RNA–Protein interactions for RNA: ENST00000529462.5

SLC39A4-205, Transcript of solute carrier family 39 member 4, humanhuman

TSL 2

Gene SLC39A4, Length 2,778 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-205ENST00000529462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.28■■□□□ 1.32
SLC39A4-205ENST00000529462 ATP1B4Q9UN42 357 aaPredicted RBP23.21■■□□□ 1.31
SLC39A4-205ENST00000529462 WDR62O43379 1518 aa23.2■■□□□ 1.3
SLC39A4-205ENST00000529462 ZNF608Q9ULD9 1512 aaPredicted RBP23.2■■□□□ 1.3
SLC39A4-205ENST00000529462 HNRNPUL2Q1KMD3 747 aaKnown RBP23.2■■□□□ 1.3
SLC39A4-205ENST00000529462 CCER1Q8TC90 406 aaPredicted RBP23.17■■□□□ 1.3
SLC39A4-205ENST00000529462 IFT140Q96RY7 1462 aa23.16■■□□□ 1.3
SLC39A4-205ENST00000529462 ZEB1P37275 1124 aaPredicted RBP23.16■■□□□ 1.3
SLC39A4-205ENST00000529462 FHOD3Q2V2M9 1422 aa23.14■■□□□ 1.3
SLC39A4-205ENST00000529462 CTTNBP2Q8WZ74 1663 aa23.12■■□□□ 1.29
SLC39A4-205ENST00000529462 PBRM1Q86U86 1689 aa23.12■■□□□ 1.29
SLC39A4-205ENST00000529462 GRIN2BQ13224 1484 aa23.1■■□□□ 1.29
SLC39A4-205ENST00000529462 FHAD1B1AJZ9 1412 aa23.09■■□□□ 1.29
SLC39A4-205ENST00000529462 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
SLC39A4-205ENST00000529462 EFCAB5A4FU69 1503 aa23.01■■□□□ 1.27
SLC39A4-205ENST00000529462 ADAMTS12P58397 1594 aa23■■□□□ 1.27
SLC39A4-205ENST00000529462 FBLN2P98095 1184 aa22.98■■□□□ 1.27
SLC39A4-205ENST00000529462 SNAPC4Q5SXM2 1469 aa22.97■■□□□ 1.27
SLC39A4-205ENST00000529462 PCF11O94913 1555 aaKnown RBP22.97■■□□□ 1.27
SLC39A4-205ENST00000529462 EIF4G3O43432 1585 aaKnown RBP22.97■■□□□ 1.27
SLC39A4-205ENST00000529462 TIAM1Q13009 1591 aa22.96■■□□□ 1.27
SLC39A4-205ENST00000529462 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
SLC39A4-205ENST00000529462 FMN1Q68DA7 1419 aa22.92■■□□□ 1.26
SLC39A4-205ENST00000529462 CASKIN1Q8WXD9 1431 aa22.92■■□□□ 1.26
SLC39A4-205ENST00000529462 ITGAEP38570 1179 aa22.91■■□□□ 1.26
SLC39A4-205ENST00000529462 LRRC9Q6ZRR7 1453 aa22.91■■□□□ 1.26
SLC39A4-205ENST00000529462 SAMD9Q5K651 1589 aa22.9■■□□□ 1.26
SLC39A4-205ENST00000529462 MAP3K1Q13233 1512 aa22.9■■□□□ 1.26
SLC39A4-205ENST00000529462 FYCO1Q9BQS8 1478 aa22.88■■□□□ 1.25
SLC39A4-205ENST00000529462 IQGAP2Q13576 1575 aa22.87■■□□□ 1.25
SLC39A4-205ENST00000529462 RRBP1Q9P2E9 1410 aaKnown RBP22.86■■□□□ 1.25
SLC39A4-205ENST00000529462 CCNB3Q8WWL7 1395 aa22.85■■□□□ 1.25
SLC39A4-205ENST00000529462 GRIN2AQ12879 1464 aa22.84■■□□□ 1.25
SLC39A4-205ENST00000529462 PHLDB1Q86UU1 1377 aa22.82■■□□□ 1.24
SLC39A4-205ENST00000529462 ACIN1Q9UKV3 1341 aaKnown RBP22.82■■□□□ 1.24
SLC39A4-205ENST00000529462 ARID3CA6NKF2 412 aa22.8■■□□□ 1.24
SLC39A4-205ENST00000529462 MAGI1Q96QZ7 1491 aaPredicted RBP22.8■■□□□ 1.24
SLC39A4-205ENST00000529462 CFAP43Q8NDM7 1665 aa22.79■■□□□ 1.24
SLC39A4-205ENST00000529462 KIAA0586Q9BVV6 1533 aa22.79■■□□□ 1.24
SLC39A4-205ENST00000529462 FAM50AQ14320 339 aaKnown RBP22.78■■□□□ 1.24
SLC39A4-205ENST00000529462 SYNJ2O15056 1496 aa22.77■■□□□ 1.24
SLC39A4-205ENST00000529462 MTUS2Q5JR59 1369 aa22.75■■□□□ 1.23
SLC39A4-205ENST00000529462 LRRIQ1Q96JM4 1722 aa22.72■■□□□ 1.23
SLC39A4-205ENST00000529462 UGGT2Q9NYU1 1516 aa22.72■■□□□ 1.23
SLC39A4-205ENST00000529462 CEP170Q5SW79 1584 aa22.69■■□□□ 1.22
SLC39A4-205ENST00000529462 NEUROD1Q13562 356 aa22.69■■□□□ 1.22
SLC39A4-205ENST00000529462 JPH4Q96JJ6 628 aa22.69■■□□□ 1.22
SLC39A4-205ENST00000529462 DISP1Q96F81 1524 aa22.68■■□□□ 1.22
SLC39A4-205ENST00000529462 GTF3C3Q9Y5Q9 886 aa22.62■■□□□ 1.21
SLC39A4-205ENST00000529462 KIAA0556O60303 1618 aa22.62■■□□□ 1.21
SLC39A4-205ENST00000529462 NUP160Q12769 1436 aa22.6■■□□□ 1.21
SLC39A4-205ENST00000529462 EPRSP07814 1512 aaKnown RBP22.6■■□□□ 1.21
SLC39A4-205ENST00000529462 CDK13Q14004 1512 aaKnown RBP22.59■■□□□ 1.21
SLC39A4-205ENST00000529462 MAGI3Q5TCQ9 1506 aa22.58■■□□□ 1.21
SLC39A4-205ENST00000529462 NCOA2Q15596 1464 aa22.57■■□□□ 1.2
SLC39A4-205ENST00000529462 HECW1Q76N89 1606 aa22.57■■□□□ 1.2
SLC39A4-205ENST00000529462 CCDC18Q5T9S5 1454 aa22.57■■□□□ 1.2
SLC39A4-205ENST00000529462 DHX57Q6P158 1386 aaKnown RBP22.56■■□□□ 1.2
SLC39A4-205ENST00000529462 FGD6Q6ZV73 1430 aa22.55■■□□□ 1.2
SLC39A4-205ENST00000529462 RAB3GAP2Q9H2M9 1393 aa22.53■■□□□ 1.2
SLC39A4-205ENST00000529462 CARMIL2Q6F5E8 1435 aa22.52■■□□□ 1.2
SLC39A4-205ENST00000529462 EHBP1L1Q8N3D4 1523 aa22.51■■□□□ 1.19
SLC39A4-205ENST00000529462 SUPT6HQ7KZ85 1726 aaKnown RBP22.51■■□□□ 1.19
SLC39A4-205ENST00000529462 PLB1Q6P1J6 1458 aa22.49■■□□□ 1.19
SLC39A4-205ENST00000529462 MYOM3Q5VTT5 1437 aa22.49■■□□□ 1.19
SLC39A4-205ENST00000529462 SETD5Q9C0A6 1442 aa22.49■■□□□ 1.19
SLC39A4-205ENST00000529462 NUP153P49790 1475 aaKnown RBP22.48■■□□□ 1.19
SLC39A4-205ENST00000529462 RAPGEF6Q8TEU7 1601 aa22.46■■□□□ 1.19
SLC39A4-205ENST00000529462 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.46■■□□□ 1.19
SLC39A4-205ENST00000529462 CENPBP07199 599 aaPredicted RBP22.44■■□□□ 1.18
SLC39A4-205ENST00000529462 CDK11AQ9UQ88 783 aaPredicted RBP22.44■■□□□ 1.18
SLC39A4-205ENST00000529462 CHD1O14646 1710 aa22.43■■□□□ 1.18
SLC39A4-205ENST00000529462 PRG4Q92954 1404 aaPredicted RBP22.43■■□□□ 1.18
SLC39A4-205ENST00000529462 PTPRKQ15262 1439 aa22.41■■□□□ 1.18
SLC39A4-205ENST00000529462 ARHGEF11O15085 1522 aa22.4■■□□□ 1.18
SLC39A4-205ENST00000529462 CLSPNQ9HAW4 1339 aa22.4■■□□□ 1.18
SLC39A4-205ENST00000529462 CHIC2Q9UKJ5 165 aa22.39■■□□□ 1.17
SLC39A4-205ENST00000529462 PTPN23Q9H3S7 1636 aa22.36■■□□□ 1.17
SLC39A4-205ENST00000529462 PTPRGP23470 1445 aa22.34■■□□□ 1.17
SLC39A4-205ENST00000529462 RRP7BPQ9NSQ0 103 aa22.32■■□□□ 1.16
SLC39A4-205ENST00000529462 ZNF644Q9H582 1327 aaPredicted RBP22.32■■□□□ 1.16
SLC39A4-205ENST00000529462 PLEKHD1A6NEE1 506 aa22.3■■□□□ 1.16
SLC39A4-205ENST00000529462 ZNF316A6NFI3 1004 aaPredicted RBP22.3■■□□□ 1.16
SLC39A4-205ENST00000529462 TROQ12816 1431 aaPredicted RBP22.28■■□□□ 1.16
SLC39A4-205ENST00000529462 MIA2Q96PC5 1412 aa22.27■■□□□ 1.16
SLC39A4-205ENST00000529462 SIN3AQ96ST3 1273 aa22.27■■□□□ 1.15
SLC39A4-205ENST00000529462 ATP10BO94823 1461 aa22.26■■□□□ 1.15
SLC39A4-205ENST00000529462 ABCA8O94911 1581 aa22.26■■□□□ 1.15
SLC39A4-205ENST00000529462 ZNF777Q9ULD5 760 aaPredicted RBP22.26■■□□□ 1.15
SLC39A4-205ENST00000529462 TCOF1Q13428 1488 aaKnown RBP22.25■■□□□ 1.15
SLC39A4-205ENST00000529462 DIEXFQ68CQ4 756 aaKnown RBP22.24■■□□□ 1.15
SLC39A4-205ENST00000529462 CFDP1Q9UEE9 299 aaPredicted RBP22.24■■□□□ 1.15
SLC39A4-205ENST00000529462 MAPKBP1O60336 1514 aa22.24■■□□□ 1.15
SLC39A4-205ENST00000529462 HFM1A2PYH4 1435 aa22.24■■□□□ 1.15
SLC39A4-205ENST00000529462 NAIPQ13075 1403 aa22.23■■□□□ 1.15
SLC39A4-205ENST00000529462 ERCC6L2Q5T890 1561 aa22.23■■□□□ 1.15
SLC39A4-205ENST00000529462 KIF14Q15058 1648 aa22.19■■□□□ 1.14
SLC39A4-205ENST00000529462 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
SLC39A4-205ENST00000529462 GPATCH8Q9UKJ3 1502 aaKnown RBP22.16■■□□□ 1.14
SLC39A4-205ENST00000529462 BCL11AQ9H165 835 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms