RNA–Protein interactions for RNA: ENST00000529201.1

SNRNP35-205, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-205ENST00000529201 IGF1RP08069 1367 aa23.27■■□□□ 1.31
SNRNP35-205ENST00000529201 CUL7Q14999 1698 aa23.26■■□□□ 1.31
SNRNP35-205ENST00000529201 ERCC6L2Q5T890 1561 aa23.19■■□□□ 1.3
SNRNP35-205ENST00000529201 RUSC2Q8N2Y8 1516 aa23.18■■□□□ 1.3
SNRNP35-205ENST00000529201 TRHP20396 242 aaPredicted RBP23.18■■□□□ 1.3
SNRNP35-205ENST00000529201 JPH4Q96JJ6 628 aa23.18■■□□□ 1.3
SNRNP35-205ENST00000529201 PRG4Q92954 1404 aaPredicted RBP23.16■■□□□ 1.3
SNRNP35-205ENST00000529201 KIAA0586Q9BVV6 1533 aa23.13■■□□□ 1.29
SNRNP35-205ENST00000529201 CARMIL1Q5VZK9 1371 aa23.13■■□□□ 1.29
SNRNP35-205ENST00000529201 RAPGEF2Q9Y4G8 1499 aa22.97■■□□□ 1.27
SNRNP35-205ENST00000529201 IQGAP2Q13576 1575 aa22.93■■□□□ 1.26
SNRNP35-205ENST00000529201 CARMIL2Q6F5E8 1435 aa22.92■■□□□ 1.26
SNRNP35-205ENST00000529201 NPM1P06748 294 aaKnown RBP eCLIP22.9■■□□□ 1.26
SNRNP35-205ENST00000529201 PTPRGP23470 1445 aa22.85■■□□□ 1.25
SNRNP35-205ENST00000529201 TNIKQ9UKE5 1360 aa22.85■■□□□ 1.25
SNRNP35-205ENST00000529201 ADCY10Q96PN6 1610 aa22.84■■□□□ 1.25
SNRNP35-205ENST00000529201 MAPKBP1O60336 1514 aa22.82■■□□□ 1.24
SNRNP35-205ENST00000529201 UGGT2Q9NYU1 1516 aa22.81■■□□□ 1.24
SNRNP35-205ENST00000529201 KIF13AQ9H1H9 1805 aa22.78■■□□□ 1.24
SNRNP35-205ENST00000529201 PRXQ9BXM0 1461 aa22.78■■□□□ 1.24
SNRNP35-205ENST00000529201 DISP1Q96F81 1524 aa22.77■■□□□ 1.24
SNRNP35-205ENST00000529201 CTTNBP2Q8WZ74 1663 aa22.77■■□□□ 1.24
SNRNP35-205ENST00000529201 ABCC10Q5T3U5 1492 aa22.75■■□□□ 1.23
SNRNP35-205ENST00000529201 UHRF1BP1LA0JNW5 1464 aa22.72■■□□□ 1.23
SNRNP35-205ENST00000529201 ABCC2Q92887 1545 aa22.71■■□□□ 1.23
SNRNP35-205ENST00000529201 KIAA0556O60303 1618 aa22.71■■□□□ 1.23
SNRNP35-205ENST00000529201 EEA1Q15075 1411 aa22.7■■□□□ 1.22
SNRNP35-205ENST00000529201 GOLGA3Q08378 1498 aa22.69■■□□□ 1.22
SNRNP35-205ENST00000529201 UACAQ9BZF9 1416 aa22.69■■□□□ 1.22
SNRNP35-205ENST00000529201 FAM69CQ0P6D2 419 aa22.69■■□□□ 1.22
SNRNP35-205ENST00000529201 TTBK1Q5TCY1 1321 aaPredicted RBP22.68■■□□□ 1.22
SNRNP35-205ENST00000529201 CSRNP3Q8WYN3 585 aa22.68■■□□□ 1.22
SNRNP35-205ENST00000529201 DIP2BQ9P265 1576 aa22.67■■□□□ 1.22
SNRNP35-205ENST00000529201 PLPPR3Q6T4P5 718 aa22.64■■□□□ 1.21
SNRNP35-205ENST00000529201 PLB1Q6P1J6 1458 aa22.61■■□□□ 1.21
SNRNP35-205ENST00000529201 KDM5BQ9UGL1 1544 aa22.6■■□□□ 1.21
SNRNP35-205ENST00000529201 ASXL2Q76L83 1435 aa22.57■■□□□ 1.2
SNRNP35-205ENST00000529201 FAM9AQ8IZU1 332 aaPredicted RBP22.56■■□□□ 1.2
SNRNP35-205ENST00000529201 GLI2P10070 1586 aa22.54■■□□□ 1.2
SNRNP35-205ENST00000529201 ZCCHC11Q5TAX3 1644 aaKnown RBP22.51■■□□□ 1.19
SNRNP35-205ENST00000529201 ABCA8O94911 1581 aa22.49■■□□□ 1.19
SNRNP35-205ENST00000529201 MSH5O43196 834 aa22.48■■□□□ 1.19
SNRNP35-205ENST00000529201 TSPOAP1O95153 1857 aa22.47■■□□□ 1.19
SNRNP35-205ENST00000529201 SAMD9Q5K651 1589 aa22.45■■□□□ 1.18
SNRNP35-205ENST00000529201 KIF21BO75037 1637 aa22.45■■□□□ 1.18
SNRNP35-205ENST00000529201 EPRSP07814 1512 aaKnown RBP22.44■■□□□ 1.18
SNRNP35-205ENST00000529201 KDM6BO15054 1643 aa22.42■■□□□ 1.18
SNRNP35-205ENST00000529201 WDR7Q9Y4E6 1490 aa22.41■■□□□ 1.18
SNRNP35-205ENST00000529201 MAP3K4Q9Y6R4 1608 aa22.39■■□□□ 1.17
SNRNP35-205ENST00000529201 PIAS4Q8N2W9 510 aaPredicted RBP22.38■■□□□ 1.17
SNRNP35-205ENST00000529201 PPRC1Q5VV67 1664 aaKnown RBP22.37■■□□□ 1.17
SNRNP35-205ENST00000529201 P3H3Q8IVL6 736 aa22.37■■□□□ 1.17
SNRNP35-205ENST00000529201 TEX14Q8IWB6 1497 aa22.35■■□□□ 1.17
SNRNP35-205ENST00000529201 PPP6R1Q9UPN7 881 aa22.33■■□□□ 1.17
SNRNP35-205ENST00000529201 EFCAB5A4FU69 1503 aa22.31■■□□□ 1.16
SNRNP35-205ENST00000529201 RAPGEF6Q8TEU7 1601 aa22.31■■□□□ 1.16
SNRNP35-205ENST00000529201 CFAP43Q8NDM7 1665 aa22.3■■□□□ 1.16
SNRNP35-205ENST00000529201 ATP10BO94823 1461 aa22.28■■□□□ 1.16
SNRNP35-205ENST00000529201 ADRA2BP18089 450 aa22.26■■□□□ 1.15
SNRNP35-205ENST00000529201 KCNH8Q96L42 1107 aa22.26■■□□□ 1.15
SNRNP35-205ENST00000529201 CD109Q6YHK3 1445 aa22.25■■□□□ 1.15
SNRNP35-205ENST00000529201 MAGI3Q5TCQ9 1506 aa22.25■■□□□ 1.15
SNRNP35-205ENST00000529201 FHOD3Q2V2M9 1422 aa22.24■■□□□ 1.15
SNRNP35-205ENST00000529201 RANGAP1P46060 587 aaPredicted RBP22.24■■□□□ 1.15
SNRNP35-205ENST00000529201 POTEDQ86YR6 584 aa22.24■■□□□ 1.15
SNRNP35-205ENST00000529201 UBTFP17480 764 aaKnown RBP22.23■■□□□ 1.15
SNRNP35-205ENST00000529201 NUP153P49790 1475 aaKnown RBP22.2■■□□□ 1.14
SNRNP35-205ENST00000529201 ARID3CA6NKF2 412 aa22.18■■□□□ 1.14
SNRNP35-205ENST00000529201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.17■■□□□ 1.14
SNRNP35-205ENST00000529201 HNRNPUL2Q1KMD3 747 aaKnown RBP22.17■■□□□ 1.14
SNRNP35-205ENST00000529201 COL17A1Q9UMD9 1497 aaPredicted RBP22.16■■□□□ 1.14
SNRNP35-205ENST00000529201 ABCA9Q8IUA7 1624 aa22.16■■□□□ 1.14
SNRNP35-205ENST00000529201 PHLDB1Q86UU1 1377 aa22.12■■□□□ 1.13
SNRNP35-205ENST00000529201 FMN1Q68DA7 1419 aa22.12■■□□□ 1.13
SNRNP35-205ENST00000529201 PLEKHD1A6NEE1 506 aa22.11■■□□□ 1.13
SNRNP35-205ENST00000529201 EHMT2Q96KQ7 1210 aa22.09■■□□□ 1.13
SNRNP35-205ENST00000529201 ARHGAP35Q9NRY4 1499 aa22.08■■□□□ 1.12
SNRNP35-205ENST00000529201 ARAP3Q8WWN8 1544 aa22.07■■□□□ 1.12
SNRNP35-205ENST00000529201 NEO1Q92859 1461 aa22.04■■□□□ 1.12
SNRNP35-205ENST00000529201 HECW1Q76N89 1606 aa22.03■■□□□ 1.12
SNRNP35-205ENST00000529201 KDM4FA0A1W2PPD8 638 aa22.03■■□□□ 1.12
SNRNP35-205ENST00000529201 CDK11AQ9UQ88 783 aaPredicted RBP21.98■■□□□ 1.11
SNRNP35-205ENST00000529201 CDK13Q14004 1512 aaKnown RBP21.96■■□□□ 1.11
SNRNP35-205ENST00000529201 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.96■■□□□ 1.11
SNRNP35-205ENST00000529201 ATP1B4Q9UN42 357 aaPredicted RBP21.95■■□□□ 1.1
SNRNP35-205ENST00000529201 CFAP74Q9C0B2 1584 aa21.95■■□□□ 1.1
SNRNP35-205ENST00000529201 ADGRL1O94910 1474 aa21.94■■□□□ 1.1
SNRNP35-205ENST00000529201 TTC37Q6PGP7 1564 aa21.9■■□□□ 1.1
SNRNP35-205ENST00000529201 FANCAO15360 1455 aa21.9■■□□□ 1.1
SNRNP35-205ENST00000529201 AKNAQ7Z591 1439 aa21.88■■□□□ 1.09
SNRNP35-205ENST00000529201 CASKIN1Q8WXD9 1431 aa21.88■■□□□ 1.09
SNRNP35-205ENST00000529201 CCDC18Q5T9S5 1454 aa21.86■■□□□ 1.09
SNRNP35-205ENST00000529201 RAPGEF3O95398 923 aa21.86■■□□□ 1.09
SNRNP35-205ENST00000529201 PLCH2O75038 1416 aa21.86■■□□□ 1.09
SNRNP35-205ENST00000529201 DENND4BO75064 1496 aaPredicted RBP21.85■■□□□ 1.09
SNRNP35-205ENST00000529201 CLIP1P30622 1438 aa21.85■■□□□ 1.09
SNRNP35-205ENST00000529201 TROQ12816 1431 aaPredicted RBP21.85■■□□□ 1.09
SNRNP35-205ENST00000529201 KIF14Q15058 1648 aa21.84■■□□□ 1.09
SNRNP35-205ENST00000529201 LRRIQ1Q96JM4 1722 aa21.83■■□□□ 1.09
SNRNP35-205ENST00000529201 FRMPD1Q5SYB0 1578 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms