RNA–Protein interactions for RNA: ENST00000527691.5

GPATCH4-213, Transcript of G-patch domain containing 4, humanhuman

TSL 4

Gene GPATCH4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-213ENST00000527691 EFCAB5A4FU69 1503 aa18.84■□□□□ 0.61
GPATCH4-213ENST00000527691 SYNJ2O15056 1496 aa18.8■□□□□ 0.6
GPATCH4-213ENST00000527691 GRIN2AQ12879 1464 aa18.78■□□□□ 0.6
GPATCH4-213ENST00000527691 TRIM26Q12899 539 aaPredicted RBP18.76■□□□□ 0.59
GPATCH4-213ENST00000527691 SAMD9Q5K651 1589 aa18.76■□□□□ 0.59
GPATCH4-213ENST00000527691 IQGAP2Q13576 1575 aa18.74■□□□□ 0.59
GPATCH4-213ENST00000527691 RANGAP1P46060 587 aaPredicted RBP18.74■□□□□ 0.59
GPATCH4-213ENST00000527691 KIAA0586Q9BVV6 1533 aa18.73■□□□□ 0.59
GPATCH4-213ENST00000527691 UGGT2Q9NYU1 1516 aa18.69■□□□□ 0.58
GPATCH4-213ENST00000527691 NUP160Q12769 1436 aa18.68■□□□□ 0.58
GPATCH4-213ENST00000527691 CHMP7Q8WUX9 453 aaPredicted RBP18.68■□□□□ 0.58
GPATCH4-213ENST00000527691 MAP3K1Q13233 1512 aa18.66■□□□□ 0.58
GPATCH4-213ENST00000527691 APLP2Q06481 763 aa18.66■□□□□ 0.58
GPATCH4-213ENST00000527691 FMN1Q68DA7 1419 aa18.65■□□□□ 0.58
GPATCH4-213ENST00000527691 CEP170Q5SW79 1584 aa18.64■□□□□ 0.58
GPATCH4-213ENST00000527691 PCGF6Q9BYE7 350 aa18.63■□□□□ 0.57
GPATCH4-213ENST00000527691 FHOD3Q2V2M9 1422 aa18.63■□□□□ 0.57
GPATCH4-213ENST00000527691 DNAJC5Q9H3Z4 198 aa18.61■□□□□ 0.57
GPATCH4-213ENST00000527691 FYCO1Q9BQS8 1478 aa18.6■□□□□ 0.57
GPATCH4-213ENST00000527691 CASKIN1Q8WXD9 1431 aa18.6■□□□□ 0.57
GPATCH4-213ENST00000527691 PCF11O94913 1555 aaKnown RBP18.58■□□□□ 0.56
GPATCH4-213ENST00000527691 CHD1O14646 1710 aa18.56■□□□□ 0.56
GPATCH4-213ENST00000527691 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
GPATCH4-213ENST00000527691 FBLN2P98095 1184 aa18.55■□□□□ 0.56
GPATCH4-213ENST00000527691 AEBP2Q6ZN18 517 aaPredicted RBP18.55■□□□□ 0.56
GPATCH4-213ENST00000527691 P3H3Q8IVL6 736 aa18.55■□□□□ 0.56
GPATCH4-213ENST00000527691 KIAA0556O60303 1618 aa18.55■□□□□ 0.56
GPATCH4-213ENST00000527691 DISP1Q96F81 1524 aa18.54■□□□□ 0.56
GPATCH4-213ENST00000527691 CFAP43Q8NDM7 1665 aa18.54■□□□□ 0.56
GPATCH4-213ENST00000527691 PPARGC1BQ86YN6 1023 aaKnown RBP18.54■□□□□ 0.56
GPATCH4-213ENST00000527691 CARMIL2Q6F5E8 1435 aa18.49■□□□□ 0.55
GPATCH4-213ENST00000527691 JPH4Q96JJ6 628 aa18.47■□□□□ 0.55
GPATCH4-213ENST00000527691 LRRC9Q6ZRR7 1453 aa18.46■□□□□ 0.54
GPATCH4-213ENST00000527691 SHROOM2Q13796 1616 aa18.45■□□□□ 0.54
GPATCH4-213ENST00000527691 HECW1Q76N89 1606 aa18.45■□□□□ 0.54
GPATCH4-213ENST00000527691 CCDC18Q5T9S5 1454 aa18.44■□□□□ 0.54
GPATCH4-213ENST00000527691 KANK4Q5T7N3 995 aaPredicted RBP18.43■□□□□ 0.54
GPATCH4-213ENST00000527691 LRRIQ1Q96JM4 1722 aa18.4■□□□□ 0.54
GPATCH4-213ENST00000527691 CLASP1Q7Z460 1538 aa18.39■□□□□ 0.54
GPATCH4-213ENST00000527691 TTBK1Q5TCY1 1321 aaPredicted RBP18.38■□□□□ 0.53
GPATCH4-213ENST00000527691 RAPGEF6Q8TEU7 1601 aa18.38■□□□□ 0.53
GPATCH4-213ENST00000527691 EPRSP07814 1512 aaKnown RBP18.35■□□□□ 0.53
GPATCH4-213ENST00000527691 PRG4Q92954 1404 aaPredicted RBP18.35■□□□□ 0.53
GPATCH4-213ENST00000527691 RRBP1Q9P2E9 1410 aaKnown RBP18.35■□□□□ 0.53
GPATCH4-213ENST00000527691 ATP1B4Q9UN42 357 aaPredicted RBP18.35■□□□□ 0.53
GPATCH4-213ENST00000527691 EHBP1L1Q8N3D4 1523 aa18.33■□□□□ 0.52
GPATCH4-213ENST00000527691 ABCA8O94911 1581 aa18.3■□□□□ 0.52
GPATCH4-213ENST00000527691 NUP153P49790 1475 aaKnown RBP18.3■□□□□ 0.52
GPATCH4-213ENST00000527691 MTUS2Q5JR59 1369 aa18.29■□□□□ 0.52
GPATCH4-213ENST00000527691 SUPT6HQ7KZ85 1726 aaKnown RBP18.27■□□□□ 0.52
GPATCH4-213ENST00000527691 PLB1Q6P1J6 1458 aa18.26■□□□□ 0.51
GPATCH4-213ENST00000527691 PTPRGP23470 1445 aa18.25■□□□□ 0.51
GPATCH4-213ENST00000527691 CCNB3Q8WWL7 1395 aa18.25■□□□□ 0.51
GPATCH4-213ENST00000527691 ARHGEF11O15085 1522 aa18.24■□□□□ 0.51
GPATCH4-213ENST00000527691 CDK13Q14004 1512 aaKnown RBP18.23■□□□□ 0.51
GPATCH4-213ENST00000527691 MAGI3Q5TCQ9 1506 aa18.23■□□□□ 0.51
GPATCH4-213ENST00000527691 PHLDB1Q86UU1 1377 aa18.23■□□□□ 0.51
GPATCH4-213ENST00000527691 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.23■□□□□ 0.51
GPATCH4-213ENST00000527691 NCOA2Q15596 1464 aa18.21■□□□□ 0.51
GPATCH4-213ENST00000527691 CDK11AQ9UQ88 783 aaPredicted RBP18.21■□□□□ 0.51
GPATCH4-213ENST00000527691 ERCC6L2Q5T890 1561 aa18.19■□□□□ 0.5
GPATCH4-213ENST00000527691 UACAQ9BZF9 1416 aa18.17■□□□□ 0.5
GPATCH4-213ENST00000527691 MYOM3Q5VTT5 1437 aa18.16■□□□□ 0.5
GPATCH4-213ENST00000527691 OSCARQ8IYS5 282 aa18.16■□□□□ 0.5
GPATCH4-213ENST00000527691 TROQ12816 1431 aaPredicted RBP18.15■□□□□ 0.5
GPATCH4-213ENST00000527691 FGD6Q6ZV73 1430 aa18.15■□□□□ 0.5
GPATCH4-213ENST00000527691 HRCP23327 699 aa18.15■□□□□ 0.5
GPATCH4-213ENST00000527691 ADCY10Q96PN6 1610 aa18.15■□□□□ 0.5
GPATCH4-213ENST00000527691 ATP10BO94823 1461 aa18.14■□□□□ 0.5
GPATCH4-213ENST00000527691 ABCC2Q92887 1545 aa18.14■□□□□ 0.49
GPATCH4-213ENST00000527691 UHRF1BP1LA0JNW5 1464 aa18.14■□□□□ 0.49
GPATCH4-213ENST00000527691 MIA2Q96PC5 1412 aa18.11■□□□□ 0.49
GPATCH4-213ENST00000527691 HNRNPUL2Q1KMD3 747 aaKnown RBP18.1■□□□□ 0.49
GPATCH4-213ENST00000527691 TCOF1Q13428 1488 aaKnown RBP18.08■□□□□ 0.49
GPATCH4-213ENST00000527691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.07■□□□□ 0.48
GPATCH4-213ENST00000527691 PTPN23Q9H3S7 1636 aa18.06■□□□□ 0.48
GPATCH4-213ENST00000527691 ZEB1P37275 1124 aaPredicted RBP18.06■□□□□ 0.48
GPATCH4-213ENST00000527691 PLEKHD1A6NEE1 506 aa18.05■□□□□ 0.48
GPATCH4-213ENST00000527691 ARID3CA6NKF2 412 aa18.05■□□□□ 0.48
GPATCH4-213ENST00000527691 KDM5BQ9UGL1 1544 aa18.04■□□□□ 0.48
GPATCH4-213ENST00000527691 ITSN2Q9NZM3 1697 aa18.04■□□□□ 0.48
GPATCH4-213ENST00000527691 KIF14Q15058 1648 aa18.04■□□□□ 0.48
GPATCH4-213ENST00000527691 FAM50AQ14320 339 aaKnown RBP18.02■□□□□ 0.48
GPATCH4-213ENST00000527691 ABCC10Q5T3U5 1492 aa18.01■□□□□ 0.47
GPATCH4-213ENST00000527691 ZCCHC11Q5TAX3 1644 aaKnown RBP17.98■□□□□ 0.47
GPATCH4-213ENST00000527691 GPATCH8Q9UKJ3 1502 aaKnown RBP17.98■□□□□ 0.47
GPATCH4-213ENST00000527691 CCER1Q8TC90 406 aaPredicted RBP17.95■□□□□ 0.46
GPATCH4-213ENST00000527691 CDC42BPAQ5VT25 1732 aa17.94■□□□□ 0.46
GPATCH4-213ENST00000527691 SETD5Q9C0A6 1442 aa17.93■□□□□ 0.46
GPATCH4-213ENST00000527691 ITGAEP38570 1179 aa17.92■□□□□ 0.46
GPATCH4-213ENST00000527691 AKNAQ7Z591 1439 aa17.91■□□□□ 0.46
GPATCH4-213ENST00000527691 DNMT1P26358 1616 aaKnown RBP17.9■□□□□ 0.46
GPATCH4-213ENST00000527691 PTPRKQ15262 1439 aa17.89■□□□□ 0.46
GPATCH4-213ENST00000527691 CFDP1Q9UEE9 299 aaPredicted RBP17.89■□□□□ 0.45
GPATCH4-213ENST00000527691 PREX2Q70Z35 1606 aa17.89■□□□□ 0.45
GPATCH4-213ENST00000527691 CLSPNQ9HAW4 1339 aa17.89■□□□□ 0.45
GPATCH4-213ENST00000527691 HFM1A2PYH4 1435 aa17.89■□□□□ 0.45
GPATCH4-213ENST00000527691 CAMSAP2Q08AD1 1489 aa17.88■□□□□ 0.45
GPATCH4-213ENST00000527691 RAB3GAP2Q9H2M9 1393 aa17.87■□□□□ 0.45
GPATCH4-213ENST00000527691 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms