RNA–Protein interactions for RNA: ENST00000524846.5

GSDMD-202, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 3,462 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-202ENST00000524846 ATAD2BQ9ULI0 1458 aa21.29■■□□□ 1
GSDMD-202ENST00000524846 CCER2I3L3R5 266 aa21.28■■□□□ 1
GSDMD-202ENST00000524846 WDR97A6NE52 1622 aa21.27■■□□□ 1
GSDMD-202ENST00000524846 KIF27Q86VH2 1401 aa21.27■■□□□ 1
GSDMD-202ENST00000524846 PRXQ9BXM0 1461 aa21.27■■□□□ 1
GSDMD-202ENST00000524846 TONSLQ96HA7 1378 aa21.26■□□□□ 0.99
GSDMD-202ENST00000524846 ARHGAP35Q9NRY4 1499 aa21.21■□□□□ 0.99
GSDMD-202ENST00000524846 MAPKBP1O60336 1514 aa21.2■□□□□ 0.98
GSDMD-202ENST00000524846 PHLDB1Q86UU1 1377 aa21.19■□□□□ 0.98
GSDMD-202ENST00000524846 FAM9BQ8IZU0 186 aa21.17■□□□□ 0.98
GSDMD-202ENST00000524846 B4GALNT3Q6L9W6 998 aa21.14■□□□□ 0.97
GSDMD-202ENST00000524846 UNC13AQ9UPW8 1703 aa21.13■□□□□ 0.97
GSDMD-202ENST00000524846 TOP2BQ02880 1626 aa21.13■□□□□ 0.97
GSDMD-202ENST00000524846 CUX2O14529 1486 aa21.13■□□□□ 0.97
GSDMD-202ENST00000524846 ERICH3Q5RHP9 1530 aa21.13■□□□□ 0.97
GSDMD-202ENST00000524846 NBR1Q14596 966 aa21.12■□□□□ 0.97
GSDMD-202ENST00000524846 SENP3-EIF4A1A0A087X0R7 540 aa21.1■□□□□ 0.97
GSDMD-202ENST00000524846 TIMELESSQ9UNS1 1208 aa21.1■□□□□ 0.97
GSDMD-202ENST00000524846 BICRAQ9NZM4 1560 aa21.06■□□□□ 0.96
GSDMD-202ENST00000524846 POLR3GLQ9BT43 218 aa21.05■□□□□ 0.96
GSDMD-202ENST00000524846 CHIC2Q9UKJ5 165 aa21.05■□□□□ 0.96
GSDMD-202ENST00000524846 FANCIQ9NVI1 1328 aa21.04■□□□□ 0.96
GSDMD-202ENST00000524846 CARMIL1Q5VZK9 1371 aa21.03■□□□□ 0.96
GSDMD-202ENST00000524846 PPP4R2Q9NY27 417 aa21.02■□□□□ 0.96
GSDMD-202ENST00000524846 CCDC184Q52MB2 194 aa21.01■□□□□ 0.95
GSDMD-202ENST00000524846 LRRC9Q6ZRR7 1453 aa21.01■□□□□ 0.95
GSDMD-202ENST00000524846 MRS2Q9HD23 443 aa21.01■□□□□ 0.95
GSDMD-202ENST00000524846 PEG3Q9GZU2 1588 aa21.01■□□□□ 0.95
GSDMD-202ENST00000524846 DEKP35659 375 aaKnown RBP21■□□□□ 0.95
GSDMD-202ENST00000524846 CUX1P39880 1505 aa21■□□□□ 0.95
GSDMD-202ENST00000524846 IGF1RP08069 1367 aa21■□□□□ 0.95
GSDMD-202ENST00000524846 HSPA5P11021 654 aaKnown RBP21■□□□□ 0.95
GSDMD-202ENST00000524846 RRP7BPQ9NSQ0 103 aa21■□□□□ 0.95
GSDMD-202ENST00000524846 TIAM1Q13009 1591 aa20.93■□□□□ 0.94
GSDMD-202ENST00000524846 FHOD3Q2V2M9 1422 aa20.93■□□□□ 0.94
GSDMD-202ENST00000524846 EIF4G2P78344 907 aaKnown RBP eCLIP20.92■□□□□ 0.94
GSDMD-202ENST00000524846 WASHC2AQ641Q2 1341 aa20.91■□□□□ 0.94
GSDMD-202ENST00000524846 ARID3CA6NKF2 412 aa20.91■□□□□ 0.94
GSDMD-202ENST00000524846 MTUS2Q5JR59 1369 aa20.9■□□□□ 0.94
GSDMD-202ENST00000524846 FHAD1B1AJZ9 1412 aa20.9■□□□□ 0.94
GSDMD-202ENST00000524846 FOXD1Q16676 465 aa20.9■□□□□ 0.94
GSDMD-202ENST00000524846 BIVM-ERCC5R4GMW8 1640 aa20.87■□□□□ 0.93
GSDMD-202ENST00000524846 NOP58Q9Y2X3 529 aaKnown RBP20.86■□□□□ 0.93
GSDMD-202ENST00000524846 PAK3O75914 559 aaPredicted RBP20.84■□□□□ 0.93
GSDMD-202ENST00000524846 CCDC136Q96JN2 1154 aa20.82■□□□□ 0.92
GSDMD-202ENST00000524846 RTL5Q5HYW3 569 aaPredicted RBP20.82■□□□□ 0.92
GSDMD-202ENST00000524846 CCDC18Q5T9S5 1454 aa20.82■□□□□ 0.92
GSDMD-202ENST00000524846 ZNF326Q5BKZ1 582 aaKnown RBP20.81■□□□□ 0.92
GSDMD-202ENST00000524846 NPM2Q86SE8 214 aaKnown RBP20.81■□□□□ 0.92
GSDMD-202ENST00000524846 PRKRIP1Q9H875 184 aaPredicted RBP20.79■□□□□ 0.92
GSDMD-202ENST00000524846 C11orf95C9JLR9 678 aaPredicted RBP20.79■□□□□ 0.92
GSDMD-202ENST00000524846 ANP32AP39687 249 aaKnown RBP20.79■□□□□ 0.92
GSDMD-202ENST00000524846 L3MBTL2Q969R5 705 aa20.77■□□□□ 0.92
GSDMD-202ENST00000524846 ERICH6BQ5W0A0 696 aa20.77■□□□□ 0.91
GSDMD-202ENST00000524846 MYT1LQ9UL68 1186 aa20.77■□□□□ 0.91
GSDMD-202ENST00000524846 ZBTB47Q9UFB7 747 aaPredicted RBP20.74■□□□□ 0.91
GSDMD-202ENST00000524846 FGD6Q6ZV73 1430 aa20.73■□□□□ 0.91
GSDMD-202ENST00000524846 UACAQ9BZF9 1416 aa20.73■□□□□ 0.91
GSDMD-202ENST00000524846 PTPRKQ15262 1439 aa20.72■□□□□ 0.91
GSDMD-202ENST00000524846 SALL2Q9Y467 1007 aaPredicted RBP20.72■□□□□ 0.91
GSDMD-202ENST00000524846 MAP3K1Q13233 1512 aa20.7■□□□□ 0.9
GSDMD-202ENST00000524846 PCF11O94913 1555 aaKnown RBP20.7■□□□□ 0.9
GSDMD-202ENST00000524846 RTN4Q9NQC3 1192 aaKnown RBP20.69■□□□□ 0.9
GSDMD-202ENST00000524846 CFTRP13569 1480 aa20.69■□□□□ 0.9
GSDMD-202ENST00000524846 AQRO60306 1485 aaKnown RBP eCLIP20.68■□□□□ 0.9
GSDMD-202ENST00000524846 ZBED9Q6R2W3 1325 aa20.68■□□□□ 0.9
GSDMD-202ENST00000524846 MPHOSPH9Q99550 1183 aa20.67■□□□□ 0.9
GSDMD-202ENST00000524846 FGD5Q6ZNL6 1462 aa20.67■□□□□ 0.9
GSDMD-202ENST00000524846 FMN1Q68DA7 1419 aa20.64■□□□□ 0.9
GSDMD-202ENST00000524846 HFM1A2PYH4 1435 aa20.63■□□□□ 0.89
GSDMD-202ENST00000524846 AKNAQ7Z591 1439 aa20.63■□□□□ 0.89
GSDMD-202ENST00000524846 NAIPQ13075 1403 aa20.63■□□□□ 0.89
GSDMD-202ENST00000524846 CNTLNQ9NXG0 1405 aa20.63■□□□□ 0.89
GSDMD-202ENST00000524846 NCAPD3P42695 1498 aa20.62■□□□□ 0.89
GSDMD-202ENST00000524846 LAS1LQ9Y4W2 734 aaKnown RBP20.62■□□□□ 0.89
GSDMD-202ENST00000524846 CCDC7Q96M83 1385 aa20.61■□□□□ 0.89
GSDMD-202ENST00000524846 IPO9Q96P70 1041 aaKnown RBP20.61■□□□□ 0.89
GSDMD-202ENST00000524846 NBPF8Q3BBV2 869 aa20.61■□□□□ 0.89
GSDMD-202ENST00000524846 CASKIN1Q8WXD9 1431 aa20.6■□□□□ 0.89
GSDMD-202ENST00000524846 TMC1Q8TDI8 760 aa20.59■□□□□ 0.89
GSDMD-202ENST00000524846 SLC4A1APQ9BWU0 796 aaKnown RBP20.59■□□□□ 0.89
GSDMD-202ENST00000524846 RAD54L2Q9Y4B4 1467 aa20.58■□□□□ 0.89
GSDMD-202ENST00000524846 KIF7Q2M1P5 1343 aa20.58■□□□□ 0.89
GSDMD-202ENST00000524846 ANO8Q9HCE9 1232 aaPredicted RBP20.56■□□□□ 0.88
GSDMD-202ENST00000524846 NUDCQ9Y266 331 aa20.56■□□□□ 0.88
GSDMD-202ENST00000524846 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.56■□□□□ 0.88
GSDMD-202ENST00000524846 CADPSQ9ULU8 1353 aa20.56■□□□□ 0.88
GSDMD-202ENST00000524846 FYCO1Q9BQS8 1478 aa20.55■□□□□ 0.88
GSDMD-202ENST00000524846 NCOA2Q15596 1464 aa20.52■□□□□ 0.88
GSDMD-202ENST00000524846 MYOM3Q5VTT5 1437 aa20.51■□□□□ 0.87
GSDMD-202ENST00000524846 IL27Q8NEV9 243 aa20.5■□□□□ 0.87
GSDMD-202ENST00000524846 PTPN23Q9H3S7 1636 aa20.5■□□□□ 0.87
GSDMD-202ENST00000524846 NEFMP07197 916 aa20.49■□□□□ 0.87
GSDMD-202ENST00000524846 TDRD9Q8NDG6 1382 aaKnown RBP20.48■□□□□ 0.87
GSDMD-202ENST00000524846 KDM2AQ9Y2K7 1162 aa20.45■□□□□ 0.86
GSDMD-202ENST00000524846 HMGXB3Q12766 1538 aa20.44■□□□□ 0.86
GSDMD-202ENST00000524846 EXOC6Q8TAG9 804 aa20.44■□□□□ 0.86
GSDMD-202ENST00000524846 CFAP43Q8NDM7 1665 aa20.44■□□□□ 0.86
GSDMD-202ENST00000524846 ZNF777Q9ULD5 760 aaPredicted RBP20.44■□□□□ 0.86
GSDMD-202ENST00000524846 PRKCSHP14314 528 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms