RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 CTTNBP2Q8WZ74 1663 aa26.31■■□□□ 1.8
PCDHA6-202ENST00000527624 CCER1Q8TC90 406 aaPredicted RBP26.29■■□□□ 1.8
PCDHA6-202ENST00000527624 IFT140Q96RY7 1462 aa26.28■■□□□ 1.8
PCDHA6-202ENST00000527624 FHOD3Q2V2M9 1422 aa26.27■■□□□ 1.8
PCDHA6-202ENST00000527624 ZNF608Q9ULD9 1512 aaPredicted RBP26.26■■□□□ 1.79
PCDHA6-202ENST00000527624 PBRM1Q86U86 1689 aa26.26■■□□□ 1.79
PCDHA6-202ENST00000527624 HNRNPUL2Q1KMD3 747 aaKnown RBP26.26■■□□□ 1.79
PCDHA6-202ENST00000527624 EFCAB5A4FU69 1503 aa26.23■■□□□ 1.79
PCDHA6-202ENST00000527624 FHAD1B1AJZ9 1412 aa26.22■■□□□ 1.79
PCDHA6-202ENST00000527624 GRIN2BQ13224 1484 aa26.21■■□□□ 1.79
PCDHA6-202ENST00000527624 THOC2Q8NI27 1593 aaKnown RBP26.19■■□□□ 1.78
PCDHA6-202ENST00000527624 ADAMTS12P58397 1594 aa26.17■■□□□ 1.78
PCDHA6-202ENST00000527624 PCF11O94913 1555 aaKnown RBP26.17■■□□□ 1.78
PCDHA6-202ENST00000527624 ATP1B4Q9UN42 357 aaPredicted RBP26.16■■□□□ 1.78
PCDHA6-202ENST00000527624 TIAM1Q13009 1591 aa26.15■■□□□ 1.78
PCDHA6-202ENST00000527624 MAP3K1Q13233 1512 aa26.11■■□□□ 1.77
PCDHA6-202ENST00000527624 EIF4G3O43432 1585 aaKnown RBP26.08■■□□□ 1.77
PCDHA6-202ENST00000527624 SAMD9Q5K651 1589 aa26.08■■□□□ 1.77
PCDHA6-202ENST00000527624 FYCO1Q9BQS8 1478 aa26.06■■□□□ 1.76
PCDHA6-202ENST00000527624 CASKIN1Q8WXD9 1431 aa26.06■■□□□ 1.76
PCDHA6-202ENST00000527624 FMN1Q68DA7 1419 aa26.06■■□□□ 1.76
PCDHA6-202ENST00000527624 SNAPC4Q5SXM2 1469 aa26.05■■□□□ 1.76
PCDHA6-202ENST00000527624 LRRC9Q6ZRR7 1453 aa26.05■■□□□ 1.76
PCDHA6-202ENST00000527624 RRBP1Q9P2E9 1410 aaKnown RBP26.04■■□□□ 1.76
PCDHA6-202ENST00000527624 CFAP43Q8NDM7 1665 aa26.01■■□□□ 1.76
PCDHA6-202ENST00000527624 IQGAP2Q13576 1575 aa26■■□□□ 1.75
PCDHA6-202ENST00000527624 CCNB3Q8WWL7 1395 aa25.98■■□□□ 1.75
PCDHA6-202ENST00000527624 PHLDB1Q86UU1 1377 aa25.93■■□□□ 1.74
PCDHA6-202ENST00000527624 GRIN2AQ12879 1464 aa25.92■■□□□ 1.74
PCDHA6-202ENST00000527624 MAGI1Q96QZ7 1491 aaPredicted RBP25.9■■□□□ 1.74
PCDHA6-202ENST00000527624 ITGAEP38570 1179 aa25.88■■□□□ 1.73
PCDHA6-202ENST00000527624 CHMP7Q8WUX9 453 aaPredicted RBP25.87■■□□□ 1.73
PCDHA6-202ENST00000527624 KIAA0586Q9BVV6 1533 aa25.86■■□□□ 1.73
PCDHA6-202ENST00000527624 FBLN2P98095 1184 aa25.86■■□□□ 1.73
PCDHA6-202ENST00000527624 UGGT2Q9NYU1 1516 aa25.84■■□□□ 1.73
PCDHA6-202ENST00000527624 SYNJ2O15056 1496 aa25.84■■□□□ 1.73
PCDHA6-202ENST00000527624 LRRIQ1Q96JM4 1722 aa25.82■■□□□ 1.72
PCDHA6-202ENST00000527624 MTUS2Q5JR59 1369 aa25.81■■□□□ 1.72
PCDHA6-202ENST00000527624 FAM50AQ14320 339 aaKnown RBP25.79■■□□□ 1.72
PCDHA6-202ENST00000527624 CEP170Q5SW79 1584 aa25.76■■□□□ 1.71
PCDHA6-202ENST00000527624 DISP1Q96F81 1524 aa25.75■■□□□ 1.71
PCDHA6-202ENST00000527624 KIAA0556O60303 1618 aa25.73■■□□□ 1.71
PCDHA6-202ENST00000527624 HECW1Q76N89 1606 aa25.71■■□□□ 1.71
PCDHA6-202ENST00000527624 ARID3CA6NKF2 412 aa25.71■■□□□ 1.71
PCDHA6-202ENST00000527624 CCDC18Q5T9S5 1454 aa25.7■■□□□ 1.7
PCDHA6-202ENST00000527624 DHX57Q6P158 1386 aaKnown RBP25.68■■□□□ 1.7
PCDHA6-202ENST00000527624 NUP160Q12769 1436 aa25.67■■□□□ 1.7
PCDHA6-202ENST00000527624 EPRSP07814 1512 aaKnown RBP25.67■■□□□ 1.7
PCDHA6-202ENST00000527624 MAGI3Q5TCQ9 1506 aa25.66■■□□□ 1.7
PCDHA6-202ENST00000527624 NCOA2Q15596 1464 aa25.66■■□□□ 1.7
PCDHA6-202ENST00000527624 EHBP1L1Q8N3D4 1523 aa25.66■■□□□ 1.7
PCDHA6-202ENST00000527624 FGD6Q6ZV73 1430 aa25.65■■□□□ 1.7
PCDHA6-202ENST00000527624 CDK13Q14004 1512 aaKnown RBP25.65■■□□□ 1.7
PCDHA6-202ENST00000527624 SUPT6HQ7KZ85 1726 aaKnown RBP25.6■■□□□ 1.69
PCDHA6-202ENST00000527624 RAB3GAP2Q9H2M9 1393 aa25.6■■□□□ 1.69
PCDHA6-202ENST00000527624 JPH4Q96JJ6 628 aa25.6■■□□□ 1.69
PCDHA6-202ENST00000527624 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.57■■□□□ 1.68
PCDHA6-202ENST00000527624 MYOM3Q5VTT5 1437 aa25.57■■□□□ 1.68
PCDHA6-202ENST00000527624 SETD5Q9C0A6 1442 aa25.55■■□□□ 1.68
PCDHA6-202ENST00000527624 NUP153P49790 1475 aaKnown RBP25.54■■□□□ 1.68
PCDHA6-202ENST00000527624 CLSPNQ9HAW4 1339 aa25.53■■□□□ 1.68
PCDHA6-202ENST00000527624 RAPGEF6Q8TEU7 1601 aa25.53■■□□□ 1.68
PCDHA6-202ENST00000527624 CARMIL2Q6F5E8 1435 aa25.53■■□□□ 1.68
PCDHA6-202ENST00000527624 ARHGEF11O15085 1522 aa25.53■■□□□ 1.68
PCDHA6-202ENST00000527624 PLB1Q6P1J6 1458 aa25.49■■□□□ 1.67
PCDHA6-202ENST00000527624 PTPRKQ15262 1439 aa25.44■■□□□ 1.66
PCDHA6-202ENST00000527624 PTPN23Q9H3S7 1636 aa25.43■■□□□ 1.66
PCDHA6-202ENST00000527624 CHD1O14646 1710 aa25.42■■□□□ 1.66
PCDHA6-202ENST00000527624 CDK11AQ9UQ88 783 aaPredicted RBP25.39■■□□□ 1.65
PCDHA6-202ENST00000527624 PRG4Q92954 1404 aaPredicted RBP25.38■■□□□ 1.65
PCDHA6-202ENST00000527624 TCOF1Q13428 1488 aaKnown RBP25.36■■□□□ 1.65
PCDHA6-202ENST00000527624 MAPKBP1O60336 1514 aa25.35■■□□□ 1.65
PCDHA6-202ENST00000527624 ZNF316A6NFI3 1004 aaPredicted RBP25.34■■□□□ 1.65
PCDHA6-202ENST00000527624 MIA2Q96PC5 1412 aa25.33■■□□□ 1.65
PCDHA6-202ENST00000527624 HFM1A2PYH4 1435 aa25.32■■□□□ 1.64
PCDHA6-202ENST00000527624 DIEXFQ68CQ4 756 aaKnown RBP25.32■■□□□ 1.64
PCDHA6-202ENST00000527624 TROQ12816 1431 aaPredicted RBP25.31■■□□□ 1.64
PCDHA6-202ENST00000527624 ABCA8O94911 1581 aa25.3■■□□□ 1.64
PCDHA6-202ENST00000527624 CHIC2Q9UKJ5 165 aa25.28■■□□□ 1.64
PCDHA6-202ENST00000527624 PTPRGP23470 1445 aa25.27■■□□□ 1.64
PCDHA6-202ENST00000527624 NAIPQ13075 1403 aa25.27■■□□□ 1.64
PCDHA6-202ENST00000527624 RRP7BPQ9NSQ0 103 aa25.24■■□□□ 1.63
PCDHA6-202ENST00000527624 ZNF644Q9H582 1327 aaPredicted RBP25.23■■□□□ 1.63
PCDHA6-202ENST00000527624 ATP10BO94823 1461 aa25.22■■□□□ 1.63
PCDHA6-202ENST00000527624 KIF14Q15058 1648 aa25.21■■□□□ 1.63
PCDHA6-202ENST00000527624 SHROOM2Q13796 1616 aa25.2■■□□□ 1.62
PCDHA6-202ENST00000527624 PLEKHD1A6NEE1 506 aa25.19■■□□□ 1.62
PCDHA6-202ENST00000527624 SIN3AQ96ST3 1273 aa25.19■■□□□ 1.62
PCDHA6-202ENST00000527624 NEUROD1Q13562 356 aa25.17■■□□□ 1.62
PCDHA6-202ENST00000527624 CFDP1Q9UEE9 299 aaPredicted RBP25.16■■□□□ 1.62
PCDHA6-202ENST00000527624 ERCC6L2Q5T890 1561 aa25.16■■□□□ 1.62
PCDHA6-202ENST00000527624 ADCY10Q96PN6 1610 aa25.16■■□□□ 1.62
PCDHA6-202ENST00000527624 UACAQ9BZF9 1416 aa25.15■■□□□ 1.62
PCDHA6-202ENST00000527624 GPATCH8Q9UKJ3 1502 aaKnown RBP25.15■■□□□ 1.62
PCDHA6-202ENST00000527624 DAPK1P53355 1430 aa25.14■■□□□ 1.62
PCDHA6-202ENST00000527624 ABCC5O15440 1437 aa25.12■■□□□ 1.61
PCDHA6-202ENST00000527624 ZNF777Q9ULD5 760 aaPredicted RBP25.12■■□□□ 1.61
PCDHA6-202ENST00000527624 AKNAQ7Z591 1439 aa25.11■■□□□ 1.61
PCDHA6-202ENST00000527624 GCC2Q8IWJ2 1684 aa25.09■■□□□ 1.61
PCDHA6-202ENST00000527624 ITSN2Q9NZM3 1697 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms