RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 FAM69CQ0P6D2 419 aa34.32■■■■□ 3.08
SSRP1-204ENST00000529002 ABCC10Q5T3U5 1492 aa34.27■■■■□ 3.08
SSRP1-204ENST00000529002 RUSC2Q8N2Y8 1516 aa34.26■■■■□ 3.08
SSRP1-204ENST00000529002 DIP2BQ9P265 1576 aa34.21■■■■□ 3.07
SSRP1-204ENST00000529002 ADCY10Q96PN6 1610 aa34.2■■■■□ 3.07
SSRP1-204ENST00000529002 MAPKBP1O60336 1514 aa34.17■■■■□ 3.06
SSRP1-204ENST00000529002 TSPOAP1O95153 1857 aa34.17■■■■□ 3.06
SSRP1-204ENST00000529002 NPM1P06748 294 aaKnown RBP eCLIP34.17■■■■□ 3.06
SSRP1-204ENST00000529002 KDM4FA0A1W2PPD8 638 aa34.1■■■■□ 3.05
SSRP1-204ENST00000529002 KDM6BO15054 1643 aa34.09■■■■□ 3.05
SSRP1-204ENST00000529002 KIAA0586Q9BVV6 1533 aa33.95■■■■□ 3.03
SSRP1-204ENST00000529002 TTBK1Q5TCY1 1321 aaPredicted RBP33.91■■■■□ 3.02
SSRP1-204ENST00000529002 IGF1RP08069 1367 aa33.88■■■■□ 3.01
SSRP1-204ENST00000529002 CUL7Q14999 1698 aa33.81■■■■□ 3
SSRP1-204ENST00000529002 PTPRGP23470 1445 aa33.79■■■■□ 3
SSRP1-204ENST00000529002 PPRC1Q5VV67 1664 aaKnown RBP33.77■■■■□ 3
SSRP1-204ENST00000529002 ILDR1Q86SU0 546 aaPredicted RBP33.77■■■■□ 3
SSRP1-204ENST00000529002 KIF27Q86VH2 1401 aa33.74■■■□□ 2.99
SSRP1-204ENST00000529002 ABCC2Q92887 1545 aa33.7■■■□□ 2.99
SSRP1-204ENST00000529002 ASXL2Q76L83 1435 aa33.69■■■□□ 2.98
SSRP1-204ENST00000529002 TNIKQ9UKE5 1360 aa33.66■■■□□ 2.98
SSRP1-204ENST00000529002 ADGRL1O94910 1474 aa33.63■■■□□ 2.97
SSRP1-204ENST00000529002 CARMIL1Q5VZK9 1371 aa33.63■■■□□ 2.97
SSRP1-204ENST00000529002 GLI2P10070 1586 aa33.62■■■□□ 2.97
SSRP1-204ENST00000529002 CARMIL2Q6F5E8 1435 aa33.61■■■□□ 2.97
SSRP1-204ENST00000529002 PLB1Q6P1J6 1458 aa33.6■■■□□ 2.97
SSRP1-204ENST00000529002 COL17A1Q9UMD9 1497 aaPredicted RBP33.59■■■□□ 2.97
SSRP1-204ENST00000529002 IQGAP2Q13576 1575 aa33.56■■■□□ 2.96
SSRP1-204ENST00000529002 UHRF1BP1LA0JNW5 1464 aa33.52■■■□□ 2.96
SSRP1-204ENST00000529002 UACAQ9BZF9 1416 aa33.51■■■□□ 2.95
SSRP1-204ENST00000529002 DISP1Q96F81 1524 aa33.49■■■□□ 2.95
SSRP1-204ENST00000529002 MAP3K4Q9Y6R4 1608 aa33.48■■■□□ 2.95
SSRP1-204ENST00000529002 EPRSP07814 1512 aaKnown RBP33.48■■■□□ 2.95
SSRP1-204ENST00000529002 ZCCHC11Q5TAX3 1644 aaKnown RBP33.42■■■□□ 2.94
SSRP1-204ENST00000529002 KDM5BQ9UGL1 1544 aa33.42■■■□□ 2.94
SSRP1-204ENST00000529002 HECW2Q9P2P5 1572 aa33.41■■■□□ 2.94
SSRP1-204ENST00000529002 TEX14Q8IWB6 1497 aa33.32■■■□□ 2.92
SSRP1-204ENST00000529002 UGGT2Q9NYU1 1516 aa33.31■■■□□ 2.92
SSRP1-204ENST00000529002 KIAA0556O60303 1618 aa33.3■■■□□ 2.92
SSRP1-204ENST00000529002 RAPGEF2Q9Y4G8 1499 aa33.23■■■□□ 2.91
SSRP1-204ENST00000529002 WDR7Q9Y4E6 1490 aa33.21■■■□□ 2.91
SSRP1-204ENST00000529002 KCNH8Q96L42 1107 aa33.13■■■□□ 2.89
SSRP1-204ENST00000529002 CD109Q6YHK3 1445 aa33.11■■■□□ 2.89
SSRP1-204ENST00000529002 CFAP43Q8NDM7 1665 aa33.1■■■□□ 2.89
SSRP1-204ENST00000529002 KIF21BO75037 1637 aa33.08■■■□□ 2.89
SSRP1-204ENST00000529002 CTTNBP2Q8WZ74 1663 aa33.07■■■□□ 2.89
SSRP1-204ENST00000529002 MAGI3Q5TCQ9 1506 aa33.07■■■□□ 2.88
SSRP1-204ENST00000529002 ABCA8O94911 1581 aa33.04■■■□□ 2.88
SSRP1-204ENST00000529002 ARID3CA6NKF2 412 aa32.93■■■□□ 2.86
SSRP1-204ENST00000529002 GOLGA3Q08378 1498 aa32.91■■■□□ 2.86
SSRP1-204ENST00000529002 ARAP3Q8WWN8 1544 aa32.83■■■□□ 2.85
SSRP1-204ENST00000529002 FBXO41Q8TF61 875 aa32.8■■■□□ 2.84
SSRP1-204ENST00000529002 P3H3Q8IVL6 736 aa32.79■■■□□ 2.84
SSRP1-204ENST00000529002 ADAMTSL3P82987 1691 aa32.78■■■□□ 2.84
SSRP1-204ENST00000529002 ATP10BO94823 1461 aa32.77■■■□□ 2.84
SSRP1-204ENST00000529002 PTPRMP28827 1452 aa32.76■■■□□ 2.84
SSRP1-204ENST00000529002 RAPGEF3O95398 923 aa32.74■■■□□ 2.83
SSRP1-204ENST00000529002 ABCA9Q8IUA7 1624 aa32.72■■■□□ 2.83
SSRP1-204ENST00000529002 PRXQ9BXM0 1461 aa32.72■■■□□ 2.83
SSRP1-204ENST00000529002 BCORL1Q5H9F3 1711 aa32.65■■■□□ 2.82
SSRP1-204ENST00000529002 MADDQ8WXG6 1647 aa32.64■■■□□ 2.82
SSRP1-204ENST00000529002 FRMPD1Q5SYB0 1578 aa32.63■■■□□ 2.81
SSRP1-204ENST00000529002 ARID4BQ4LE39 1312 aaPredicted RBP32.58■■■□□ 2.81
SSRP1-204ENST00000529002 PHLDB1Q86UU1 1377 aa32.58■■■□□ 2.81
SSRP1-204ENST00000529002 RAPGEF6Q8TEU7 1601 aa32.56■■■□□ 2.8
SSRP1-204ENST00000529002 PCF11O94913 1555 aaKnown RBP32.56■■■□□ 2.8
SSRP1-204ENST00000529002 NEO1Q92859 1461 aa32.55■■■□□ 2.8
SSRP1-204ENST00000529002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.54■■■□□ 2.8
SSRP1-204ENST00000529002 HNRNPUL2Q1KMD3 747 aaKnown RBP32.54■■■□□ 2.8
SSRP1-204ENST00000529002 LMTK3Q96Q04 1460 aa32.54■■■□□ 2.8
SSRP1-204ENST00000529002 RIMS1Q86UR5 1692 aaKnown RBP32.53■■■□□ 2.8
SSRP1-204ENST00000529002 FAM9AQ8IZU1 332 aaPredicted RBP32.52■■■□□ 2.8
SSRP1-204ENST00000529002 SAMD9Q5K651 1589 aa32.52■■■□□ 2.8
SSRP1-204ENST00000529002 PLPPR3Q6T4P5 718 aa32.46■■■□□ 2.79
SSRP1-204ENST00000529002 HSPA2P54652 639 aa32.44■■■□□ 2.78
SSRP1-204ENST00000529002 RICTORQ6R327 1708 aa32.43■■■□□ 2.78
SSRP1-204ENST00000529002 NUP153P49790 1475 aaKnown RBP32.43■■■□□ 2.78
SSRP1-204ENST00000529002 ARHGEF40Q8TER5 1519 aa32.43■■■□□ 2.78
SSRP1-204ENST00000529002 RANGAP1P46060 587 aaPredicted RBP32.42■■■□□ 2.78
SSRP1-204ENST00000529002 SIGLEC1Q9BZZ2 1709 aa32.4■■■□□ 2.78
SSRP1-204ENST00000529002 DENND4BO75064 1496 aaPredicted RBP32.36■■■□□ 2.77
SSRP1-204ENST00000529002 FHOD3Q2V2M9 1422 aa32.34■■■□□ 2.77
SSRP1-204ENST00000529002 AKNAQ7Z591 1439 aa32.34■■■□□ 2.77
SSRP1-204ENST00000529002 CSRNP3Q8WYN3 585 aa32.3■■■□□ 2.76
SSRP1-204ENST00000529002 FANCAO15360 1455 aa32.29■■■□□ 2.76
SSRP1-204ENST00000529002 YEATS2Q9ULM3 1422 aa32.28■■■□□ 2.76
SSRP1-204ENST00000529002 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.28■■■□□ 2.764e-7■■□□□ 12.3
SSRP1-204ENST00000529002 PLEKHD1A6NEE1 506 aa32.27■■■□□ 2.76
SSRP1-204ENST00000529002 TTC37Q6PGP7 1564 aa32.27■■■□□ 2.76
SSRP1-204ENST00000529002 MLECQ14165 292 aa32.25■■■□□ 2.75
SSRP1-204ENST00000529002 CFAP74Q9C0B2 1584 aa32.23■■■□□ 2.75
SSRP1-204ENST00000529002 ZMYM4Q5VZL5 1548 aa32.22■■■□□ 2.75
SSRP1-204ENST00000529002 ZFYVE16Q7Z3T8 1539 aa32.22■■■□□ 2.75
SSRP1-204ENST00000529002 FER1L4A9Z1Z3 1794 aa32.22■■■□□ 2.75
SSRP1-204ENST00000529002 POGZQ7Z3K3 1410 aa32.19■■■□□ 2.74
SSRP1-204ENST00000529002 CERKQ8TCT0 537 aa32.19■■■□□ 2.74
SSRP1-204ENST00000529002 HECW1Q76N89 1606 aa32.18■■■□□ 2.74
SSRP1-204ENST00000529002 EFCAB5A4FU69 1503 aa32.16■■■□□ 2.74
SSRP1-204ENST00000529002 CDK13Q14004 1512 aaKnown RBP32.11■■■□□ 2.73
SSRP1-204ENST00000529002 SCAPERQ9BY12 1400 aa32.08■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms