RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
SSSCA1-203ENST00000526877 PRG4Q92954 1404 aaPredicted RBP21.29■■□□□ 1
SSSCA1-203ENST00000526877 TRHP20396 242 aaPredicted RBP21.28■■□□□ 1
SSSCA1-203ENST00000526877 CARMIL1Q5VZK9 1371 aa21.26■□□□□ 0.99
SSSCA1-203ENST00000526877 KIAA0586Q9BVV6 1533 aa21.24■□□□□ 0.99
SSSCA1-203ENST00000526877 RAPGEF2Q9Y4G8 1499 aa21.09■□□□□ 0.97
SSSCA1-203ENST00000526877 IQGAP2Q13576 1575 aa21.04■□□□□ 0.96
SSSCA1-203ENST00000526877 ADCY10Q96PN6 1610 aa21.01■□□□□ 0.95
SSSCA1-203ENST00000526877 PTPRGP23470 1445 aa20.99■□□□□ 0.95
SSSCA1-203ENST00000526877 CARMIL2Q6F5E8 1435 aa20.98■□□□□ 0.95
SSSCA1-203ENST00000526877 DISP1Q96F81 1524 aa20.97■□□□□ 0.95
SSSCA1-203ENST00000526877 TNIKQ9UKE5 1360 aa20.97■□□□□ 0.95
SSSCA1-203ENST00000526877 PRXQ9BXM0 1461 aa20.96■□□□□ 0.95
SSSCA1-203ENST00000526877 KIF13AQ9H1H9 1805 aa20.95■□□□□ 0.94
SSSCA1-203ENST00000526877 UGGT2Q9NYU1 1516 aa20.95■□□□□ 0.94
SSSCA1-203ENST00000526877 NPM1P06748 294 aaKnown RBP eCLIP20.95■□□□□ 0.94
SSSCA1-203ENST00000526877 MAPKBP1O60336 1514 aa20.93■□□□□ 0.94
SSSCA1-203ENST00000526877 TTBK1Q5TCY1 1321 aaPredicted RBP20.9■□□□□ 0.94
SSSCA1-203ENST00000526877 CTTNBP2Q8WZ74 1663 aa20.89■□□□□ 0.93
SSSCA1-203ENST00000526877 ABCC10Q5T3U5 1492 aa20.88■□□□□ 0.93
SSSCA1-203ENST00000526877 CSRNP3Q8WYN3 585 aa20.87■□□□□ 0.93
SSSCA1-203ENST00000526877 KIAA0556O60303 1618 aa20.86■□□□□ 0.93
SSSCA1-203ENST00000526877 FAM69CQ0P6D2 419 aa20.85■□□□□ 0.93
SSSCA1-203ENST00000526877 UHRF1BP1LA0JNW5 1464 aa20.85■□□□□ 0.93
SSSCA1-203ENST00000526877 UACAQ9BZF9 1416 aa20.84■□□□□ 0.93
SSSCA1-203ENST00000526877 ABCC2Q92887 1545 aa20.83■□□□□ 0.93
SSSCA1-203ENST00000526877 DIP2BQ9P265 1576 aa20.83■□□□□ 0.92
SSSCA1-203ENST00000526877 EEA1Q15075 1411 aa20.79■□□□□ 0.92
SSSCA1-203ENST00000526877 FAM9AQ8IZU1 332 aaPredicted RBP20.78■□□□□ 0.92
SSSCA1-203ENST00000526877 GOLGA3Q08378 1498 aa20.76■□□□□ 0.91
SSSCA1-203ENST00000526877 KDM5BQ9UGL1 1544 aa20.76■□□□□ 0.91
SSSCA1-203ENST00000526877 ASXL2Q76L83 1435 aa20.74■□□□□ 0.91
SSSCA1-203ENST00000526877 PLB1Q6P1J6 1458 aa20.72■□□□□ 0.91
SSSCA1-203ENST00000526877 ZCCHC11Q5TAX3 1644 aaKnown RBP20.68■□□□□ 0.9
SSSCA1-203ENST00000526877 ABCA8O94911 1581 aa20.68■□□□□ 0.9
SSSCA1-203ENST00000526877 TSPOAP1O95153 1857 aa20.67■□□□□ 0.9
SSSCA1-203ENST00000526877 GLI2P10070 1586 aa20.67■□□□□ 0.9
SSSCA1-203ENST00000526877 P3H3Q8IVL6 736 aa20.64■□□□□ 0.89
SSSCA1-203ENST00000526877 SAMD9Q5K651 1589 aa20.63■□□□□ 0.89
SSSCA1-203ENST00000526877 EPRSP07814 1512 aaKnown RBP20.63■□□□□ 0.89
SSSCA1-203ENST00000526877 KIF21BO75037 1637 aa20.6■□□□□ 0.89
SSSCA1-203ENST00000526877 PPRC1Q5VV67 1664 aaKnown RBP20.6■□□□□ 0.89
SSSCA1-203ENST00000526877 WDR7Q9Y4E6 1490 aa20.56■□□□□ 0.88
SSSCA1-203ENST00000526877 KDM6BO15054 1643 aa20.56■□□□□ 0.88
SSSCA1-203ENST00000526877 MAP3K4Q9Y6R4 1608 aa20.56■□□□□ 0.88
SSSCA1-203ENST00000526877 ATP10BO94823 1461 aa20.52■□□□□ 0.88
SSSCA1-203ENST00000526877 LOC105371045A0A1W2PR82 267 aa20.51■□□□□ 0.87
SSSCA1-203ENST00000526877 RANGAP1P46060 587 aaPredicted RBP20.51■□□□□ 0.87
SSSCA1-203ENST00000526877 FHOD3Q2V2M9 1422 aa20.48■□□□□ 0.87
SSSCA1-203ENST00000526877 KCNH8Q96L42 1107 aa20.48■□□□□ 0.87
SSSCA1-203ENST00000526877 RAPGEF6Q8TEU7 1601 aa20.48■□□□□ 0.87
SSSCA1-203ENST00000526877 ARID3CA6NKF2 412 aa20.47■□□□□ 0.87
SSSCA1-203ENST00000526877 COL17A1Q9UMD9 1497 aaPredicted RBP20.47■□□□□ 0.87
SSSCA1-203ENST00000526877 EHMT2Q96KQ7 1210 aa20.46■□□□□ 0.87
SSSCA1-203ENST00000526877 TEX14Q8IWB6 1497 aa20.44■□□□□ 0.86
SSSCA1-203ENST00000526877 EFCAB5A4FU69 1503 aa20.43■□□□□ 0.86
SSSCA1-203ENST00000526877 CFAP43Q8NDM7 1665 aa20.43■□□□□ 0.86
SSSCA1-203ENST00000526877 UBTFP17480 764 aaKnown RBP20.43■□□□□ 0.86
SSSCA1-203ENST00000526877 CD109Q6YHK3 1445 aa20.43■□□□□ 0.86
SSSCA1-203ENST00000526877 NUP153P49790 1475 aaKnown RBP20.43■□□□□ 0.86
SSSCA1-203ENST00000526877 AEBP2Q6ZN18 517 aaPredicted RBP20.42■□□□□ 0.86
SSSCA1-203ENST00000526877 MAGI3Q5TCQ9 1506 aa20.42■□□□□ 0.86
SSSCA1-203ENST00000526877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
SSSCA1-203ENST00000526877 HNRNPUL2Q1KMD3 747 aaKnown RBP20.34■□□□□ 0.85
SSSCA1-203ENST00000526877 ABCA9Q8IUA7 1624 aa20.34■□□□□ 0.85
SSSCA1-203ENST00000526877 ARHGAP35Q9NRY4 1499 aa20.33■□□□□ 0.85
SSSCA1-203ENST00000526877 KDM4FA0A1W2PPD8 638 aa20.32■□□□□ 0.84
SSSCA1-203ENST00000526877 PLEKHD1A6NEE1 506 aa20.29■□□□□ 0.84
SSSCA1-203ENST00000526877 ARAP3Q8WWN8 1544 aa20.26■□□□□ 0.83
SSSCA1-203ENST00000526877 FMN1Q68DA7 1419 aa20.26■□□□□ 0.83
SSSCA1-203ENST00000526877 CDK13Q14004 1512 aaKnown RBP20.23■□□□□ 0.83
SSSCA1-203ENST00000526877 PHLDB1Q86UU1 1377 aa20.22■□□□□ 0.83
SSSCA1-203ENST00000526877 NEO1Q92859 1461 aa20.19■□□□□ 0.82
SSSCA1-203ENST00000526877 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.19■□□□□ 0.82
SSSCA1-203ENST00000526877 HECW1Q76N89 1606 aa20.18■□□□□ 0.82
SSSCA1-203ENST00000526877 ATP1B4Q9UN42 357 aaPredicted RBP20.17■□□□□ 0.82
SSSCA1-203ENST00000526877 CEP162Q5TB80 1403 aa20.16■□□□□ 0.82
SSSCA1-203ENST00000526877 ADGRL1O94910 1474 aa20.15■□□□□ 0.82
SSSCA1-203ENST00000526877 LRRIQ1Q96JM4 1722 aa20.14■□□□□ 0.81
SSSCA1-203ENST00000526877 TTC37Q6PGP7 1564 aa20.14■□□□□ 0.81
SSSCA1-203ENST00000526877 RAPGEF3O95398 923 aa20.14■□□□□ 0.81
SSSCA1-203ENST00000526877 CDK11AQ9UQ88 783 aaPredicted RBP20.1■□□□□ 0.81
SSSCA1-203ENST00000526877 FANCAO15360 1455 aa20.1■□□□□ 0.81
SSSCA1-203ENST00000526877 CLIP1P30622 1438 aa20.1■□□□□ 0.81
SSSCA1-203ENST00000526877 AKNAQ7Z591 1439 aa20.1■□□□□ 0.81
SSSCA1-203ENST00000526877 CASKIN1Q8WXD9 1431 aa20.1■□□□□ 0.81
SSSCA1-203ENST00000526877 FRMPD1Q5SYB0 1578 aa20.09■□□□□ 0.81
SSSCA1-203ENST00000526877 PLCH2O75038 1416 aa20.08■□□□□ 0.8
SSSCA1-203ENST00000526877 PCF11O94913 1555 aaKnown RBP20.06■□□□□ 0.8
SSSCA1-203ENST00000526877 TROQ12816 1431 aaPredicted RBP20.06■□□□□ 0.8
SSSCA1-203ENST00000526877 KIF14Q15058 1648 aa20.05■□□□□ 0.8
SSSCA1-203ENST00000526877 DENND4BO75064 1496 aaPredicted RBP20.05■□□□□ 0.8
SSSCA1-203ENST00000526877 RICTORQ6R327 1708 aa20.05■□□□□ 0.8
SSSCA1-203ENST00000526877 CFAP74Q9C0B2 1584 aa20.04■□□□□ 0.8
SSSCA1-203ENST00000526877 CCDC18Q5T9S5 1454 aa20.01■□□□□ 0.79
SSSCA1-203ENST00000526877 FYCO1Q9BQS8 1478 aa20■□□□□ 0.79
SSSCA1-203ENST00000526877 MYO5CQ9NQX4 1742 aa20■□□□□ 0.79
SSSCA1-203ENST00000526877 EFCAB2Q5VUJ9 269 aa19.99■□□□□ 0.79
SSSCA1-203ENST00000526877 SCAPERQ9BY12 1400 aa19.97■□□□□ 0.79
SSSCA1-203ENST00000526877 ZMYM4Q5VZL5 1548 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms