RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 RUSC2Q8N2Y8 1516 aa29.55■■■□□ 2.32
CCS-204ENST00000526066 NPM1P06748 294 aaKnown RBP eCLIP29.53■■■□□ 2.32
CCS-204ENST00000526066 FAM69CQ0P6D2 419 aa29.4■■■□□ 2.3
CCS-204ENST00000526066 MAPKBP1O60336 1514 aa29.39■■■□□ 2.3
CCS-204ENST00000526066 CUL7Q14999 1698 aa29.38■■■□□ 2.29
CCS-204ENST00000526066 ABCC10Q5T3U5 1492 aa29.38■■■□□ 2.29
CCS-204ENST00000526066 KIF27Q86VH2 1401 aa29.37■■■□□ 2.29
CCS-204ENST00000526066 KIAA0586Q9BVV6 1533 aa29.36■■■□□ 2.29
CCS-204ENST00000526066 ADCY10Q96PN6 1610 aa29.34■■■□□ 2.29
CCS-204ENST00000526066 DIP2BQ9P265 1576 aa29.31■■■□□ 2.28
CCS-204ENST00000526066 IGF1RP08069 1367 aa29.27■■■□□ 2.28
CCS-204ENST00000526066 KDM6BO15054 1643 aa29.2■■■□□ 2.27
CCS-204ENST00000526066 TSPOAP1O95153 1857 aa29.18■■■□□ 2.26
CCS-204ENST00000526066 PTPRGP23470 1445 aa29.17■■■□□ 2.26
CCS-204ENST00000526066 CARMIL2Q6F5E8 1435 aa29.17■■■□□ 2.26
CCS-204ENST00000526066 TTBK1Q5TCY1 1321 aaPredicted RBP29.15■■■□□ 2.26
CCS-204ENST00000526066 CARMIL1Q5VZK9 1371 aa29.13■■■□□ 2.25
CCS-204ENST00000526066 CHIC1Q5VXU3 224 aa29.11■■■□□ 2.25
CCS-204ENST00000526066 TNIKQ9UKE5 1360 aa29.09■■■□□ 2.25
CCS-204ENST00000526066 IQGAP2Q13576 1575 aa29.08■■■□□ 2.25
CCS-204ENST00000526066 ABCC2Q92887 1545 aa29.04■■■□□ 2.24
CCS-204ENST00000526066 PLB1Q6P1J6 1458 aa29■■■□□ 2.23
CCS-204ENST00000526066 ASXL2Q76L83 1435 aa28.97■■■□□ 2.23
CCS-204ENST00000526066 KDM4FA0A1W2PPD8 638 aa28.97■■■□□ 2.23
CCS-204ENST00000526066 UHRF1BP1LA0JNW5 1464 aa28.94■■■□□ 2.22
CCS-204ENST00000526066 UACAQ9BZF9 1416 aa28.93■■■□□ 2.22
CCS-204ENST00000526066 GLI2P10070 1586 aa28.92■■■□□ 2.22
CCS-204ENST00000526066 DISP1Q96F81 1524 aa28.87■■■□□ 2.21
CCS-204ENST00000526066 RAPGEF2Q9Y4G8 1499 aa28.86■■■□□ 2.21
CCS-204ENST00000526066 PPRC1Q5VV67 1664 aaKnown RBP28.84■■■□□ 2.21
CCS-204ENST00000526066 UGGT2Q9NYU1 1516 aa28.83■■■□□ 2.21
CCS-204ENST00000526066 KDM5BQ9UGL1 1544 aa28.8■■■□□ 2.2
CCS-204ENST00000526066 KIAA0556O60303 1618 aa28.8■■■□□ 2.2
CCS-204ENST00000526066 TEX14Q8IWB6 1497 aa28.79■■■□□ 2.2
CCS-204ENST00000526066 ZCCHC11Q5TAX3 1644 aaKnown RBP28.78■■■□□ 2.2
CCS-204ENST00000526066 EPRSP07814 1512 aaKnown RBP28.78■■■□□ 2.2
CCS-204ENST00000526066 MAP3K4Q9Y6R4 1608 aa28.76■■■□□ 2.2
CCS-204ENST00000526066 ILDR1Q86SU0 546 aaPredicted RBP28.71■■■□□ 2.19
CCS-204ENST00000526066 ADGRL1O94910 1474 aa28.71■■■□□ 2.19
CCS-204ENST00000526066 CTTNBP2Q8WZ74 1663 aa28.7■■■□□ 2.19
CCS-204ENST00000526066 GOLGA3Q08378 1498 aa28.66■■■□□ 2.18
CCS-204ENST00000526066 WDR7Q9Y4E6 1490 aa28.66■■■□□ 2.18
CCS-204ENST00000526066 COL17A1Q9UMD9 1497 aaPredicted RBP28.61■■■□□ 2.17
CCS-204ENST00000526066 FAM9AQ8IZU1 332 aaPredicted RBP28.58■■■□□ 2.17
CCS-204ENST00000526066 EEA1Q15075 1411 aa28.58■■■□□ 2.17
CCS-204ENST00000526066 CFAP43Q8NDM7 1665 aa28.55■■■□□ 2.16
CCS-204ENST00000526066 CD109Q6YHK3 1445 aa28.52■■■□□ 2.16
CCS-204ENST00000526066 ABCA8O94911 1581 aa28.51■■■□□ 2.15
CCS-204ENST00000526066 KCNH8Q96L42 1107 aa28.51■■■□□ 2.15
CCS-204ENST00000526066 MAGI3Q5TCQ9 1506 aa28.49■■■□□ 2.15
CCS-204ENST00000526066 PRXQ9BXM0 1461 aa28.42■■■□□ 2.14
CCS-204ENST00000526066 CSRNP3Q8WYN3 585 aa28.41■■■□□ 2.14
CCS-204ENST00000526066 HECW2Q9P2P5 1572 aa28.41■■■□□ 2.14
CCS-204ENST00000526066 ARID3CA6NKF2 412 aa28.32■■■□□ 2.12
CCS-204ENST00000526066 KIF21BO75037 1637 aa28.3■■■□□ 2.12
CCS-204ENST00000526066 P3H3Q8IVL6 736 aa28.3■■■□□ 2.12
CCS-204ENST00000526066 ARAP3Q8WWN8 1544 aa28.28■■■□□ 2.12
CCS-204ENST00000526066 ATP10BO94823 1461 aa28.26■■■□□ 2.11
CCS-204ENST00000526066 PHLDB1Q86UU1 1377 aa28.24■■■□□ 2.11
CCS-204ENST00000526066 ABCA9Q8IUA7 1624 aa28.23■■■□□ 2.11
CCS-204ENST00000526066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.22■■■□□ 2.11
CCS-204ENST00000526066 HNRNPUL2Q1KMD3 747 aaKnown RBP28.22■■■□□ 2.11
CCS-204ENST00000526066 RAPGEF6Q8TEU7 1601 aa28.21■■■□□ 2.11
CCS-204ENST00000526066 SAMD9Q5K651 1589 aa28.2■■■□□ 2.11
CCS-204ENST00000526066 NEO1Q92859 1461 aa28.15■■■□□ 2.1
CCS-204ENST00000526066 RAPGEF3O95398 923 aa28.08■■■□□ 2.09
CCS-204ENST00000526066 RANGAP1P46060 587 aaPredicted RBP28.07■■■□□ 2.08
CCS-204ENST00000526066 ARID4BQ4LE39 1312 aaPredicted RBP28.06■■■□□ 2.08
CCS-204ENST00000526066 ADAMTSL3P82987 1691 aa28.04■■■□□ 2.08
CCS-204ENST00000526066 PTPRMP28827 1452 aa28.04■■■□□ 2.08
CCS-204ENST00000526066 NUP153P49790 1475 aaKnown RBP28.03■■■□□ 2.08
CCS-204ENST00000526066 FBXO41Q8TF61 875 aa28.03■■■□□ 2.08
CCS-204ENST00000526066 PLEKHD1A6NEE1 506 aa28.01■■■□□ 2.07
CCS-204ENST00000526066 FHOD3Q2V2M9 1422 aa28■■■□□ 2.07
CCS-204ENST00000526066 FRMPD1Q5SYB0 1578 aa27.99■■■□□ 2.07
CCS-204ENST00000526066 CFAP74Q9C0B2 1584 aa27.99■■■□□ 2.07
CCS-204ENST00000526066 BCORL1Q5H9F3 1711 aa27.98■■■□□ 2.07
CCS-204ENST00000526066 DENND4BO75064 1496 aaPredicted RBP27.95■■■□□ 2.06
CCS-204ENST00000526066 MADDQ8WXG6 1647 aa27.94■■■□□ 2.06
CCS-204ENST00000526066 ARHGEF40Q8TER5 1519 aa27.93■■■□□ 2.06
CCS-204ENST00000526066 EFCAB5A4FU69 1503 aa27.92■■■□□ 2.06
CCS-204ENST00000526066 FANCAO15360 1455 aa27.91■■■□□ 2.06
CCS-204ENST00000526066 UBTFP17480 764 aaKnown RBP27.91■■■□□ 2.06
CCS-204ENST00000526066 RICTORQ6R327 1708 aa27.89■■■□□ 2.06
CCS-204ENST00000526066 EHMT2Q96KQ7 1210 aa27.89■■■□□ 2.06
CCS-204ENST00000526066 AKNAQ7Z591 1439 aa27.89■■■□□ 2.06
CCS-204ENST00000526066 PCF11O94913 1555 aaKnown RBP27.87■■■□□ 2.05
CCS-204ENST00000526066 POGZQ7Z3K3 1410 aa27.86■■■□□ 2.05
CCS-204ENST00000526066 LOC105371045A0A1W2PR82 267 aa27.86■■■□□ 2.05
CCS-204ENST00000526066 RIMS1Q86UR5 1692 aaKnown RBP27.86■■■□□ 2.05
CCS-204ENST00000526066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.85■■■□□ 2.05
CCS-204ENST00000526066 TTC37Q6PGP7 1564 aa27.83■■■□□ 2.05
CCS-204ENST00000526066 ZMYM4Q5VZL5 1548 aa27.8■■■□□ 2.04
CCS-204ENST00000526066 ZFYVE16Q7Z3T8 1539 aa27.8■■■□□ 2.04
CCS-204ENST00000526066 LMTK3Q96Q04 1460 aa27.78■■■□□ 2.04
CCS-204ENST00000526066 MAGI2Q86UL8 1455 aa27.76■■■□□ 2.04
CCS-204ENST00000526066 CDK13Q14004 1512 aaKnown RBP27.76■■■□□ 2.03
CCS-204ENST00000526066 PLPPR3Q6T4P5 718 aa27.75■■■□□ 2.03
CCS-204ENST00000526066 ATP1B4Q9UN42 357 aaPredicted RBP27.73■■■□□ 2.03
CCS-204ENST00000526066 HECW1Q76N89 1606 aa27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms