RNA–Protein interactions for RNA: ENST00000526258.5

KDM2A-207, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 5,671 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-207ENST00000526258 L1TD1Q5T7N2 865 aaKnown RBP17.18■□□□□ 0.34
KDM2A-207ENST00000526258 PNNQ9H307 717 aaKnown RBP17.16■□□□□ 0.34
KDM2A-207ENST00000526258 TONSLQ96HA7 1378 aa17.15■□□□□ 0.34
KDM2A-207ENST00000526258 TMC1Q8TDI8 760 aa17.13■□□□□ 0.33
KDM2A-207ENST00000526258 RSPH6AQ9H0K4 717 aa17.13■□□□□ 0.33
KDM2A-207ENST00000526258 HSP90AA2PQ14568 343 aaPredicted RBP17.12■□□□□ 0.33
KDM2A-207ENST00000526258 CCDC180Q9P1Z9 1646 aa17.07■□□□□ 0.32
KDM2A-207ENST00000526258 MSNP26038 577 aaKnown RBP17.07■□□□□ 0.32
KDM2A-207ENST00000526258 B4GALNT3Q6L9W6 998 aa17.05■□□□□ 0.32
KDM2A-207ENST00000526258 PKNOX2Q96KN3 472 aa17.05■□□□□ 0.32
KDM2A-207ENST00000526258 ARID3AQ99856 593 aa16.99■□□□□ 0.31
KDM2A-207ENST00000526258 HIRIP3Q9BW71 556 aaPredicted RBP16.98■□□□□ 0.31
KDM2A-207ENST00000526258 PODXL2Q9NZ53 605 aa16.97■□□□□ 0.31
KDM2A-207ENST00000526258 TPRNQ4KMQ1 711 aa16.97■□□□□ 0.31
KDM2A-207ENST00000526258 TNNT3P45378 269 aaPredicted RBP16.96■□□□□ 0.31
KDM2A-207ENST00000526258 ANO8Q9HCE9 1232 aaPredicted RBP16.96■□□□□ 0.31
KDM2A-207ENST00000526258 CHAF1AQ13111 956 aaPredicted RBP16.96■□□□□ 0.3
KDM2A-207ENST00000526258 PLCB2Q00722 1185 aa16.95■□□□□ 0.3
KDM2A-207ENST00000526258 WDR43Q15061 677 aaKnown RBP eCLIP16.94■□□□□ 0.3
KDM2A-207ENST00000526258 MYH16Q9H6N6 1097 aa16.94■□□□□ 0.3
KDM2A-207ENST00000526258 ZRSR1Q15695 479 aaKnown RBP16.93■□□□□ 0.3
KDM2A-207ENST00000526258 TIMELESSQ9UNS1 1208 aa16.92■□□□□ 0.3
KDM2A-207ENST00000526258 IPO9Q96P70 1041 aaKnown RBP16.91■□□□□ 0.3
KDM2A-207ENST00000526258 A0A0U1RQG5 324 aaPredicted RBP16.91■□□□□ 0.3
KDM2A-207ENST00000526258 USP35Q9P2H5 1018 aa16.87■□□□□ 0.29
KDM2A-207ENST00000526258 RGS3P49796 1198 aa16.86■□□□□ 0.29
KDM2A-207ENST00000526258 MYO15BQ96JP2 1530 aa16.85■□□□□ 0.29
KDM2A-207ENST00000526258 GOLGA6L3A6NEY3 463 aa16.81■□□□□ 0.28
KDM2A-207ENST00000526258 EIF4G2P78344 907 aaKnown RBP eCLIP16.79■□□□□ 0.28
KDM2A-207ENST00000526258 FANCIQ9NVI1 1328 aa16.78■□□□□ 0.28
KDM2A-207ENST00000526258 HSP90AB1P08238 724 aaKnown RBP16.78■□□□□ 0.28
KDM2A-207ENST00000526258 P3H3Q8IVL6 736 aa16.78■□□□□ 0.28
KDM2A-207ENST00000526258 GZF1Q9H116 711 aaPredicted RBP16.78■□□□□ 0.28
KDM2A-207ENST00000526258 SENP3-EIF4A1A0A087X0R7 540 aa16.78■□□□□ 0.28
KDM2A-207ENST00000526258 ARID3CA6NKF2 412 aa16.78■□□□□ 0.28
KDM2A-207ENST00000526258 GOLGA6L6A8MZA4 724 aa16.77■□□□□ 0.28
KDM2A-207ENST00000526258 GSE1Q14687 1217 aa16.77■□□□□ 0.28
KDM2A-207ENST00000526258 ZNF777Q9ULD5 760 aaPredicted RBP16.76■□□□□ 0.27
KDM2A-207ENST00000526258 NRDCO43847 1150 aa16.75■□□□□ 0.27
KDM2A-207ENST00000526258 ZBTB7CA1YPR0 619 aa16.74■□□□□ 0.27
KDM2A-207ENST00000526258 KIAA2012Q0VF49 1180 aa16.73■□□□□ 0.27
KDM2A-207ENST00000526258 HSCBQ8IWL3 235 aa16.73■□□□□ 0.27
KDM2A-207ENST00000526258 CCER2I3L3R5 266 aa16.72■□□□□ 0.27
KDM2A-207ENST00000526258 TCERG1O14776 1098 aaKnown RBP16.72■□□□□ 0.27
KDM2A-207ENST00000526258 CASC1Q6TDU7 716 aa16.71■□□□□ 0.27
KDM2A-207ENST00000526258 SPRYD3Q8NCJ5 442 aa16.69■□□□□ 0.26
KDM2A-207ENST00000526258 CHGAP10645 457 aaKnown RBP16.68■□□□□ 0.26
KDM2A-207ENST00000526258 SLKQ9H2G2 1235 aaPredicted RBP16.68■□□□□ 0.26
KDM2A-207ENST00000526258 PTMSP20962 102 aa16.67■□□□□ 0.26
KDM2A-207ENST00000526258 GBP4Q96PP9 640 aa16.66■□□□□ 0.26
KDM2A-207ENST00000526258 DRC7Q8IY82 874 aa16.64■□□□□ 0.25
KDM2A-207ENST00000526258 TULP1O00294 542 aaPredicted RBP16.63■□□□□ 0.25
KDM2A-207ENST00000526258 FTSJ3Q8IY81 847 aaKnown RBP16.61■□□□□ 0.25
KDM2A-207ENST00000526258 KDM2AQ9Y2K7 1162 aa16.61■□□□□ 0.25
KDM2A-207ENST00000526258 GOLGA6L4A6NEF3 574 aa16.59■□□□□ 0.25
KDM2A-207ENST00000526258 ZNF771Q7L3S4 317 aaPredicted RBP16.58■□□□□ 0.24
KDM2A-207ENST00000526258 IL27Q8NEV9 243 aa16.58■□□□□ 0.24
KDM2A-207ENST00000526258 FAM13BQ9NYF5 915 aa16.57■□□□□ 0.24
KDM2A-207ENST00000526258 TAOK2Q9UL54 1235 aa16.57■□□□□ 0.24
KDM2A-207ENST00000526258 CHIC2Q9UKJ5 165 aa16.55■□□□□ 0.24
KDM2A-207ENST00000526258 FBLN2P98095 1184 aa16.53■□□□□ 0.24
KDM2A-207ENST00000526258 UBE2Q2Q8WVN8 375 aa16.53■□□□□ 0.24
KDM2A-207ENST00000526258 STAG3Q9UJ98 1225 aa16.52■□□□□ 0.24
KDM2A-207ENST00000526258 APPP05067 770 aa16.52■□□□□ 0.23
KDM2A-207ENST00000526258 FRAT1Q92837 279 aaPredicted RBP16.52■□□□□ 0.23
KDM2A-207ENST00000526258 FGD1P98174 961 aa16.49■□□□□ 0.23
KDM2A-207ENST00000526258 MAP7D2Q96T17 732 aa16.48■□□□□ 0.23
KDM2A-207ENST00000526258 FAM43AQ8N2R8 423 aa16.47■□□□□ 0.23
KDM2A-207ENST00000526258 NEUROD2Q15784 382 aa16.46■□□□□ 0.23
KDM2A-207ENST00000526258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.46■□□□□ 0.234e-7■■■■□ 25
KDM2A-207ENST00000526258 SYAP1Q96A49 352 aaPredicted RBP16.45■□□□□ 0.22
KDM2A-207ENST00000526258 CALD1Q05682 793 aaKnown RBP16.45■□□□□ 0.22
KDM2A-207ENST00000526258 BRPF3Q9ULD4 1205 aa16.45■□□□□ 0.22
KDM2A-207ENST00000526258 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.45■□□□□ 0.22
KDM2A-207ENST00000526258 NAP1L2Q9ULW6 460 aaPredicted RBP16.44■□□□□ 0.22
KDM2A-207ENST00000526258 DDX11L8A8MPP1 907 aa16.43■□□□□ 0.22
KDM2A-207ENST00000526258 GOLGA6L1Q8N7Z2 621 aa16.43■□□□□ 0.22
KDM2A-207ENST00000526258 KCNJ4P48050 445 aa16.43■□□□□ 0.22
KDM2A-207ENST00000526258 NOC3LQ8WTT2 800 aaKnown RBP16.43■□□□□ 0.22
KDM2A-207ENST00000526258 SETQ01105 290 aaPredicted RBP16.43■□□□□ 0.22
KDM2A-207ENST00000526258 MTERF4Q7Z6M4 381 aaKnown RBP16.43■□□□□ 0.22
KDM2A-207ENST00000526258 PDE4AP27815 886 aa16.43■□□□□ 0.22
KDM2A-207ENST00000526258 SLC4A3P48751 1232 aa16.43■□□□□ 0.22
KDM2A-207ENST00000526258 CALRP27797 417 aaKnown RBP16.42■□□□□ 0.22
KDM2A-207ENST00000526258 SIN3AQ96ST3 1273 aa16.42■□□□□ 0.22
KDM2A-207ENST00000526258 RCAN3Q9UKA8 241 aa16.41■□□□□ 0.22
KDM2A-207ENST00000526258 CFAP53Q96M91 514 aa16.4■□□□□ 0.22
KDM2A-207ENST00000526258 MS4A1P11836 297 aa16.4■□□□□ 0.22
KDM2A-207ENST00000526258 RRP9O43818 475 aaKnown RBP16.39■□□□□ 0.21
KDM2A-207ENST00000526258 TPM2P07951 284 aa16.39■□□□□ 0.21
KDM2A-207ENST00000526258 CEP162Q5TB80 1403 aa16.39■□□□□ 0.21
KDM2A-207ENST00000526258 ESF1Q9H501 851 aaKnown RBP16.39■□□□□ 0.21
KDM2A-207ENST00000526258 CLIP1P30622 1438 aa16.38■□□□□ 0.21
KDM2A-207ENST00000526258 CSPP1Q1MSJ5 1256 aa16.38■□□□□ 0.21
KDM2A-207ENST00000526258 KNSTRNQ9Y448 316 aa16.36■□□□□ 0.21
KDM2A-207ENST00000526258 CHMP4BQ9H444 224 aaKnown RBP16.36■□□□□ 0.21
KDM2A-207ENST00000526258 NUDCQ9Y266 331 aa16.36■□□□□ 0.21
KDM2A-207ENST00000526258 A0A0G2JS52 829 aa16.35■□□□□ 0.21
KDM2A-207ENST00000526258 MCCP23508 829 aa16.34■□□□□ 0.21
KDM2A-207ENST00000526258 NFKBIBQ15653 356 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms