RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 FHAD1B1AJZ9 1412 aa25.26■■□□□ 1.63
SSRP1-203ENST00000526696 TSPOAP1O95153 1857 aa25.23■■□□□ 1.63
SSRP1-203ENST00000526696 JPH4Q96JJ6 628 aa25.21■■□□□ 1.63
SSRP1-203ENST00000526696 ADCY10Q96PN6 1610 aa25.19■■□□□ 1.62
SSRP1-203ENST00000526696 NPM1P06748 294 aaKnown RBP eCLIP25.16■■□□□ 1.62
SSRP1-203ENST00000526696 WRNQ14191 1432 aaPredicted RBP eCLIP25.14■■□□□ 1.62
SSRP1-203ENST00000526696 ERICH3Q5RHP9 1530 aa25.11■■□□□ 1.61
SSRP1-203ENST00000526696 ADGRL1O94910 1474 aa25.09■■□□□ 1.61
SSRP1-203ENST00000526696 HECW2Q9P2P5 1572 aa25.08■■□□□ 1.61
SSRP1-203ENST00000526696 RUSC2Q8N2Y8 1516 aa25.07■■□□□ 1.6
SSRP1-203ENST00000526696 BIVM-ERCC5R4GMW8 1640 aa24.99■■□□□ 1.59
SSRP1-203ENST00000526696 PPRC1Q5VV67 1664 aaKnown RBP24.98■■□□□ 1.59
SSRP1-203ENST00000526696 TOP2BQ02880 1626 aa24.98■■□□□ 1.59
SSRP1-203ENST00000526696 COL17A1Q9UMD9 1497 aaPredicted RBP24.91■■□□□ 1.58
SSRP1-203ENST00000526696 GLI2P10070 1586 aa24.84■■□□□ 1.57
SSRP1-203ENST00000526696 KIAA0586Q9BVV6 1533 aa24.81■■□□□ 1.56
SSRP1-203ENST00000526696 FBXO41Q8TF61 875 aa24.8■■□□□ 1.56
SSRP1-203ENST00000526696 ASXL2Q76L83 1435 aa24.79■■□□□ 1.56
SSRP1-203ENST00000526696 ABCC2Q92887 1545 aa24.77■■□□□ 1.56
SSRP1-203ENST00000526696 PTPRGP23470 1445 aa24.77■■□□□ 1.56
SSRP1-203ENST00000526696 PLB1Q6P1J6 1458 aa24.75■■□□□ 1.55
SSRP1-203ENST00000526696 TTBK1Q5TCY1 1321 aaPredicted RBP24.71■■□□□ 1.55
SSRP1-203ENST00000526696 CUL7Q14999 1698 aa24.7■■□□□ 1.54
SSRP1-203ENST00000526696 MAP3K4Q9Y6R4 1608 aa24.69■■□□□ 1.54
SSRP1-203ENST00000526696 EPRSP07814 1512 aaKnown RBP24.66■■□□□ 1.54
SSRP1-203ENST00000526696 TNIKQ9UKE5 1360 aa24.64■■□□□ 1.53
SSRP1-203ENST00000526696 IGF1RP08069 1367 aa24.62■■□□□ 1.53
SSRP1-203ENST00000526696 UHRF1BP1LA0JNW5 1464 aa24.62■■□□□ 1.53
SSRP1-203ENST00000526696 TEX14Q8IWB6 1497 aa24.59■■□□□ 1.53
SSRP1-203ENST00000526696 UACAQ9BZF9 1416 aa24.55■■□□□ 1.52
SSRP1-203ENST00000526696 CARMIL2Q6F5E8 1435 aa24.53■■□□□ 1.52
SSRP1-203ENST00000526696 KDM5BQ9UGL1 1544 aa24.53■■□□□ 1.52
SSRP1-203ENST00000526696 ZCCHC11Q5TAX3 1644 aaKnown RBP24.48■■□□□ 1.51
SSRP1-203ENST00000526696 KIF21BO75037 1637 aa24.46■■□□□ 1.51
SSRP1-203ENST00000526696 DISP1Q96F81 1524 aa24.45■■□□□ 1.51
SSRP1-203ENST00000526696 SUPT5HO00267 1087 aaKnown RBP24.45■■□□□ 1.5
SSRP1-203ENST00000526696 LMTK3Q96Q04 1460 aa24.44■■□□□ 1.5
SSRP1-203ENST00000526696 IQGAP2Q13576 1575 aa24.43■■□□□ 1.5
SSRP1-203ENST00000526696 KIF27Q86VH2 1401 aa24.42■■□□□ 1.5
SSRP1-203ENST00000526696 CARMIL1Q5VZK9 1371 aa24.39■■□□□ 1.49
SSRP1-203ENST00000526696 WDR7Q9Y4E6 1490 aa24.38■■□□□ 1.49
SSRP1-203ENST00000526696 MAGI3Q5TCQ9 1506 aa24.36■■□□□ 1.49
SSRP1-203ENST00000526696 PTPRMP28827 1452 aa24.35■■□□□ 1.49
SSRP1-203ENST00000526696 CD109Q6YHK3 1445 aa24.33■■□□□ 1.49
SSRP1-203ENST00000526696 ADAMTSL3P82987 1691 aa24.32■■□□□ 1.48
SSRP1-203ENST00000526696 CFAP43Q8NDM7 1665 aa24.3■■□□□ 1.48
SSRP1-203ENST00000526696 ILDR2Q71H61 639 aa24.29■■□□□ 1.48
SSRP1-203ENST00000526696 UGGT2Q9NYU1 1516 aa24.26■■□□□ 1.47
SSRP1-203ENST00000526696 PCF11O94913 1555 aaKnown RBP24.26■■□□□ 1.47
SSRP1-203ENST00000526696 KIAA0556O60303 1618 aa24.25■■□□□ 1.47
SSRP1-203ENST00000526696 KCNH8Q96L42 1107 aa24.23■■□□□ 1.47
SSRP1-203ENST00000526696 ARAP3Q8WWN8 1544 aa24.21■■□□□ 1.47
SSRP1-203ENST00000526696 SOCS7O14512 581 aa24.2■■□□□ 1.46
SSRP1-203ENST00000526696 MADDQ8WXG6 1647 aa24.16■■□□□ 1.46
SSRP1-203ENST00000526696 BCORL1Q5H9F3 1711 aa24.15■■□□□ 1.46
SSRP1-203ENST00000526696 CERKQ8TCT0 537 aa24.12■■□□□ 1.45
SSRP1-203ENST00000526696 DISP3Q9P2K9 1392 aa24.12■■□□□ 1.45
SSRP1-203ENST00000526696 HSPA2P54652 639 aa24.11■■□□□ 1.45
SSRP1-203ENST00000526696 ABCA8O94911 1581 aa24.11■■□□□ 1.45
SSRP1-203ENST00000526696 RAPGEF3O95398 923 aa24.06■■□□□ 1.44
SSRP1-203ENST00000526696 RAPGEF2Q9Y4G8 1499 aa24.04■■□□□ 1.44
SSRP1-203ENST00000526696 RIMS1Q86UR5 1692 aaKnown RBP24.03■■□□□ 1.44
SSRP1-203ENST00000526696 FRMPD1Q5SYB0 1578 aa24.01■■□□□ 1.43
SSRP1-203ENST00000526696 ARID4BQ4LE39 1312 aaPredicted RBP23.99■■□□□ 1.43
SSRP1-203ENST00000526696 PHLDB1Q86UU1 1377 aa23.97■■□□□ 1.43
SSRP1-203ENST00000526696 ABCA9Q8IUA7 1624 aa23.97■■□□□ 1.43
SSRP1-203ENST00000526696 ARID3CA6NKF2 412 aa23.93■■□□□ 1.42
SSRP1-203ENST00000526696 ATP10BO94823 1461 aa23.91■■□□□ 1.42
SSRP1-203ENST00000526696 CTTNBP2Q8WZ74 1663 aa23.9■■□□□ 1.42
SSRP1-203ENST00000526696 GOLGA3Q08378 1498 aa23.9■■□□□ 1.42
SSRP1-203ENST00000526696 NEO1Q92859 1461 aa23.9■■□□□ 1.42
SSRP1-203ENST00000526696 PLPPR3Q6T4P5 718 aa23.9■■□□□ 1.42
SSRP1-203ENST00000526696 ARHGEF40Q8TER5 1519 aa23.89■■□□□ 1.41
SSRP1-203ENST00000526696 SPATA31D1Q6ZQQ2 1576 aa23.88■■□□□ 1.41
SSRP1-203ENST00000526696 SIGLEC1Q9BZZ2 1709 aa23.87■■□□□ 1.41
SSRP1-203ENST00000526696 RICTORQ6R327 1708 aa23.81■■□□□ 1.4
SSRP1-203ENST00000526696 STRCQ7RTU9 1775 aa23.75■■□□□ 1.39
SSRP1-203ENST00000526696 FANCAO15360 1455 aa23.74■■□□□ 1.39
SSRP1-203ENST00000526696 DENND4BO75064 1496 aaPredicted RBP23.74■■□□□ 1.39
SSRP1-203ENST00000526696 FHOD3Q2V2M9 1422 aa23.73■■□□□ 1.39
SSRP1-203ENST00000526696 TTC37Q6PGP7 1564 aa23.73■■□□□ 1.39
SSRP1-203ENST00000526696 FER1L4A9Z1Z3 1794 aa23.73■■□□□ 1.39
SSRP1-203ENST00000526696 POGZQ7Z3K3 1410 aa23.72■■□□□ 1.39
SSRP1-203ENST00000526696 YEATS2Q9ULM3 1422 aa23.72■■□□□ 1.39
SSRP1-203ENST00000526696 AKNAQ7Z591 1439 aa23.7■■□□□ 1.38
SSRP1-203ENST00000526696 P3H3Q8IVL6 736 aa23.7■■□□□ 1.38
SSRP1-203ENST00000526696 PREX1Q8TCU6 1659 aa23.68■■□□□ 1.38
SSRP1-203ENST00000526696 MLECQ14165 292 aa23.68■■□□□ 1.38
SSRP1-203ENST00000526696 ZMYM4Q5VZL5 1548 aa23.68■■□□□ 1.38
SSRP1-203ENST00000526696 ZFYVE16Q7Z3T8 1539 aa23.66■■□□□ 1.38
SSRP1-203ENST00000526696 RAPGEF6Q8TEU7 1601 aa23.62■■□□□ 1.37
SSRP1-203ENST00000526696 CEBPAP49715 358 aaPredicted RBP23.62■■□□□ 1.37
SSRP1-203ENST00000526696 EFCAB5A4FU69 1503 aa23.62■■□□□ 1.37
SSRP1-203ENST00000526696 ARHGEF12Q9NZN5 1544 aa23.61■■□□□ 1.37
SSRP1-203ENST00000526696 DMRT2Q9Y5R5 561 aa23.61■■□□□ 1.37
SSRP1-203ENST00000526696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.59■■□□□ 1.37
SSRP1-203ENST00000526696 HNRNPUL2Q1KMD3 747 aaKnown RBP23.59■■□□□ 1.37
SSRP1-203ENST00000526696 PRXQ9BXM0 1461 aa23.59■■□□□ 1.37
SSRP1-203ENST00000526696 HECW1Q76N89 1606 aa23.59■■□□□ 1.37
SSRP1-203ENST00000526696 NUP153P49790 1475 aaKnown RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms