RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 FHAD1B1AJZ9 1412 aa19.88■□□□□ 0.77
NEDD8-204ENST00000526430 PRG4Q92954 1404 aaPredicted RBP19.85■□□□□ 0.77
NEDD8-204ENST00000526430 ADCY10Q96PN6 1610 aa19.84■□□□□ 0.77
NEDD8-204ENST00000526430 ERICH3Q5RHP9 1530 aa19.83■□□□□ 0.77
NEDD8-204ENST00000526430 RUSC2Q8N2Y8 1516 aa19.79■□□□□ 0.76
NEDD8-204ENST00000526430 WRNQ14191 1432 aaPredicted RBP eCLIP19.78■□□□□ 0.76
NEDD8-204ENST00000526430 BIVM-ERCC5R4GMW8 1640 aa19.77■□□□□ 0.76
NEDD8-204ENST00000526430 NPM1P06748 294 aaKnown RBP eCLIP19.77■□□□□ 0.76
NEDD8-204ENST00000526430 JPH4Q96JJ6 628 aa19.74■□□□□ 0.75
NEDD8-204ENST00000526430 HECW2Q9P2P5 1572 aa19.73■□□□□ 0.75
NEDD8-204ENST00000526430 ADGRL1O94910 1474 aa19.73■□□□□ 0.75
NEDD8-204ENST00000526430 TOP2BQ02880 1626 aa19.72■□□□□ 0.75
NEDD8-204ENST00000526430 PPRC1Q5VV67 1664 aaKnown RBP19.7■□□□□ 0.74
NEDD8-204ENST00000526430 GLI2P10070 1586 aa19.61■□□□□ 0.73
NEDD8-204ENST00000526430 KIAA0586Q9BVV6 1533 aa19.54■□□□□ 0.72
NEDD8-204ENST00000526430 SUPT5HO00267 1087 aaKnown RBP19.52■□□□□ 0.72
NEDD8-204ENST00000526430 ABCC2Q92887 1545 aa19.51■□□□□ 0.71
NEDD8-204ENST00000526430 MAP3K4Q9Y6R4 1608 aa19.51■□□□□ 0.71
NEDD8-204ENST00000526430 PLB1Q6P1J6 1458 aa19.51■□□□□ 0.71
NEDD8-204ENST00000526430 CUL7Q14999 1698 aa19.5■□□□□ 0.71
NEDD8-204ENST00000526430 FBXO41Q8TF61 875 aa19.48■□□□□ 0.71
NEDD8-204ENST00000526430 ASXL2Q76L83 1435 aa19.48■□□□□ 0.71
NEDD8-204ENST00000526430 COL17A1Q9UMD9 1497 aaPredicted RBP19.48■□□□□ 0.71
NEDD8-204ENST00000526430 PTPRGP23470 1445 aa19.43■□□□□ 0.7
NEDD8-204ENST00000526430 TEX14Q8IWB6 1497 aa19.43■□□□□ 0.7
NEDD8-204ENST00000526430 UHRF1BP1LA0JNW5 1464 aa19.41■□□□□ 0.7
NEDD8-204ENST00000526430 EPRSP07814 1512 aaKnown RBP19.38■□□□□ 0.69
NEDD8-204ENST00000526430 TNIKQ9UKE5 1360 aa19.36■□□□□ 0.69
NEDD8-204ENST00000526430 CARMIL2Q6F5E8 1435 aa19.34■□□□□ 0.69
NEDD8-204ENST00000526430 KDM5BQ9UGL1 1544 aa19.32■□□□□ 0.68
NEDD8-204ENST00000526430 ZCCHC11Q5TAX3 1644 aaKnown RBP19.32■□□□□ 0.68
NEDD8-204ENST00000526430 UACAQ9BZF9 1416 aa19.3■□□□□ 0.68
NEDD8-204ENST00000526430 IQGAP2Q13576 1575 aa19.28■□□□□ 0.68
NEDD8-204ENST00000526430 KIF21BO75037 1637 aa19.28■□□□□ 0.68
NEDD8-204ENST00000526430 IGF1RP08069 1367 aa19.28■□□□□ 0.68
NEDD8-204ENST00000526430 CFAP43Q8NDM7 1665 aa19.27■□□□□ 0.67
NEDD8-204ENST00000526430 KIF27Q86VH2 1401 aa19.22■□□□□ 0.67
NEDD8-204ENST00000526430 DISP1Q96F81 1524 aa19.21■□□□□ 0.67
NEDD8-204ENST00000526430 MAGI3Q5TCQ9 1506 aa19.2■□□□□ 0.66
NEDD8-204ENST00000526430 WDR7Q9Y4E6 1490 aa19.2■□□□□ 0.66
NEDD8-204ENST00000526430 TTBK1Q5TCY1 1321 aaPredicted RBP19.2■□□□□ 0.66
NEDD8-204ENST00000526430 LMTK3Q96Q04 1460 aa19.19■□□□□ 0.66
NEDD8-204ENST00000526430 ADAMTSL3P82987 1691 aa19.19■□□□□ 0.66
NEDD8-204ENST00000526430 PTPRMP28827 1452 aa19.14■□□□□ 0.65
NEDD8-204ENST00000526430 CARMIL1Q5VZK9 1371 aa19.13■□□□□ 0.65
NEDD8-204ENST00000526430 UGGT2Q9NYU1 1516 aa19.13■□□□□ 0.65
NEDD8-204ENST00000526430 PCF11O94913 1555 aaKnown RBP19.13■□□□□ 0.65
NEDD8-204ENST00000526430 KIAA0556O60303 1618 aa19.12■□□□□ 0.65
NEDD8-204ENST00000526430 CD109Q6YHK3 1445 aa19.11■□□□□ 0.65
NEDD8-204ENST00000526430 ARAP3Q8WWN8 1544 aa19.1■□□□□ 0.65
NEDD8-204ENST00000526430 BCORL1Q5H9F3 1711 aa19.08■□□□□ 0.64
NEDD8-204ENST00000526430 MADDQ8WXG6 1647 aa19.03■□□□□ 0.64
NEDD8-204ENST00000526430 SOCS7O14512 581 aa19■□□□□ 0.63
NEDD8-204ENST00000526430 ABCA8O94911 1581 aa18.99■□□□□ 0.63
NEDD8-204ENST00000526430 CTTNBP2Q8WZ74 1663 aa18.98■□□□□ 0.63
NEDD8-204ENST00000526430 RIMS1Q86UR5 1692 aaKnown RBP18.95■□□□□ 0.62
NEDD8-204ENST00000526430 PHLDB1Q86UU1 1377 aa18.95■□□□□ 0.62
NEDD8-204ENST00000526430 ABCA9Q8IUA7 1624 aa18.94■□□□□ 0.62
NEDD8-204ENST00000526430 ILDR2Q71H61 639 aa18.92■□□□□ 0.62
NEDD8-204ENST00000526430 RAPGEF2Q9Y4G8 1499 aa18.91■□□□□ 0.62
NEDD8-204ENST00000526430 KCNH8Q96L42 1107 aa18.91■□□□□ 0.62
NEDD8-204ENST00000526430 FRMPD1Q5SYB0 1578 aa18.9■□□□□ 0.62
NEDD8-204ENST00000526430 CERKQ8TCT0 537 aa18.9■□□□□ 0.62
NEDD8-204ENST00000526430 DISP3Q9P2K9 1392 aa18.9■□□□□ 0.62
NEDD8-204ENST00000526430 GOLGA3Q08378 1498 aa18.88■□□□□ 0.61
NEDD8-204ENST00000526430 ARHGEF40Q8TER5 1519 aa18.86■□□□□ 0.61
NEDD8-204ENST00000526430 NEO1Q92859 1461 aa18.86■□□□□ 0.61
NEDD8-204ENST00000526430 SPATA31D1Q6ZQQ2 1576 aa18.85■□□□□ 0.61
NEDD8-204ENST00000526430 RICTORQ6R327 1708 aa18.82■□□□□ 0.6
NEDD8-204ENST00000526430 RAPGEF3O95398 923 aa18.79■□□□□ 0.6
NEDD8-204ENST00000526430 HSPA2P54652 639 aa18.79■□□□□ 0.6
NEDD8-204ENST00000526430 FER1L4A9Z1Z3 1794 aa18.78■□□□□ 0.6
NEDD8-204ENST00000526430 ARID4BQ4LE39 1312 aaPredicted RBP18.78■□□□□ 0.6
NEDD8-204ENST00000526430 PREX1Q8TCU6 1659 aa18.77■□□□□ 0.6
NEDD8-204ENST00000526430 TTC37Q6PGP7 1564 aa18.76■□□□□ 0.59
NEDD8-204ENST00000526430 ATP10BO94823 1461 aa18.75■□□□□ 0.59
NEDD8-204ENST00000526430 SIGLEC1Q9BZZ2 1709 aa18.74■□□□□ 0.59
NEDD8-204ENST00000526430 FANCAO15360 1455 aa18.74■□□□□ 0.59
NEDD8-204ENST00000526430 STRCQ7RTU9 1775 aa18.73■□□□□ 0.59
NEDD8-204ENST00000526430 POGZQ7Z3K3 1410 aa18.73■□□□□ 0.59
NEDD8-204ENST00000526430 ZMYM4Q5VZL5 1548 aa18.71■□□□□ 0.59
NEDD8-204ENST00000526430 CFAP74Q9C0B2 1584 aa18.71■□□□□ 0.59
NEDD8-204ENST00000526430 EFCAB5A4FU69 1503 aa18.68■□□□□ 0.58
NEDD8-204ENST00000526430 FHOD3Q2V2M9 1422 aa18.67■□□□□ 0.58
NEDD8-204ENST00000526430 DENND4BO75064 1496 aaPredicted RBP18.67■□□□□ 0.58
NEDD8-204ENST00000526430 SETD1BQ9UPS6 1966 aaKnown RBP18.67■□□□□ 0.58
NEDD8-204ENST00000526430 AKNAQ7Z591 1439 aa18.66■□□□□ 0.58
NEDD8-204ENST00000526430 RAPGEF6Q8TEU7 1601 aa18.65■□□□□ 0.58
NEDD8-204ENST00000526430 YEATS2Q9ULM3 1422 aa18.65■□□□□ 0.58
NEDD8-204ENST00000526430 ZFYVE16Q7Z3T8 1539 aa18.64■□□□□ 0.58
NEDD8-204ENST00000526430 MAGI2Q86UL8 1455 aa18.63■□□□□ 0.57
NEDD8-204ENST00000526430 FAM9AQ8IZU1 332 aaPredicted RBP18.61■□□□□ 0.57
NEDD8-204ENST00000526430 DMRT2Q9Y5R5 561 aa18.61■□□□□ 0.57
NEDD8-204ENST00000526430 ARHGEF12Q9NZN5 1544 aa18.6■□□□□ 0.57
NEDD8-204ENST00000526430 IQSEC2Q5JU85 1478 aa18.59■□□□□ 0.57
NEDD8-204ENST00000526430 SAMD9Q5K651 1589 aa18.59■□□□□ 0.57
NEDD8-204ENST00000526430 ARID3CA6NKF2 412 aa18.57■□□□□ 0.56
NEDD8-204ENST00000526430 PLPPR3Q6T4P5 718 aa18.56■□□□□ 0.56
NEDD8-204ENST00000526430 HECW1Q76N89 1606 aa18.56■□□□□ 0.56
NEDD8-204ENST00000526430 PRXQ9BXM0 1461 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms