RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 CEP170Q5SW79 1584 aa39.82■■■■□ 3.97
LDLRAD3-203ENST00000528989 NUP160Q12769 1436 aa39.8■■■■□ 3.96
LDLRAD3-203ENST00000528989 CEP162Q5TB80 1403 aa39.72■■■■□ 3.95
LDLRAD3-203ENST00000528989 KIAA0586Q9BVV6 1533 aa39.71■■■■□ 3.95
LDLRAD3-203ENST00000528989 CTTNBP2Q8WZ74 1663 aa39.71■■■■□ 3.95
LDLRAD3-203ENST00000528989 OSCARQ8IYS5 282 aa39.62■■■■□ 3.93
LDLRAD3-203ENST00000528989 IQGAP2Q13576 1575 aa39.62■■■■□ 3.93
LDLRAD3-203ENST00000528989 CLIP1P30622 1438 aa39.6■■■■□ 3.93
LDLRAD3-203ENST00000528989 JPH4Q96JJ6 628 aa39.57■■■■□ 3.92
LDLRAD3-203ENST00000528989 P3H3Q8IVL6 736 aa39.53■■■■□ 3.92
LDLRAD3-203ENST00000528989 ARHGAP35Q9NRY4 1499 aa39.48■■■■□ 3.91
LDLRAD3-203ENST00000528989 CLASP1Q7Z460 1538 aa39.47■■■■□ 3.91
LDLRAD3-203ENST00000528989 UGGT2Q9NYU1 1516 aa39.43■■■■□ 3.9
LDLRAD3-203ENST00000528989 ARAP1Q96P48 1450 aa39.36■■■■□ 3.89
LDLRAD3-203ENST00000528989 DISP1Q96F81 1524 aa39.35■■■■□ 3.89
LDLRAD3-203ENST00000528989 FHOD3Q2V2M9 1422 aa39.33■■■■□ 3.89
LDLRAD3-203ENST00000528989 PRG4Q92954 1404 aaPredicted RBP39.33■■■■□ 3.89
LDLRAD3-203ENST00000528989 SAMD9Q5K651 1589 aa39.32■■■■□ 3.89
LDLRAD3-203ENST00000528989 EFCAB5A4FU69 1503 aa39.31■■■■□ 3.88
LDLRAD3-203ENST00000528989 SHROOM2Q13796 1616 aa39.29■■■■□ 3.88
LDLRAD3-203ENST00000528989 TTBK1Q5TCY1 1321 aaPredicted RBP39.26■■■■□ 3.88
LDLRAD3-203ENST00000528989 KIAA0556O60303 1618 aa39.23■■■■□ 3.87
LDLRAD3-203ENST00000528989 CARMIL2Q6F5E8 1435 aa39.22■■■■□ 3.87
LDLRAD3-203ENST00000528989 ERCC6L2Q5T890 1561 aa39.22■■■■□ 3.87
LDLRAD3-203ENST00000528989 VPS8Q8N3P4 1428 aa39.1■■■■□ 3.85
LDLRAD3-203ENST00000528989 FMN1Q68DA7 1419 aa39.02■■■■□ 3.84
LDLRAD3-203ENST00000528989 PTPRGP23470 1445 aa39■■■■□ 3.83
LDLRAD3-203ENST00000528989 ATP1B4Q9UN42 357 aaPredicted RBP38.97■■■■□ 3.83
LDLRAD3-203ENST00000528989 PLB1Q6P1J6 1458 aa38.9■■■■□ 3.82
LDLRAD3-203ENST00000528989 ARHGEF11O15085 1522 aa38.9■■■■□ 3.82
LDLRAD3-203ENST00000528989 PCF11O94913 1555 aaKnown RBP38.87■■■■□ 3.81
LDLRAD3-203ENST00000528989 CASKIN1Q8WXD9 1431 aa38.87■■■■□ 3.81
LDLRAD3-203ENST00000528989 ARID3CA6NKF2 412 aa38.83■■■■□ 3.81
LDLRAD3-203ENST00000528989 FYCO1Q9BQS8 1478 aa38.78■■■■□ 3.8
LDLRAD3-203ENST00000528989 PPARGC1BQ86YN6 1023 aaKnown RBP38.77■■■■□ 3.8
LDLRAD3-203ENST00000528989 RIMBP3CA6NJZ7 1639 aa38.75■■■■□ 3.79
LDLRAD3-203ENST00000528989 RIMBP3BA6NNM3 1639 aa38.75■■■■□ 3.79
LDLRAD3-203ENST00000528989 RIMBP3Q9UFD9 1639 aa38.75■■■■□ 3.79
LDLRAD3-203ENST00000528989 ABCA8O94911 1581 aa38.74■■■■□ 3.79
LDLRAD3-203ENST00000528989 RAPGEF6Q8TEU7 1601 aa38.73■■■■□ 3.79
LDLRAD3-203ENST00000528989 UACAQ9BZF9 1416 aa38.73■■■■□ 3.79
LDLRAD3-203ENST00000528989 APLP2Q06481 763 aa38.72■■■■□ 3.79
LDLRAD3-203ENST00000528989 NUP153P49790 1475 aaKnown RBP38.71■■■■□ 3.79
LDLRAD3-203ENST00000528989 CYB5RLQ6IPT4 315 aa38.69■■■■□ 3.78
LDLRAD3-203ENST00000528989 HECW1Q76N89 1606 aa38.64■■■■□ 3.78
LDLRAD3-203ENST00000528989 KANK4Q5T7N3 995 aaPredicted RBP38.62■■■■□ 3.77
LDLRAD3-203ENST00000528989 LRRIQ1Q96JM4 1722 aa38.62■■■■□ 3.77
LDLRAD3-203ENST00000528989 EPRSP07814 1512 aaKnown RBP38.61■■■■□ 3.77
LDLRAD3-203ENST00000528989 CDK13Q14004 1512 aaKnown RBP38.6■■■■□ 3.77
LDLRAD3-203ENST00000528989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.59■■■■□ 3.77
LDLRAD3-203ENST00000528989 HNRNPUL2Q1KMD3 747 aaKnown RBP38.59■■■■□ 3.77
LDLRAD3-203ENST00000528989 ABCC2Q92887 1545 aa38.59■■■■□ 3.77
LDLRAD3-203ENST00000528989 ATP10BO94823 1461 aa38.54■■■■□ 3.76
LDLRAD3-203ENST00000528989 TIAM1Q13009 1591 aa38.53■■■■□ 3.76
LDLRAD3-203ENST00000528989 UHRF1BP1LA0JNW5 1464 aa38.53■■■■□ 3.76
LDLRAD3-203ENST00000528989 DNAJC5Q9H3Z4 198 aa38.52■■■■□ 3.76
LDLRAD3-203ENST00000528989 ADCY10Q96PN6 1610 aa38.52■■■■□ 3.76
LDLRAD3-203ENST00000528989 CCDC18Q5T9S5 1454 aa38.51■■■■□ 3.75
LDLRAD3-203ENST00000528989 MAP3K1Q13233 1512 aa38.48■■■■□ 3.75
LDLRAD3-203ENST00000528989 CFAP43Q8NDM7 1665 aa38.43■■■■□ 3.74
LDLRAD3-203ENST00000528989 LRRC9Q6ZRR7 1453 aa38.41■■■■□ 3.74
LDLRAD3-203ENST00000528989 KDM5BQ9UGL1 1544 aa38.4■■■■□ 3.74
LDLRAD3-203ENST00000528989 MAGI3Q5TCQ9 1506 aa38.39■■■■□ 3.74
LDLRAD3-203ENST00000528989 MTUS2Q5JR59 1369 aa38.37■■■■□ 3.73
LDLRAD3-203ENST00000528989 CDK11AQ9UQ88 783 aaPredicted RBP38.35■■■■□ 3.73
LDLRAD3-203ENST00000528989 PLEKHD1A6NEE1 506 aa38.32■■■■□ 3.73
LDLRAD3-203ENST00000528989 ZCCHC11Q5TAX3 1644 aaKnown RBP38.32■■■■□ 3.73
LDLRAD3-203ENST00000528989 NPM1P06748 294 aaKnown RBP eCLIP38.31■■■■□ 3.72
LDLRAD3-203ENST00000528989 TROQ12816 1431 aaPredicted RBP38.21■■■■□ 3.71
LDLRAD3-203ENST00000528989 EHBP1L1Q8N3D4 1523 aa38.2■■■■□ 3.71
LDLRAD3-203ENST00000528989 KCNH8Q96L42 1107 aa38.18■■■■□ 3.7
LDLRAD3-203ENST00000528989 ASXL2Q76L83 1435 aa38.15■■■■□ 3.7
LDLRAD3-203ENST00000528989 NCOA2Q15596 1464 aa38.11■■■■□ 3.69
LDLRAD3-203ENST00000528989 PHLDB1Q86UU1 1377 aa38.09■■■■□ 3.69
LDLRAD3-203ENST00000528989 KIF14Q15058 1648 aa38.07■■■■□ 3.69
LDLRAD3-203ENST00000528989 WDR7Q9Y4E6 1490 aa38.07■■■■□ 3.69
LDLRAD3-203ENST00000528989 SUPT6HQ7KZ85 1726 aaKnown RBP38.05■■■■□ 3.68
LDLRAD3-203ENST00000528989 MAPKBP1O60336 1514 aa37.96■■■■□ 3.67
LDLRAD3-203ENST00000528989 ABCC10Q5T3U5 1492 aa37.94■■■■□ 3.66
LDLRAD3-203ENST00000528989 CCNB3Q8WWL7 1395 aa37.93■■■■□ 3.66
LDLRAD3-203ENST00000528989 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.91■■■■□ 3.66
LDLRAD3-203ENST00000528989 TRIM26Q12899 539 aaPredicted RBP37.89■■■■□ 3.66
LDLRAD3-203ENST00000528989 MYOM3Q5VTT5 1437 aa37.88■■■■□ 3.65
LDLRAD3-203ENST00000528989 GPATCH8Q9UKJ3 1502 aaKnown RBP37.86■■■■□ 3.65
LDLRAD3-203ENST00000528989 TTC37Q6PGP7 1564 aa37.86■■■■□ 3.65
LDLRAD3-203ENST00000528989 FGD6Q6ZV73 1430 aa37.81■■■■□ 3.64
LDLRAD3-203ENST00000528989 CFDP1Q9UEE9 299 aaPredicted RBP37.8■■■■□ 3.64
LDLRAD3-203ENST00000528989 RRBP1Q9P2E9 1410 aaKnown RBP37.8■■■■□ 3.64
LDLRAD3-203ENST00000528989 FAM69CQ0P6D2 419 aa37.76■■■■□ 3.64
LDLRAD3-203ENST00000528989 ZNF644Q9H582 1327 aaPredicted RBP37.76■■■■□ 3.63
LDLRAD3-203ENST00000528989 FAM50AQ14320 339 aaKnown RBP37.75■■■■□ 3.63
LDLRAD3-203ENST00000528989 PCGF6Q9BYE7 350 aa37.75■■■■□ 3.63
LDLRAD3-203ENST00000528989 ZNF777Q9ULD5 760 aaPredicted RBP37.75■■■■□ 3.63
LDLRAD3-203ENST00000528989 CDC42BPAQ5VT25 1732 aa37.73■■■■□ 3.63
LDLRAD3-203ENST00000528989 ABCA9Q8IUA7 1624 aa37.72■■■■□ 3.63
LDLRAD3-203ENST00000528989 MIA2Q96PC5 1412 aa37.7■■■■□ 3.63
LDLRAD3-203ENST00000528989 PLCH2O75038 1416 aa37.7■■■■□ 3.63
LDLRAD3-203ENST00000528989 DIP2BQ9P265 1576 aa37.66■■■■□ 3.62
LDLRAD3-203ENST00000528989 CD109Q6YHK3 1445 aa37.66■■■■□ 3.62
LDLRAD3-203ENST00000528989 CDC42BPBQ9Y5S2 1711 aa37.65■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms