RNA–Protein interactions for RNA: ENST00000524657.1

KDM2A-204, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 3,692 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-204ENST00000524657 EIF5BO60841 1220 aaKnown RBP13.48□□□□□ -0.25
KDM2A-204ENST00000524657 FAM50AQ14320 339 aaKnown RBP13.48□□□□□ -0.25
KDM2A-204ENST00000524657 EIF4G1Q04637 1599 aaKnown RBP13.47□□□□□ -0.25
KDM2A-204ENST00000524657 RAB3GAP2Q9H2M9 1393 aa13.46□□□□□ -0.25
KDM2A-204ENST00000524657 RAPGEF2Q9Y4G8 1499 aa13.46□□□□□ -0.25
KDM2A-204ENST00000524657 NPM2Q86SE8 214 aaKnown RBP13.46□□□□□ -0.26
KDM2A-204ENST00000524657 BAZ1BQ9UIG0 1483 aaKnown RBP13.45□□□□□ -0.26
KDM2A-204ENST00000524657 FAM9BQ8IZU0 186 aa13.45□□□□□ -0.26
KDM2A-204ENST00000524657 BAZ1AQ9NRL2 1556 aaPredicted RBP13.44□□□□□ -0.26
KDM2A-204ENST00000524657 WDR97A6NE52 1622 aa13.43□□□□□ -0.26
KDM2A-204ENST00000524657 ANP32AP39687 249 aaKnown RBP13.43□□□□□ -0.26
KDM2A-204ENST00000524657 ZBTB47Q9UFB7 747 aaPredicted RBP13.43□□□□□ -0.26
KDM2A-204ENST00000524657 LAS1LQ9Y4W2 734 aaKnown RBP13.42□□□□□ -0.26
KDM2A-204ENST00000524657 CCNB3Q8WWL7 1395 aa13.42□□□□□ -0.26
KDM2A-204ENST00000524657 KIF21BO75037 1637 aa13.4□□□□□ -0.26
KDM2A-204ENST00000524657 NACADO15069 1562 aa13.39□□□□□ -0.27
KDM2A-204ENST00000524657 ERICH6BQ5W0A0 696 aa13.38□□□□□ -0.27
KDM2A-204ENST00000524657 CCDC184Q52MB2 194 aa13.37□□□□□ -0.27
KDM2A-204ENST00000524657 IPO9Q96P70 1041 aaKnown RBP13.34□□□□□ -0.27
KDM2A-204ENST00000524657 NEFMP07197 916 aa13.33□□□□□ -0.28
KDM2A-204ENST00000524657 SMARCA2P51531 1590 aa13.32□□□□□ -0.28
KDM2A-204ENST00000524657 MAPKBP1O60336 1514 aa13.32□□□□□ -0.28
KDM2A-204ENST00000524657 TOP2AP11388 1531 aaKnown RBP13.31□□□□□ -0.28
KDM2A-204ENST00000524657 MRS2Q9HD23 443 aa13.3□□□□□ -0.28
KDM2A-204ENST00000524657 TONSLQ96HA7 1378 aa13.3□□□□□ -0.28
KDM2A-204ENST00000524657 RRBP1Q9P2E9 1410 aaKnown RBP13.29□□□□□ -0.28
KDM2A-204ENST00000524657 BRPF3Q9ULD4 1205 aa13.29□□□□□ -0.28
KDM2A-204ENST00000524657 SETD5Q9C0A6 1442 aa13.28□□□□□ -0.28
KDM2A-204ENST00000524657 POLR3GLQ9BT43 218 aa13.26□□□□□ -0.29
KDM2A-204ENST00000524657 UBE2Q2Q8WVN8 375 aa13.25□□□□□ -0.29
KDM2A-204ENST00000524657 P3H3Q8IVL6 736 aa13.25□□□□□ -0.29
KDM2A-204ENST00000524657 ARAP1Q96P48 1450 aa13.24□□□□□ -0.29
KDM2A-204ENST00000524657 SYNJ1O43426 1573 aa13.23□□□□□ -0.29
KDM2A-204ENST00000524657 TIMELESSQ9UNS1 1208 aa13.22□□□□□ -0.29
KDM2A-204ENST00000524657 HSPA5P11021 654 aaKnown RBP13.2□□□□□ -0.3
KDM2A-204ENST00000524657 PABPN1Q86U42 306 aaKnown RBP eCLIP13.2□□□□□ -0.3
KDM2A-204ENST00000524657 WASHC2AQ641Q2 1341 aa13.19□□□□□ -0.3
KDM2A-204ENST00000524657 AKNAQ7Z591 1439 aa13.19□□□□□ -0.3
KDM2A-204ENST00000524657 CUX2O14529 1486 aa13.18□□□□□ -0.3
KDM2A-204ENST00000524657 SLC24A1O60721 1099 aa13.17□□□□□ -0.3
KDM2A-204ENST00000524657 SLC4A3P48751 1232 aa13.15□□□□□ -0.3
KDM2A-204ENST00000524657 PHLDB1Q86UU1 1377 aa13.14□□□□□ -0.31
KDM2A-204ENST00000524657 PRKRIP1Q9H875 184 aaPredicted RBP13.14□□□□□ -0.31
KDM2A-204ENST00000524657 ZBED9Q6R2W3 1325 aa13.13□□□□□ -0.31
KDM2A-204ENST00000524657 SKAP1Q86WV1 359 aa13.11□□□□□ -0.31
KDM2A-204ENST00000524657 SMARCA4P51532 1647 aa13.11□□□□□ -0.31
KDM2A-204ENST00000524657 C11orf95C9JLR9 678 aaPredicted RBP13.1□□□□□ -0.31
KDM2A-204ENST00000524657 EIF4G2P78344 907 aaKnown RBP eCLIP13.1□□□□□ -0.31
KDM2A-204ENST00000524657 PDE4AP27815 886 aa13.09□□□□□ -0.31
KDM2A-204ENST00000524657 GSE1Q14687 1217 aa13.08□□□□□ -0.32
KDM2A-204ENST00000524657 FRAT1Q92837 279 aaPredicted RBP13.08□□□□□ -0.32
KDM2A-204ENST00000524657 PPM1GO15355 546 aaPredicted RBP13.07□□□□□ -0.32
KDM2A-204ENST00000524657 DAXXQ9UER7 740 aaPredicted RBP13.07□□□□□ -0.32
KDM2A-204ENST00000524657 ARID3CA6NKF2 412 aa13.07□□□□□ -0.32
KDM2A-204ENST00000524657 NUDCQ9Y266 331 aa13.06□□□□□ -0.32
KDM2A-204ENST00000524657 EXOC6Q8TAG9 804 aa13.06□□□□□ -0.32
KDM2A-204ENST00000524657 ARXQ96QS3 562 aa13.05□□□□□ -0.32
KDM2A-204ENST00000524657 USP35Q9P2H5 1018 aa13.05□□□□□ -0.32
KDM2A-204ENST00000524657 CHIC2Q9UKJ5 165 aa13.05□□□□□ -0.32
KDM2A-204ENST00000524657 ARHGAP35Q9NRY4 1499 aa13.05□□□□□ -0.32
KDM2A-204ENST00000524657 PKNOX2Q96KN3 472 aa13.04□□□□□ -0.32
KDM2A-204ENST00000524657 FOXD1Q16676 465 aa13.04□□□□□ -0.32
KDM2A-204ENST00000524657 NFKBIBQ15653 356 aa13.03□□□□□ -0.32
KDM2A-204ENST00000524657 WASHC2CQ9Y4E1 1318 aa13.03□□□□□ -0.32
KDM2A-204ENST00000524657 RRP7BPQ9NSQ0 103 aa13.03□□□□□ -0.32
KDM2A-204ENST00000524657 PRXQ9BXM0 1461 aa13.01□□□□□ -0.33
KDM2A-204ENST00000524657 ZNF326Q5BKZ1 582 aaKnown RBP13□□□□□ -0.33
KDM2A-204ENST00000524657 CNTLNQ9NXG0 1405 aa12.99□□□□□ -0.33
KDM2A-204ENST00000524657 BACH2Q9BYV9 841 aa12.98□□□□□ -0.33
KDM2A-204ENST00000524657 TCERG1O14776 1098 aaKnown RBP12.98□□□□□ -0.33
KDM2A-204ENST00000524657 L3MBTL2Q969R5 705 aa12.97□□□□□ -0.33
KDM2A-204ENST00000524657 VSIG10Q8N0Z9 540 aa12.97□□□□□ -0.33
KDM2A-204ENST00000524657 TMC1Q8TDI8 760 aa12.97□□□□□ -0.33
KDM2A-204ENST00000524657 FHAD1B1AJZ9 1412 aa12.96□□□□□ -0.33
KDM2A-204ENST00000524657 LRRC9Q6ZRR7 1453 aa12.96□□□□□ -0.33
KDM2A-204ENST00000524657 PLIN1O60240 522 aa12.96□□□□□ -0.34
KDM2A-204ENST00000524657 CCDC7Q96M83 1385 aa12.95□□□□□ -0.34
KDM2A-204ENST00000524657 FRAT2O75474 233 aaPredicted RBP12.95□□□□□ -0.34
KDM2A-204ENST00000524657 SMG6Q86US8 1419 aaKnown RBP12.94□□□□□ -0.34
KDM2A-204ENST00000524657 CCDC18Q5T9S5 1454 aa12.94□□□□□ -0.34
KDM2A-204ENST00000524657 DCAF11Q8TEB1 546 aa12.94□□□□□ -0.34
KDM2A-204ENST00000524657 RSPH6AQ9H0K4 717 aa12.94□□□□□ -0.34
KDM2A-204ENST00000524657 KIF27Q86VH2 1401 aa12.93□□□□□ -0.34
KDM2A-204ENST00000524657 KIF7Q2M1P5 1343 aa12.93□□□□□ -0.34
KDM2A-204ENST00000524657 RRP1P56182 461 aaKnown RBP12.92□□□□□ -0.34
KDM2A-204ENST00000524657 ERICH3Q5RHP9 1530 aa12.92□□□□□ -0.34
KDM2A-204ENST00000524657 DDRGK1Q96HY6 314 aa12.92□□□□□ -0.34
KDM2A-204ENST00000524657 TIAM1Q13009 1591 aa12.91□□□□□ -0.34
KDM2A-204ENST00000524657 AQRO60306 1485 aaKnown RBP eCLIP12.9□□□□□ -0.346e-7■■■■■ 27.9
KDM2A-204ENST00000524657 RCAN3Q9UKA8 241 aa12.9□□□□□ -0.35
KDM2A-204ENST00000524657 NBPF8Q3BBV2 869 aa12.89□□□□□ -0.35
KDM2A-204ENST00000524657 ARID4BQ4LE39 1312 aaPredicted RBP12.89□□□□□ -0.35
KDM2A-204ENST00000524657 NAP1L5Q96NT1 182 aaPredicted RBP12.89□□□□□ -0.35
KDM2A-204ENST00000524657 RNF123Q5XPI4 1314 aa12.88□□□□□ -0.35
KDM2A-204ENST00000524657 GLIPR1L2Q4G1C9 344 aa12.87□□□□□ -0.35
KDM2A-204ENST00000524657 ZMYND15Q9H091 742 aa12.87□□□□□ -0.35
KDM2A-204ENST00000524657 UACAQ9BZF9 1416 aa12.87□□□□□ -0.35
KDM2A-204ENST00000524657 RGS3P49796 1198 aa12.86□□□□□ -0.35
KDM2A-204ENST00000524657 PTPRKQ15262 1439 aa12.86□□□□□ -0.35
KDM2A-204ENST00000524657 FAM43AQ8N2R8 423 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms