RNA–Protein interactions for RNA: ENST00000525395.2

LRRK1-203, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-203ENST00000525395 RUSC2Q8N2Y8 1516 aa16.41■□□□□ 0.22
LRRK1-203ENST00000525395 CARMIL1Q5VZK9 1371 aa16.4■□□□□ 0.22
LRRK1-203ENST00000525395 KIAA0586Q9BVV6 1533 aa16.38■□□□□ 0.21
LRRK1-203ENST00000525395 CUL7Q14999 1698 aa16.37■□□□□ 0.21
LRRK1-203ENST00000525395 TTBK1Q5TCY1 1321 aaPredicted RBP16.27■□□□□ 0.2
LRRK1-203ENST00000525395 ADCY10Q96PN6 1610 aa16.23■□□□□ 0.19
LRRK1-203ENST00000525395 RAPGEF2Q9Y4G8 1499 aa16.23■□□□□ 0.19
LRRK1-203ENST00000525395 PTPRGP23470 1445 aa16.22■□□□□ 0.19
LRRK1-203ENST00000525395 NPM1P06748 294 aaKnown RBP eCLIP16.21■□□□□ 0.19
LRRK1-203ENST00000525395 IQGAP2Q13576 1575 aa16.2■□□□□ 0.18
LRRK1-203ENST00000525395 FAM69CQ0P6D2 419 aa16.19■□□□□ 0.18
LRRK1-203ENST00000525395 KIF13AQ9H1H9 1805 aa16.19■□□□□ 0.18
LRRK1-203ENST00000525395 DISP1Q96F81 1524 aa16.19■□□□□ 0.18
LRRK1-203ENST00000525395 TNIKQ9UKE5 1360 aa16.18■□□□□ 0.18
LRRK1-203ENST00000525395 CARMIL2Q6F5E8 1435 aa16.17■□□□□ 0.18
LRRK1-203ENST00000525395 ABCC10Q5T3U5 1492 aa16.16■□□□□ 0.18
LRRK1-203ENST00000525395 MAPKBP1O60336 1514 aa16.14■□□□□ 0.18
LRRK1-203ENST00000525395 PRXQ9BXM0 1461 aa16.13■□□□□ 0.17
LRRK1-203ENST00000525395 UGGT2Q9NYU1 1516 aa16.13■□□□□ 0.17
LRRK1-203ENST00000525395 DIP2BQ9P265 1576 aa16.1■□□□□ 0.17
LRRK1-203ENST00000525395 UACAQ9BZF9 1416 aa16.09■□□□□ 0.17
LRRK1-203ENST00000525395 ABCC2Q92887 1545 aa16.09■□□□□ 0.17
LRRK1-203ENST00000525395 CSRNP3Q8WYN3 585 aa16.07■□□□□ 0.16
LRRK1-203ENST00000525395 KIAA0556O60303 1618 aa16.06■□□□□ 0.16
LRRK1-203ENST00000525395 UHRF1BP1LA0JNW5 1464 aa16.06■□□□□ 0.16
LRRK1-203ENST00000525395 ASXL2Q76L83 1435 aa16.05■□□□□ 0.16
LRRK1-203ENST00000525395 CTTNBP2Q8WZ74 1663 aa16.03■□□□□ 0.16
LRRK1-203ENST00000525395 FAM9AQ8IZU1 332 aaPredicted RBP16.03■□□□□ 0.16
LRRK1-203ENST00000525395 PLB1Q6P1J6 1458 aa16.02■□□□□ 0.15
LRRK1-203ENST00000525395 KDM5BQ9UGL1 1544 aa16.01■□□□□ 0.15
LRRK1-203ENST00000525395 P3H3Q8IVL6 736 aa16.01■□□□□ 0.15
LRRK1-203ENST00000525395 TSPOAP1O95153 1857 aa15.99■□□□□ 0.15
LRRK1-203ENST00000525395 ZCCHC11Q5TAX3 1644 aaKnown RBP15.96■□□□□ 0.15
LRRK1-203ENST00000525395 GOLGA3Q08378 1498 aa15.96■□□□□ 0.14
LRRK1-203ENST00000525395 CHIC1Q5VXU3 224 aa15.95■□□□□ 0.14
LRRK1-203ENST00000525395 AEBP2Q6ZN18 517 aaPredicted RBP15.94■□□□□ 0.14
LRRK1-203ENST00000525395 ABCA8O94911 1581 aa15.94■□□□□ 0.14
LRRK1-203ENST00000525395 EPRSP07814 1512 aaKnown RBP15.94■□□□□ 0.14
LRRK1-203ENST00000525395 GLI2P10070 1586 aa15.93■□□□□ 0.14
LRRK1-203ENST00000525395 ARID3CA6NKF2 412 aa15.93■□□□□ 0.14
LRRK1-203ENST00000525395 RANGAP1P46060 587 aaPredicted RBP15.93■□□□□ 0.14
LRRK1-203ENST00000525395 PPRC1Q5VV67 1664 aaKnown RBP15.92■□□□□ 0.14
LRRK1-203ENST00000525395 KDM6BO15054 1643 aa15.91■□□□□ 0.14
LRRK1-203ENST00000525395 EEA1Q15075 1411 aa15.91■□□□□ 0.14
LRRK1-203ENST00000525395 KCNH8Q96L42 1107 aa15.9■□□□□ 0.14
LRRK1-203ENST00000525395 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
LRRK1-203ENST00000525395 COL17A1Q9UMD9 1497 aaPredicted RBP15.89■□□□□ 0.13
LRRK1-203ENST00000525395 WDR7Q9Y4E6 1490 aa15.88■□□□□ 0.13
LRRK1-203ENST00000525395 MAP3K4Q9Y6R4 1608 aa15.86■□□□□ 0.13
LRRK1-203ENST00000525395 ATP10BO94823 1461 aa15.85■□□□□ 0.13
LRRK1-203ENST00000525395 SAMD9Q5K651 1589 aa15.85■□□□□ 0.13
LRRK1-203ENST00000525395 KDM4FA0A1W2PPD8 638 aa15.83■□□□□ 0.12
LRRK1-203ENST00000525395 FHOD3Q2V2M9 1422 aa15.82■□□□□ 0.12
LRRK1-203ENST00000525395 KIF21BO75037 1637 aa15.79■□□□□ 0.12
LRRK1-203ENST00000525395 CD109Q6YHK3 1445 aa15.79■□□□□ 0.12
LRRK1-203ENST00000525395 RAPGEF6Q8TEU7 1601 aa15.76■□□□□ 0.11
LRRK1-203ENST00000525395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.76■□□□□ 0.11
LRRK1-203ENST00000525395 UBTFP17480 764 aaKnown RBP15.76■□□□□ 0.11
LRRK1-203ENST00000525395 HNRNPUL2Q1KMD3 747 aaKnown RBP15.76■□□□□ 0.11
LRRK1-203ENST00000525395 NUP153P49790 1475 aaKnown RBP15.76■□□□□ 0.11
LRRK1-203ENST00000525395 TEX14Q8IWB6 1497 aa15.76■□□□□ 0.11
LRRK1-203ENST00000525395 MAGI3Q5TCQ9 1506 aa15.75■□□□□ 0.11
LRRK1-203ENST00000525395 CFAP43Q8NDM7 1665 aa15.72■□□□□ 0.11
LRRK1-203ENST00000525395 EFCAB5A4FU69 1503 aa15.68■□□□□ 0.1
LRRK1-203ENST00000525395 ABCA9Q8IUA7 1624 aa15.67■□□□□ 0.1
LRRK1-203ENST00000525395 ARHGAP35Q9NRY4 1499 aa15.66■□□□□ 0.1
LRRK1-203ENST00000525395 PLEKHD1A6NEE1 506 aa15.66■□□□□ 0.1
LRRK1-203ENST00000525395 ADGRL1O94910 1474 aa15.65■□□□□ 0.1
LRRK1-203ENST00000525395 RAPGEF3O95398 923 aa15.64■□□□□ 0.09
LRRK1-203ENST00000525395 ATP1B4Q9UN42 357 aaPredicted RBP15.63■□□□□ 0.09
LRRK1-203ENST00000525395 CDK13Q14004 1512 aaKnown RBP15.63■□□□□ 0.09
LRRK1-203ENST00000525395 ARAP3Q8WWN8 1544 aa15.63■□□□□ 0.09
LRRK1-203ENST00000525395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.58■□□□□ 0.09
LRRK1-203ENST00000525395 FMN1Q68DA7 1419 aa15.57■□□□□ 0.08
LRRK1-203ENST00000525395 PHLDB1Q86UU1 1377 aa15.56■□□□□ 0.08
LRRK1-203ENST00000525395 NEO1Q92859 1461 aa15.56■□□□□ 0.08
LRRK1-203ENST00000525395 TTC37Q6PGP7 1564 aa15.54■□□□□ 0.08
LRRK1-203ENST00000525395 FRMPD1Q5SYB0 1578 aa15.53■□□□□ 0.08
LRRK1-203ENST00000525395 AKNAQ7Z591 1439 aa15.52■□□□□ 0.08
LRRK1-203ENST00000525395 FANCAO15360 1455 aa15.52■□□□□ 0.07
LRRK1-203ENST00000525395 HECW1Q76N89 1606 aa15.5■□□□□ 0.07
LRRK1-203ENST00000525395 LRRIQ1Q96JM4 1722 aa15.5■□□□□ 0.07
LRRK1-203ENST00000525395 PLCH2O75038 1416 aa15.49■□□□□ 0.07
LRRK1-203ENST00000525395 DENND4BO75064 1496 aaPredicted RBP15.48■□□□□ 0.07
LRRK1-203ENST00000525395 KIF14Q15058 1648 aa15.47■□□□□ 0.07
LRRK1-203ENST00000525395 CDK11AQ9UQ88 783 aaPredicted RBP15.47■□□□□ 0.07
LRRK1-203ENST00000525395 TROQ12816 1431 aaPredicted RBP15.45■□□□□ 0.06
LRRK1-203ENST00000525395 CASKIN1Q8WXD9 1431 aa15.45■□□□□ 0.06
LRRK1-203ENST00000525395 RICTORQ6R327 1708 aa15.45■□□□□ 0.06
LRRK1-203ENST00000525395 PCF11O94913 1555 aaKnown RBP15.45■□□□□ 0.06
LRRK1-203ENST00000525395 SCAPERQ9BY12 1400 aa15.44■□□□□ 0.06
LRRK1-203ENST00000525395 CLIP1P30622 1438 aa15.43■□□□□ 0.06
LRRK1-203ENST00000525395 YEATS2Q9ULM3 1422 aa15.43■□□□□ 0.06
LRRK1-203ENST00000525395 EFCAB2Q5VUJ9 269 aa15.43■□□□□ 0.06
LRRK1-203ENST00000525395 ARID4BQ4LE39 1312 aaPredicted RBP15.43■□□□□ 0.06
LRRK1-203ENST00000525395 ADAMTSL3P82987 1691 aa15.4■□□□□ 0.06
LRRK1-203ENST00000525395 CFAP74Q9C0B2 1584 aa15.4■□□□□ 0.06
LRRK1-203ENST00000525395 AFAP1Q8N556 730 aa15.39■□□□□ 0.05
LRRK1-203ENST00000525395 SIGLEC1Q9BZZ2 1709 aa15.39■□□□□ 0.05
LRRK1-203ENST00000525395 POGZQ7Z3K3 1410 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms