RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 DDX10Q13206 875 aaKnown RBP10.11□□□□□ -0.79
LRRK1-205ENST00000526457 PNNQ9H307 717 aaKnown RBP10.1□□□□□ -0.79
LRRK1-205ENST00000526457 MYH16Q9H6N6 1097 aa10.1□□□□□ -0.79
LRRK1-205ENST00000526457 TPRNQ4KMQ1 711 aa10.09□□□□□ -0.79
LRRK1-205ENST00000526457 VSIG10Q8N0Z9 540 aa10.09□□□□□ -0.79
LRRK1-205ENST00000526457 NRDCO43847 1150 aa10.09□□□□□ -0.79
LRRK1-205ENST00000526457 HSP90AA2PQ14568 343 aaPredicted RBP10.09□□□□□ -0.79
LRRK1-205ENST00000526457 CSRNP3Q8WYN3 585 aa10.09□□□□□ -0.79
LRRK1-205ENST00000526457 MIER1Q8N108 512 aa10.08□□□□□ -0.8
LRRK1-205ENST00000526457 PLCB2Q00722 1185 aa10.07□□□□□ -0.8
LRRK1-205ENST00000526457 PTMSP20962 102 aa10.07□□□□□ -0.8
LRRK1-205ENST00000526457 MYO15BQ96JP2 1530 aa10.06□□□□□ -0.8
LRRK1-205ENST00000526457 TMC1Q8TDI8 760 aa10.05□□□□□ -0.8
LRRK1-205ENST00000526457 A0A0U1RQG5 324 aaPredicted RBP10.04□□□□□ -0.8
LRRK1-205ENST00000526457 RSPH6AQ9H0K4 717 aa10.03□□□□□ -0.8
LRRK1-205ENST00000526457 MRS2Q9HD23 443 aa10.03□□□□□ -0.8
LRRK1-205ENST00000526457 TONSLQ96HA7 1378 aa10.03□□□□□ -0.8
LRRK1-205ENST00000526457 EEA1Q15075 1411 aa10.02□□□□□ -0.81
LRRK1-205ENST00000526457 PODXL2Q9NZ53 605 aa10.01□□□□□ -0.81
LRRK1-205ENST00000526457 HSP90AB1P08238 724 aaKnown RBP9.99□□□□□ -0.81
LRRK1-205ENST00000526457 WDR43Q15061 677 aaKnown RBP eCLIP9.99□□□□□ -0.81
LRRK1-205ENST00000526457 DRC7Q8IY82 874 aa9.99□□□□□ -0.81
LRRK1-205ENST00000526457 KIAA2012Q0VF49 1180 aa9.98□□□□□ -0.81
LRRK1-205ENST00000526457 CASC1Q6TDU7 716 aa9.98□□□□□ -0.81
LRRK1-205ENST00000526457 SUPT16HQ9Y5B9 1047 aaKnown RBP9.98□□□□□ -0.81
LRRK1-205ENST00000526457 ZBTB7CA1YPR0 619 aa9.97□□□□□ -0.81
LRRK1-205ENST00000526457 SETQ01105 290 aaPredicted RBP9.97□□□□□ -0.81
LRRK1-205ENST00000526457 SCRIBQ14160 1630 aa9.97□□□□□ -0.81
LRRK1-205ENST00000526457 PKNOX2Q96KN3 472 aa9.97□□□□□ -0.81
LRRK1-205ENST00000526457 PPP4R2Q9NY27 417 aa9.96□□□□□ -0.81
LRRK1-205ENST00000526457 GOLGA6L1Q8N7Z2 621 aa9.95□□□□□ -0.82
LRRK1-205ENST00000526457 APPP05067 770 aa9.94□□□□□ -0.82
LRRK1-205ENST00000526457 RBM19Q9Y4C8 960 aaKnown RBP9.94□□□□□ -0.82
LRRK1-205ENST00000526457 HSCBQ8IWL3 235 aa9.92□□□□□ -0.82
LRRK1-205ENST00000526457 NOC3LQ8WTT2 800 aaKnown RBP9.92□□□□□ -0.82
LRRK1-205ENST00000526457 PRKCSHP14314 528 aaPredicted RBP9.92□□□□□ -0.82
LRRK1-205ENST00000526457 RGS3P49796 1198 aa9.92□□□□□ -0.82
LRRK1-205ENST00000526457 TULP1O00294 542 aaPredicted RBP9.91□□□□□ -0.82
LRRK1-205ENST00000526457 TIMELESSQ9UNS1 1208 aa9.9□□□□□ -0.82
LRRK1-205ENST00000526457 GOLGA6L4A6NEF3 574 aa9.9□□□□□ -0.83
LRRK1-205ENST00000526457 ZNF771Q7L3S4 317 aaPredicted RBP9.89□□□□□ -0.83
LRRK1-205ENST00000526457 GZF1Q9H116 711 aaPredicted RBP9.89□□□□□ -0.83
LRRK1-205ENST00000526457 B4GALNT3Q6L9W6 998 aa9.87□□□□□ -0.83
LRRK1-205ENST00000526457 FTSJ3Q8IY81 847 aaKnown RBP9.87□□□□□ -0.83
LRRK1-205ENST00000526457 GOLGA6L3A6NEY3 463 aa9.86□□□□□ -0.83
LRRK1-205ENST00000526457 SPRYD3Q8NCJ5 442 aa9.86□□□□□ -0.83
LRRK1-205ENST00000526457 GBP4Q96PP9 640 aa9.86□□□□□ -0.83
LRRK1-205ENST00000526457 RB1CC1Q8TDY2 1594 aa9.85□□□□□ -0.83
LRRK1-205ENST00000526457 NACADO15069 1562 aa9.85□□□□□ -0.83
LRRK1-205ENST00000526457 USP35Q9P2H5 1018 aa9.84□□□□□ -0.83
LRRK1-205ENST00000526457 ABCC9O60706 1549 aa9.83□□□□□ -0.84
LRRK1-205ENST00000526457 GOLGA3Q08378 1498 aa9.82□□□□□ -0.84
LRRK1-205ENST00000526457 PABPN1Q86U42 306 aaKnown RBP eCLIP9.82□□□□□ -0.84
LRRK1-205ENST00000526457 FGD1P98174 961 aa9.82□□□□□ -0.84
LRRK1-205ENST00000526457 TAOK2Q9UL54 1235 aa9.81□□□□□ -0.84
LRRK1-205ENST00000526457 SYAP1Q96A49 352 aaPredicted RBP9.8□□□□□ -0.84
LRRK1-205ENST00000526457 HIRIP3Q9BW71 556 aaPredicted RBP9.78□□□□□ -0.84
LRRK1-205ENST00000526457 SLKQ9H2G2 1235 aaPredicted RBP9.78□□□□□ -0.84
LRRK1-205ENST00000526457 ARID3CA6NKF2 412 aa9.78□□□□□ -0.84
LRRK1-205ENST00000526457 SENP3-EIF4A1A0A087X0R7 540 aa9.78□□□□□ -0.84
LRRK1-205ENST00000526457 PATL2C9JE40 543 aaKnown RBP9.78□□□□□ -0.84
LRRK1-205ENST00000526457 HAP1P54257 671 aaPredicted RBP9.78□□□□□ -0.84
LRRK1-205ENST00000526457 NAP1L2Q9ULW6 460 aaPredicted RBP9.78□□□□□ -0.84
LRRK1-205ENST00000526457 TSHZ2Q9NRE2 1034 aa9.77□□□□□ -0.84
LRRK1-205ENST00000526457 KCNJ4P48050 445 aa9.77□□□□□ -0.85
LRRK1-205ENST00000526457 RSF1Q96T23 1441 aaPredicted RBP9.76□□□□□ -0.85
LRRK1-205ENST00000526457 NOM1Q5C9Z4 860 aaKnown RBP9.76□□□□□ -0.85
LRRK1-205ENST00000526457 FAM13BQ9NYF5 915 aa9.76□□□□□ -0.85
LRRK1-205ENST00000526457 NCBP3Q53F19 620 aaKnown RBP9.76□□□□□ -0.85
LRRK1-205ENST00000526457 CLIP1P30622 1438 aa9.76□□□□□ -0.85
LRRK1-205ENST00000526457 HTATSF1O43719 755 aaKnown RBP9.76□□□□□ -0.85
LRRK1-205ENST00000526457 TEX35Q5T0J7 233 aa9.75□□□□□ -0.85
LRRK1-205ENST00000526457 IPO9Q96P70 1041 aaKnown RBP9.75□□□□□ -0.85
LRRK1-205ENST00000526457 CEP164Q9UPV0 1460 aa9.75□□□□□ -0.85
LRRK1-205ENST00000526457 MCCP23508 829 aa9.73□□□□□ -0.85
LRRK1-205ENST00000526457 FBLN2P98095 1184 aa9.73□□□□□ -0.85
LRRK1-205ENST00000526457 TAF7LQ5H9L4 462 aa9.73□□□□□ -0.85
LRRK1-205ENST00000526457 CLSTN1O94985 981 aa9.73□□□□□ -0.85
LRRK1-205ENST00000526457 GPS2Q13227 327 aa9.72□□□□□ -0.85
LRRK1-205ENST00000526457 EIF4G2P78344 907 aaKnown RBP eCLIP9.72□□□□□ -0.85
LRRK1-205ENST00000526457 BAZ1AQ9NRL2 1556 aaPredicted RBP9.72□□□□□ -0.85
LRRK1-205ENST00000526457 PHF14O94880 888 aa9.72□□□□□ -0.85
LRRK1-205ENST00000526457 TPM4P67936 248 aa9.71□□□□□ -0.85
LRRK1-205ENST00000526457 RRP12Q5JTH9 1297 aaKnown RBP9.71□□□□□ -0.86
LRRK1-205ENST00000526457 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.7□□□□□ -0.86
LRRK1-205ENST00000526457 CEP162Q5TB80 1403 aa9.7□□□□□ -0.86
LRRK1-205ENST00000526457 FRAT1Q92837 279 aaPredicted RBP9.7□□□□□ -0.86
LRRK1-205ENST00000526457 CHMP4BQ9H444 224 aaKnown RBP9.7□□□□□ -0.86
LRRK1-205ENST00000526457 CALD1Q05682 793 aaKnown RBP9.69□□□□□ -0.86
LRRK1-205ENST00000526457 ANO8Q9HCE9 1232 aaPredicted RBP9.69□□□□□ -0.86
LRRK1-205ENST00000526457 ZNF777Q9ULD5 760 aaPredicted RBP9.69□□□□□ -0.86
LRRK1-205ENST00000526457 GNL2Q13823 731 aaKnown RBP9.69□□□□□ -0.86
LRRK1-205ENST00000526457 CCAR2Q8N163 923 aaKnown RBP9.69□□□□□ -0.86
LRRK1-205ENST00000526457 P3H3Q8IVL6 736 aa9.69□□□□□ -0.86
LRRK1-205ENST00000526457 CHGAP10645 457 aaKnown RBP9.68□□□□□ -0.86
LRRK1-205ENST00000526457 GSE1Q14687 1217 aa9.68□□□□□ -0.86
LRRK1-205ENST00000526457 MS4A1P11836 297 aa9.68□□□□□ -0.86
LRRK1-205ENST00000526457 TPM3P06753 285 aa9.67□□□□□ -0.86
LRRK1-205ENST00000526457 MAP7D2Q96T17 732 aa9.67□□□□□ -0.86
LRRK1-205ENST00000526457 KDM2AQ9Y2K7 1162 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms