RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 CUL7Q14999 1698 aa23.09■■□□□ 1.29
CAPN1-207ENST00000527189 PRG4Q92954 1404 aaPredicted RBP23.09■■□□□ 1.29
CAPN1-207ENST00000527189 KIF13AQ9H1H9 1805 aa23.09■■□□□ 1.29
CAPN1-207ENST00000527189 CARMIL1Q5VZK9 1371 aa23.05■■□□□ 1.28
CAPN1-207ENST00000527189 RUSC2Q8N2Y8 1516 aa23.05■■□□□ 1.28
CAPN1-207ENST00000527189 KIAA0586Q9BVV6 1533 aa23.05■■□□□ 1.28
CAPN1-207ENST00000527189 ILDR1Q86SU0 546 aaPredicted RBP22.96■■□□□ 1.27
CAPN1-207ENST00000527189 NPM1P06748 294 aaKnown RBP eCLIP22.87■■□□□ 1.25
CAPN1-207ENST00000527189 RAPGEF2Q9Y4G8 1499 aa22.85■■□□□ 1.25
CAPN1-207ENST00000527189 CARMIL2Q6F5E8 1435 aa22.83■■□□□ 1.25
CAPN1-207ENST00000527189 PTPRGP23470 1445 aa22.8■■□□□ 1.24
CAPN1-207ENST00000527189 IQGAP2Q13576 1575 aa22.8■■□□□ 1.24
CAPN1-207ENST00000527189 KDM4FA0A1W2PPD8 638 aa22.79■■□□□ 1.24
CAPN1-207ENST00000527189 TNIKQ9UKE5 1360 aa22.77■■□□□ 1.24
CAPN1-207ENST00000527189 ADCY10Q96PN6 1610 aa22.75■■□□□ 1.23
CAPN1-207ENST00000527189 MAPKBP1O60336 1514 aa22.74■■□□□ 1.23
CAPN1-207ENST00000527189 ABCC10Q5T3U5 1492 aa22.71■■□□□ 1.23
CAPN1-207ENST00000527189 UGGT2Q9NYU1 1516 aa22.7■■□□□ 1.22
CAPN1-207ENST00000527189 DIP2BQ9P265 1576 aa22.69■■□□□ 1.22
CAPN1-207ENST00000527189 FAM69CQ0P6D2 419 aa22.69■■□□□ 1.22
CAPN1-207ENST00000527189 DISP1Q96F81 1524 aa22.68■■□□□ 1.22
CAPN1-207ENST00000527189 KDM6BO15054 1643 aa22.68■■□□□ 1.22
CAPN1-207ENST00000527189 PRXQ9BXM0 1461 aa22.66■■□□□ 1.22
CAPN1-207ENST00000527189 TTBK1Q5TCY1 1321 aaPredicted RBP22.65■■□□□ 1.22
CAPN1-207ENST00000527189 UHRF1BP1LA0JNW5 1464 aa22.63■■□□□ 1.21
CAPN1-207ENST00000527189 UACAQ9BZF9 1416 aa22.63■■□□□ 1.21
CAPN1-207ENST00000527189 ABCC2Q92887 1545 aa22.62■■□□□ 1.21
CAPN1-207ENST00000527189 TSPOAP1O95153 1857 aa22.62■■□□□ 1.21
CAPN1-207ENST00000527189 CSRNP3Q8WYN3 585 aa22.59■■□□□ 1.21
CAPN1-207ENST00000527189 KIAA0556O60303 1618 aa22.57■■□□□ 1.2
CAPN1-207ENST00000527189 CTTNBP2Q8WZ74 1663 aa22.56■■□□□ 1.2
CAPN1-207ENST00000527189 GOLGA3Q08378 1498 aa22.56■■□□□ 1.2
CAPN1-207ENST00000527189 PLB1Q6P1J6 1458 aa22.54■■□□□ 1.2
CAPN1-207ENST00000527189 EEA1Q15075 1411 aa22.54■■□□□ 1.2
CAPN1-207ENST00000527189 KDM5BQ9UGL1 1544 aa22.52■■□□□ 1.19
CAPN1-207ENST00000527189 ASXL2Q76L83 1435 aa22.51■■□□□ 1.19
CAPN1-207ENST00000527189 FAM9AQ8IZU1 332 aaPredicted RBP22.47■■□□□ 1.19
CAPN1-207ENST00000527189 HECW2Q9P2P5 1572 aa22.46■■□□□ 1.19
CAPN1-207ENST00000527189 GLI2P10070 1586 aa22.45■■□□□ 1.18
CAPN1-207ENST00000527189 ADGRL1O94910 1474 aa22.43■■□□□ 1.18
CAPN1-207ENST00000527189 PPRC1Q5VV67 1664 aaKnown RBP22.39■■□□□ 1.18
CAPN1-207ENST00000527189 ZCCHC11Q5TAX3 1644 aaKnown RBP22.39■■□□□ 1.18
CAPN1-207ENST00000527189 ABCA8O94911 1581 aa22.38■■□□□ 1.17
CAPN1-207ENST00000527189 EPRSP07814 1512 aaKnown RBP22.37■■□□□ 1.17
CAPN1-207ENST00000527189 WDR7Q9Y4E6 1490 aa22.33■■□□□ 1.16
CAPN1-207ENST00000527189 P3H3Q8IVL6 736 aa22.32■■□□□ 1.16
CAPN1-207ENST00000527189 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
CAPN1-207ENST00000527189 SAMD9Q5K651 1589 aa22.29■■□□□ 1.16
CAPN1-207ENST00000527189 MAP3K4Q9Y6R4 1608 aa22.28■■□□□ 1.16
CAPN1-207ENST00000527189 TEX14Q8IWB6 1497 aa22.28■■□□□ 1.16
CAPN1-207ENST00000527189 KIF21BO75037 1637 aa22.25■■□□□ 1.15
CAPN1-207ENST00000527189 KCNH8Q96L42 1107 aa22.23■■□□□ 1.15
CAPN1-207ENST00000527189 ATP10BO94823 1461 aa22.22■■□□□ 1.15
CAPN1-207ENST00000527189 COL17A1Q9UMD9 1497 aaPredicted RBP22.22■■□□□ 1.15
CAPN1-207ENST00000527189 CD109Q6YHK3 1445 aa22.2■■□□□ 1.14
CAPN1-207ENST00000527189 MAGI3Q5TCQ9 1506 aa22.18■■□□□ 1.14
CAPN1-207ENST00000527189 RANGAP1P46060 587 aaPredicted RBP22.17■■□□□ 1.14
CAPN1-207ENST00000527189 CFAP43Q8NDM7 1665 aa22.17■■□□□ 1.14
CAPN1-207ENST00000527189 RAPGEF6Q8TEU7 1601 aa22.16■■□□□ 1.14
CAPN1-207ENST00000527189 EFCAB5A4FU69 1503 aa22.15■■□□□ 1.14
CAPN1-207ENST00000527189 ARID3CA6NKF2 412 aa22.14■■□□□ 1.13
CAPN1-207ENST00000527189 FHOD3Q2V2M9 1422 aa22.14■■□□□ 1.13
CAPN1-207ENST00000527189 UBTFP17480 764 aaKnown RBP22.13■■□□□ 1.13
CAPN1-207ENST00000527189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.11■■□□□ 1.13
CAPN1-207ENST00000527189 HNRNPUL2Q1KMD3 747 aaKnown RBP22.11■■□□□ 1.13
CAPN1-207ENST00000527189 FBXO41Q8TF61 875 aa22.11■■□□□ 1.13
CAPN1-207ENST00000527189 NUP153P49790 1475 aaKnown RBP22.09■■□□□ 1.13
CAPN1-207ENST00000527189 PHLDB1Q86UU1 1377 aa22.06■■□□□ 1.12
CAPN1-207ENST00000527189 PLEKHD1A6NEE1 506 aa22.05■■□□□ 1.12
CAPN1-207ENST00000527189 ABCA9Q8IUA7 1624 aa22.04■■□□□ 1.12
CAPN1-207ENST00000527189 EHMT2Q96KQ7 1210 aa22.01■■□□□ 1.11
CAPN1-207ENST00000527189 ARAP3Q8WWN8 1544 aa22.01■■□□□ 1.11
CAPN1-207ENST00000527189 FMN1Q68DA7 1419 aa21.99■■□□□ 1.11
CAPN1-207ENST00000527189 NEO1Q92859 1461 aa21.96■■□□□ 1.11
CAPN1-207ENST00000527189 ARHGAP35Q9NRY4 1499 aa21.96■■□□□ 1.11
CAPN1-207ENST00000527189 CDK11AQ9UQ88 783 aaPredicted RBP21.89■■□□□ 1.09
CAPN1-207ENST00000527189 ATP1B4Q9UN42 357 aaPredicted RBP21.87■■□□□ 1.09
CAPN1-207ENST00000527189 HECW1Q76N89 1606 aa21.86■■□□□ 1.09
CAPN1-207ENST00000527189 CDK13Q14004 1512 aaKnown RBP21.85■■□□□ 1.09
CAPN1-207ENST00000527189 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.85■■□□□ 1.091e-9■■■■□ 24
CAPN1-207ENST00000527189 RAPGEF3O95398 923 aa21.85■■□□□ 1.09
CAPN1-207ENST00000527189 LMTK3Q96Q04 1460 aa21.83■■□□□ 1.08
CAPN1-207ENST00000527189 AKNAQ7Z591 1439 aa21.81■■□□□ 1.08
CAPN1-207ENST00000527189 FANCAO15360 1455 aa21.81■■□□□ 1.08
CAPN1-207ENST00000527189 CFAP74Q9C0B2 1584 aa21.78■■□□□ 1.08
CAPN1-207ENST00000527189 DENND4BO75064 1496 aaPredicted RBP21.78■■□□□ 1.08
CAPN1-207ENST00000527189 PLCH2O75038 1416 aa21.78■■□□□ 1.08
CAPN1-207ENST00000527189 ADAMTSL3P82987 1691 aa21.78■■□□□ 1.08
CAPN1-207ENST00000527189 TTC37Q6PGP7 1564 aa21.77■■□□□ 1.08
CAPN1-207ENST00000527189 CASKIN1Q8WXD9 1431 aa21.75■■□□□ 1.07
CAPN1-207ENST00000527189 PTPRMP28827 1452 aa21.75■■□□□ 1.07
CAPN1-207ENST00000527189 TROQ12816 1431 aaPredicted RBP21.74■■□□□ 1.07
CAPN1-207ENST00000527189 FRMPD1Q5SYB0 1578 aa21.74■■□□□ 1.07
CAPN1-207ENST00000527189 EFCAB2Q5VUJ9 269 aa21.73■■□□□ 1.07
CAPN1-207ENST00000527189 CLIP1P30622 1438 aa21.72■■□□□ 1.07
CAPN1-207ENST00000527189 PCF11O94913 1555 aaKnown RBP21.71■■□□□ 1.07
CAPN1-207ENST00000527189 CCDC18Q5T9S5 1454 aa21.71■■□□□ 1.07
CAPN1-207ENST00000527189 RICTORQ6R327 1708 aa21.69■■□□□ 1.06
CAPN1-207ENST00000527189 MAGI2Q86UL8 1455 aa21.68■■□□□ 1.06
CAPN1-207ENST00000527189 KIF14Q15058 1648 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms