RNA–Protein interactions for RNA: ENST00000528498.5

RDX-204, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-204ENST00000528498 P3H3Q8IVL6 736 aa33.56■■■□□ 2.96
RDX-204ENST00000528498 CTTNBP2Q8WZ74 1663 aa33.53■■■□□ 2.96
RDX-204ENST00000528498 KANK4Q5T7N3 995 aaPredicted RBP33.46■■■□□ 2.95
RDX-204ENST00000528498 GRIN2BQ13224 1484 aa33.44■■■□□ 2.94
RDX-204ENST00000528498 FHOD3Q2V2M9 1422 aa33.42■■■□□ 2.94
RDX-204ENST00000528498 ADAMTS12P58397 1594 aa33.41■■■□□ 2.94
RDX-204ENST00000528498 FHAD1B1AJZ9 1412 aa33.4■■■□□ 2.94
RDX-204ENST00000528498 EIF4G3O43432 1585 aaKnown RBP33.39■■■□□ 2.94
RDX-204ENST00000528498 EFCAB5A4FU69 1503 aa33.3■■■□□ 2.92
RDX-204ENST00000528498 SNAPC4Q5SXM2 1469 aa33.29■■■□□ 2.92
RDX-204ENST00000528498 PCF11O94913 1555 aaKnown RBP33.26■■■□□ 2.91
RDX-204ENST00000528498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.25■■■□□ 2.91
RDX-204ENST00000528498 ATP1B4Q9UN42 357 aaPredicted RBP33.23■■■□□ 2.91
RDX-204ENST00000528498 SAMD9Q5K651 1589 aa33.2■■■□□ 2.91
RDX-204ENST00000528498 TIAM1Q13009 1591 aa33.18■■■□□ 2.9
RDX-204ENST00000528498 HNRNPUL2Q1KMD3 747 aaKnown RBP33.18■■■□□ 2.9
RDX-204ENST00000528498 IQGAP2Q13576 1575 aa33.13■■■□□ 2.89
RDX-204ENST00000528498 GRIN2AQ12879 1464 aa33.1■■■□□ 2.89
RDX-204ENST00000528498 CASKIN1Q8WXD9 1431 aa33.08■■■□□ 2.89
RDX-204ENST00000528498 MAP3K1Q13233 1512 aa33.06■■■□□ 2.88
RDX-204ENST00000528498 FYCO1Q9BQS8 1478 aa33.06■■■□□ 2.88
RDX-204ENST00000528498 FMN1Q68DA7 1419 aa33.06■■■□□ 2.88
RDX-204ENST00000528498 MAGI1Q96QZ7 1491 aaPredicted RBP33.06■■■□□ 2.88
RDX-204ENST00000528498 FBLN2P98095 1184 aa33.06■■■□□ 2.88
RDX-204ENST00000528498 LRRC9Q6ZRR7 1453 aa33.04■■■□□ 2.88
RDX-204ENST00000528498 CCER1Q8TC90 406 aaPredicted RBP33.03■■■□□ 2.88
RDX-204ENST00000528498 CHMP7Q8WUX9 453 aaPredicted RBP33.03■■■□□ 2.88
RDX-204ENST00000528498 CFAP43Q8NDM7 1665 aa33.02■■■□□ 2.88
RDX-204ENST00000528498 SYNJ2O15056 1496 aa33■■■□□ 2.87
RDX-204ENST00000528498 KIAA0586Q9BVV6 1533 aa32.97■■■□□ 2.87
RDX-204ENST00000528498 ZEB1P37275 1124 aaPredicted RBP32.96■■■□□ 2.87
RDX-204ENST00000528498 LRRIQ1Q96JM4 1722 aa32.95■■■□□ 2.87
RDX-204ENST00000528498 CEP170Q5SW79 1584 aa32.94■■■□□ 2.86
RDX-204ENST00000528498 RRBP1Q9P2E9 1410 aaKnown RBP32.94■■■□□ 2.86
RDX-204ENST00000528498 UGGT2Q9NYU1 1516 aa32.92■■■□□ 2.86
RDX-204ENST00000528498 PHLDB1Q86UU1 1377 aa32.88■■■□□ 2.85
RDX-204ENST00000528498 CCNB3Q8WWL7 1395 aa32.86■■■□□ 2.85
RDX-204ENST00000528498 DISP1Q96F81 1524 aa32.85■■■□□ 2.85
RDX-204ENST00000528498 KIAA0556O60303 1618 aa32.8■■■□□ 2.84
RDX-204ENST00000528498 NUP160Q12769 1436 aa32.79■■■□□ 2.84
RDX-204ENST00000528498 ITGAEP38570 1179 aa32.79■■■□□ 2.84
RDX-204ENST00000528498 ARID3CA6NKF2 412 aa32.78■■■□□ 2.84
RDX-204ENST00000528498 MTUS2Q5JR59 1369 aa32.73■■■□□ 2.83
RDX-204ENST00000528498 JPH4Q96JJ6 628 aa32.69■■■□□ 2.82
RDX-204ENST00000528498 MAGI3Q5TCQ9 1506 aa32.68■■■□□ 2.82
RDX-204ENST00000528498 HECW1Q76N89 1606 aa32.67■■■□□ 2.82
RDX-204ENST00000528498 CDK13Q14004 1512 aaKnown RBP32.67■■■□□ 2.82
RDX-204ENST00000528498 FAM50AQ14320 339 aaKnown RBP32.65■■■□□ 2.82
RDX-204ENST00000528498 EPRSP07814 1512 aaKnown RBP32.65■■■□□ 2.82
RDX-204ENST00000528498 CHD1O14646 1710 aa32.62■■■□□ 2.81
RDX-204ENST00000528498 CCDC18Q5T9S5 1454 aa32.6■■■□□ 2.81
RDX-204ENST00000528498 NCOA2Q15596 1464 aa32.57■■■□□ 2.81
RDX-204ENST00000528498 EHBP1L1Q8N3D4 1523 aa32.55■■■□□ 2.8
RDX-204ENST00000528498 NUP153P49790 1475 aaKnown RBP32.54■■■□□ 2.8
RDX-204ENST00000528498 RAPGEF6Q8TEU7 1601 aa32.52■■■□□ 2.8
RDX-204ENST00000528498 PLB1Q6P1J6 1458 aa32.52■■■□□ 2.8
RDX-204ENST00000528498 SUPT6HQ7KZ85 1726 aaKnown RBP32.51■■■□□ 2.8
RDX-204ENST00000528498 FGD6Q6ZV73 1430 aa32.51■■■□□ 2.8
RDX-204ENST00000528498 CARMIL2Q6F5E8 1435 aa32.51■■■□□ 2.79
RDX-204ENST00000528498 ARHGEF11O15085 1522 aa32.43■■■□□ 2.78
RDX-204ENST00000528498 MYOM3Q5VTT5 1437 aa32.43■■■□□ 2.78
RDX-204ENST00000528498 PRG4Q92954 1404 aaPredicted RBP32.42■■■□□ 2.78
RDX-204ENST00000528498 DHX57Q6P158 1386 aaKnown RBP32.41■■■□□ 2.78
RDX-204ENST00000528498 RAB3GAP2Q9H2M9 1393 aa32.37■■■□□ 2.77
RDX-204ENST00000528498 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.35■■■□□ 2.77
RDX-204ENST00000528498 PTPRKQ15262 1439 aa32.31■■■□□ 2.76
RDX-204ENST00000528498 SETD5Q9C0A6 1442 aa32.29■■■□□ 2.76
RDX-204ENST00000528498 PTPN23Q9H3S7 1636 aa32.29■■■□□ 2.76
RDX-204ENST00000528498 ABCA8O94911 1581 aa32.28■■■□□ 2.76
RDX-204ENST00000528498 ERCC6L2Q5T890 1561 aa32.27■■■□□ 2.76
RDX-204ENST00000528498 SHROOM2Q13796 1616 aa32.25■■■□□ 2.75
RDX-204ENST00000528498 PTPRGP23470 1445 aa32.24■■■□□ 2.75
RDX-204ENST00000528498 CDK11AQ9UQ88 783 aaPredicted RBP32.22■■■□□ 2.75
RDX-204ENST00000528498 TROQ12816 1431 aaPredicted RBP32.18■■■□□ 2.74
RDX-204ENST00000528498 ATP10BO94823 1461 aa32.17■■■□□ 2.74
RDX-204ENST00000528498 TCOF1Q13428 1488 aaKnown RBP32.16■■■□□ 2.74
RDX-204ENST00000528498 KIF14Q15058 1648 aa32.15■■■□□ 2.74
RDX-204ENST00000528498 CLASP1Q7Z460 1538 aa32.14■■■□□ 2.74
RDX-204ENST00000528498 ZNF644Q9H582 1327 aaPredicted RBP32.12■■■□□ 2.73
RDX-204ENST00000528498 MIA2Q96PC5 1412 aa32.11■■■□□ 2.73
RDX-204ENST00000528498 CHIC2Q9UKJ5 165 aa32.1■■■□□ 2.73
RDX-204ENST00000528498 CLSPNQ9HAW4 1339 aa32.09■■■□□ 2.73
RDX-204ENST00000528498 MAPKBP1O60336 1514 aa32.06■■■□□ 2.72
RDX-204ENST00000528498 PLEKHD1A6NEE1 506 aa32.05■■■□□ 2.72
RDX-204ENST00000528498 HFM1A2PYH4 1435 aa32.05■■■□□ 2.72
RDX-204ENST00000528498 RRP7BPQ9NSQ0 103 aa32.03■■■□□ 2.72
RDX-204ENST00000528498 UACAQ9BZF9 1416 aa32.03■■■□□ 2.72
RDX-204ENST00000528498 NAIPQ13075 1403 aa32.02■■■□□ 2.72
RDX-204ENST00000528498 ADCY10Q96PN6 1610 aa32.02■■■□□ 2.72
RDX-204ENST00000528498 GPATCH8Q9UKJ3 1502 aaKnown RBP32■■■□□ 2.71
RDX-204ENST00000528498 CFDP1Q9UEE9 299 aaPredicted RBP31.96■■■□□ 2.71
RDX-204ENST00000528498 ZNF777Q9ULD5 760 aaPredicted RBP31.94■■■□□ 2.7
RDX-204ENST00000528498 ABCC10Q5T3U5 1492 aa31.91■■■□□ 2.7
RDX-204ENST00000528498 DAPK1P53355 1430 aa31.91■■■□□ 2.7
RDX-204ENST00000528498 ABCC5O15440 1437 aa31.91■■■□□ 2.7
RDX-204ENST00000528498 ITSN2Q9NZM3 1697 aa31.9■■■□□ 2.7
RDX-204ENST00000528498 CAMSAP2Q08AD1 1489 aa31.89■■■□□ 2.7
RDX-204ENST00000528498 ABCC2Q92887 1545 aa31.89■■■□□ 2.7
RDX-204ENST00000528498 CDC42BPAQ5VT25 1732 aa31.88■■■□□ 2.69
RDX-204ENST00000528498 KDM6BO15054 1643 aa31.88■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms