01□□□□□ -0.01
TGFBR3-208ENST00000529608 DISP1Q96F81 1524 aa15.01□□□□□ -0.01
TGFBR3-208ENST00000529608 ASXL2Q76L83 1435 aa15□□□□□ -0.01
TGFBR3-208ENST00000529608 GLI2P10070 1586 aa15□□□□□ -0.01
TGFBR3-208ENST00000529608 CARMIL2Q6F5E8 1435 aa14.98□□□□□ -0.01
TGFBR3-208ENST00000529608 UHRF1BP1LA0JNW5 1464 aa14.97□□□□□ -0.01
TGFBR3-208ENST00000529608 COL17A1Q9UMD9 1497 aaPredicted RBP14.96□□□□□ -0.01
TGFBR3-208ENST00000529608 PLB1Q6P1J6 1458 aa14.95□□□□□ -0.02
TGFBR3-208ENST00000529608 ZCCHC11Q5TAX3 1644 aaKnown RBP14.95□□□□□ -0.02
TGFBR3-208ENST00000529608 MAP3K4Q9Y6R4 1608 aa14.95□□□□□ -0.02
TGFBR3-208ENST00000529608 UACAQ9BZF9 1416 aa14.94□□□□□ -0.02
TGFBR3-208ENST00000529608 UGGT2Q9NYU1 1516 aa14.93□□□□□ -0.02
TGFBR3-208ENST00000529608 KDM5BQ9UGL1 1544 aa14.93□□□□□ -0.02
TGFBR3-208ENST00000529608 EPRSP07814 1512 aaKnown RBP14.92□□□□□ -0.02
TGFBR3-208ENST00000529608 KIAA0556O60303 1618 aa14.92□□□□□ -0.02
TGFBR3-208ENST00000529608 ADGRL1O94910 1474 aa14.9□□□□□ -0.02
TGFBR3-208ENST00000529608 RAPGEF2Q9Y4G8 1499 aa14.89□□□□□ -0.03
TGFBR3-208ENST00000529608 CTTNBP2Q8WZ74 1663 aa14.87□□□□□ -0.03
TGFBR3-208ENST00000529608 WDR7Q9Y4E6 1490 aa14.82□□□□□ -0.04
TGFBR3-208ENST00000529608 TEX14Q8IWB6 1497 aa14.81□□□□□ -0.04
TGFBR3-208ENST00000529608 ILDR1Q86SU0 546 aaPredicted RBP14.8□□□□□ -0.04
TGFBR3-208ENST00000529608 ABCA8O94911 1581 aa14.8□□□□□ -0.04
TGFBR3-208ENST00000529608 RNF39Q9H2S5 420 aa14.79□□□□□ -0.04
TGFBR3-208ENST00000529608 CFAP43Q8NDM7 1665 aa14.78□□□□□ -0.04
TGFBR3-208ENST00000529608 HECW2Q9P2P5 1572 aa14.78□□□□□ -0.04
TGFBR3-208ENST00000529608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.77□□□□□ -0.055e-10■□□□□ 8
TGFBR3-208ENST00000529608 SLC4A1APQ9BWU0 796 aaKnown RBP14.76□□□□□ -0.05
TGFBR3-208ENST00000529608 MAGI3Q5TCQ9 1506 aa14.74□□□□□ -0.05
TGFBR3-208ENST00000529608 CD109Q6YHK3 1445 aa14.73□□□□□ -0.05
TGFBR3-208ENST00000529608 KIF21BO75037 1637 aa14.73□□□□□ -0.05
TGFBR3-208ENST00000529608 PRXQ9BXM0 1461 aa14.72□□□□□ -0.05
TGFBR3-208ENST00000529608 KCNH8Q96L42 1107 aa14.72□□□□□ -0.05
TGFBR3-208ENST00000529608 GOLGA3Q08378 1498 aa14.71□□□□□ -0.05
TGFBR3-208ENST00000529608 SLC4A2P04920 1241 aa14.71□□□□□ -0.05
TGFBR3-208ENST00000529608 ARID3CA6NKF2 412 aa14.67□□□□□ -0.06
TGFBR3-208ENST00000529608 ATP10BO94823 1461 aa14.66□□□□□ -0.06
TGFBR3-208ENST00000529608 P3H3Q8IVL6 736 aa14.65□□□□□ -0.06
TGFBR3-208ENST00000529608 ABCA9Q8IUA7 1624 aa14.64□□□□□ -0.07
TGFBR3-208ENST00000529608 ARAP3Q8WWN8 1544 aa14.64□□□□□ -0.07
TGFBR3-208ENST00000529608 SAMD9Q5K651 1589 aa14.63□□□□□ -0.07
TGFBR3-208ENST00000529608 ADAMTSL3P82987 1691 aa14.6□□□□□ -0.07
TGFBR3-208ENST00000529608 FRMPD1Q5SYB0 1578 aa14.6□□□□□ -0.07
TGFBR3-208ENST00000529608 RAPGEF6Q8TEU7 1601 aa14.59□□□□□ -0.07
TGFBR3-208ENST00000529608 C1QBPQ07021 282 aaKnown RBP14.57□□□□□ -0.08
TGFBR3-208ENST00000529608 U3KPZ7 1027 aaPredicted RBP14.57□□□□□ -0.08
TGFBR3-208ENST00000529608 RAPGEF3O95398 923 aa14.55□□□□□ -0.08
TGFBR3-208ENST00000529608 NUP153P49790 1475 aaKnown RBP14.55□□□□□ -0.08
TGFBR3-208ENST00000529608 BCORL1Q5H9F3 1711 aa14.55□□□□□ -0.08
TGFBR3-208ENST00000529608 PTPRMP28827 1452 aa14.54□□□□□ -0.08
TGFBR3-208ENST00000529608 MADDQ8WXG6 1647 aa14.53□□□□□ -0.08
TGFBR3-208ENST00000529608 CACNB1Q02641 598 aaPredicted RBP14.53□□□□□ -0.08
TGFBR3-208ENST00000529608 NEO1Q92859 1461 aa14.52□□□□□ -0.08
TGFBR3-208ENST00000529608 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
TGFBR3-208ENST00000529608 RICTORQ6R327 1708 aa14.51□□□□□ -0.09
TGFBR3-208ENST00000529608 SIGLEC1Q9BZZ2 1709 aa14.51□□□□□ -0.09
TGFBR3-208ENST00000529608 FHOD3Q2V2M9 1422 aa14.49□□□□□ -0.09
TGFBR3-208ENST00000529608 PHLDB1Q86UU1 1377 aa14.49□□□□□ -0.09
TGFBR3-208ENST00000529608 RANGAP1P46060 587 aaPredicted RBP14.48□□□□□ -0.09
TGFBR3-208ENST00000529608 RIMS1Q86UR5 1692 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms