RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 NUP160Q12769 1436 aa18.1■□□□□ 0.49
LAMA4-220ENST00000523765 ILDR1Q86SU0 546 aaPredicted RBP18.09■□□□□ 0.49
LAMA4-220ENST00000523765 KDM4FA0A1W2PPD8 638 aa18.06■□□□□ 0.48
LAMA4-220ENST00000523765 ABCC10Q5T3U5 1492 aa17.99■□□□□ 0.47
LAMA4-220ENST00000523765 DIP2BQ9P265 1576 aa17.99■□□□□ 0.47
LAMA4-220ENST00000523765 FAM69CQ0P6D2 419 aa17.98■□□□□ 0.47
LAMA4-220ENST00000523765 PRG4Q92954 1404 aaPredicted RBP17.98■□□□□ 0.47
LAMA4-220ENST00000523765 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
LAMA4-220ENST00000523765 KDM6BO15054 1643 aa17.95■□□□□ 0.46
LAMA4-220ENST00000523765 TSPOAP1O95153 1857 aa17.95■□□□□ 0.46
LAMA4-220ENST00000523765 FHAD1B1AJZ9 1412 aa17.94■□□□□ 0.46
LAMA4-220ENST00000523765 ADCY10Q96PN6 1610 aa17.93■□□□□ 0.46
LAMA4-220ENST00000523765 MAPKBP1O60336 1514 aa17.92■□□□□ 0.46
LAMA4-220ENST00000523765 WRNQ14191 1432 aaPredicted RBP eCLIP17.89■□□□□ 0.45
LAMA4-220ENST00000523765 BIVM-ERCC5R4GMW8 1640 aa17.88■□□□□ 0.45
LAMA4-220ENST00000523765 RUSC2Q8N2Y8 1516 aa17.88■□□□□ 0.45
LAMA4-220ENST00000523765 JPH4Q96JJ6 628 aa17.87■□□□□ 0.45
LAMA4-220ENST00000523765 ERICH3Q5RHP9 1530 aa17.87■□□□□ 0.45
LAMA4-220ENST00000523765 TOP2BQ02880 1626 aa17.84■□□□□ 0.45
LAMA4-220ENST00000523765 NPM1P06748 294 aaKnown RBP eCLIP17.79■□□□□ 0.44
LAMA4-220ENST00000523765 PPRC1Q5VV67 1664 aaKnown RBP17.77■□□□□ 0.44
LAMA4-220ENST00000523765 ADGRL1O94910 1474 aa17.76■□□□□ 0.43
LAMA4-220ENST00000523765 HECW2Q9P2P5 1572 aa17.74■□□□□ 0.43
LAMA4-220ENST00000523765 COL17A1Q9UMD9 1497 aaPredicted RBP17.67■□□□□ 0.42
LAMA4-220ENST00000523765 KIAA0586Q9BVV6 1533 aa17.63■□□□□ 0.41
LAMA4-220ENST00000523765 TTBK1Q5TCY1 1321 aaPredicted RBP17.63■□□□□ 0.41
LAMA4-220ENST00000523765 CUL7Q14999 1698 aa17.62■□□□□ 0.41
LAMA4-220ENST00000523765 GLI2P10070 1586 aa17.61■□□□□ 0.41
LAMA4-220ENST00000523765 ASXL2Q76L83 1435 aa17.6■□□□□ 0.41
LAMA4-220ENST00000523765 ABCC2Q92887 1545 aa17.58■□□□□ 0.41
LAMA4-220ENST00000523765 PTPRGP23470 1445 aa17.57■□□□□ 0.4
LAMA4-220ENST00000523765 SUPT5HO00267 1087 aaKnown RBP17.56■□□□□ 0.4
LAMA4-220ENST00000523765 MAP3K4Q9Y6R4 1608 aa17.56■□□□□ 0.4
LAMA4-220ENST00000523765 PLB1Q6P1J6 1458 aa17.53■□□□□ 0.4
LAMA4-220ENST00000523765 IGF1RP08069 1367 aa17.53■□□□□ 0.4
LAMA4-220ENST00000523765 EPRSP07814 1512 aaKnown RBP17.5■□□□□ 0.39
LAMA4-220ENST00000523765 TNIKQ9UKE5 1360 aa17.48■□□□□ 0.39
LAMA4-220ENST00000523765 UHRF1BP1LA0JNW5 1464 aa17.47■□□□□ 0.39
LAMA4-220ENST00000523765 ZCCHC11Q5TAX3 1644 aaKnown RBP17.46■□□□□ 0.39
LAMA4-220ENST00000523765 DISP1Q96F81 1524 aa17.42■□□□□ 0.38
LAMA4-220ENST00000523765 KDM5BQ9UGL1 1544 aa17.42■□□□□ 0.38
LAMA4-220ENST00000523765 IQGAP2Q13576 1575 aa17.42■□□□□ 0.38
LAMA4-220ENST00000523765 UACAQ9BZF9 1416 aa17.42■□□□□ 0.38
LAMA4-220ENST00000523765 FBXO41Q8TF61 875 aa17.42■□□□□ 0.38
LAMA4-220ENST00000523765 CARMIL2Q6F5E8 1435 aa17.41■□□□□ 0.38
LAMA4-220ENST00000523765 KIF21BO75037 1637 aa17.4■□□□□ 0.38
LAMA4-220ENST00000523765 TEX14Q8IWB6 1497 aa17.4■□□□□ 0.38
LAMA4-220ENST00000523765 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
LAMA4-220ENST00000523765 CARMIL1Q5VZK9 1371 aa17.36■□□□□ 0.37
LAMA4-220ENST00000523765 WDR7Q9Y4E6 1490 aa17.31■□□□□ 0.36
LAMA4-220ENST00000523765 KIAA0556O60303 1618 aa17.3■□□□□ 0.36
LAMA4-220ENST00000523765 CFAP43Q8NDM7 1665 aa17.29■□□□□ 0.36
LAMA4-220ENST00000523765 UGGT2Q9NYU1 1516 aa17.28■□□□□ 0.36
LAMA4-220ENST00000523765 MAGI3Q5TCQ9 1506 aa17.26■□□□□ 0.35
LAMA4-220ENST00000523765 CD109Q6YHK3 1445 aa17.26■□□□□ 0.35
LAMA4-220ENST00000523765 ADAMTSL3P82987 1691 aa17.26■□□□□ 0.35
LAMA4-220ENST00000523765 MAPK8IP2Q13387 824 aaPredicted RBP17.24■□□□□ 0.35
LAMA4-220ENST00000523765 PTPRMP28827 1452 aa17.23■□□□□ 0.35
LAMA4-220ENST00000523765 KCNH8Q96L42 1107 aa17.22■□□□□ 0.35
LAMA4-220ENST00000523765 ABCA8O94911 1581 aa17.18■□□□□ 0.34
LAMA4-220ENST00000523765 PCF11O94913 1555 aaKnown RBP17.17■□□□□ 0.34
LAMA4-220ENST00000523765 MADDQ8WXG6 1647 aa17.17■□□□□ 0.34
LAMA4-220ENST00000523765 LMTK3Q96Q04 1460 aa17.17■□□□□ 0.34
LAMA4-220ENST00000523765 ARAP3Q8WWN8 1544 aa17.16■□□□□ 0.34
LAMA4-220ENST00000523765 BCORL1Q5H9F3 1711 aa17.15■□□□□ 0.34
LAMA4-220ENST00000523765 RAPGEF2Q9Y4G8 1499 aa17.14■□□□□ 0.33
LAMA4-220ENST00000523765 CTTNBP2Q8WZ74 1663 aa17.13■□□□□ 0.33
LAMA4-220ENST00000523765 FRMPD1Q5SYB0 1578 aa17.11■□□□□ 0.33
LAMA4-220ENST00000523765 ILDR2Q71H61 639 aa17.1■□□□□ 0.33
LAMA4-220ENST00000523765 ARID3CA6NKF2 412 aa17.09■□□□□ 0.33
LAMA4-220ENST00000523765 RAPGEF3O95398 923 aa17.09■□□□□ 0.33
LAMA4-220ENST00000523765 RIMS1Q86UR5 1692 aaKnown RBP17.09■□□□□ 0.33
LAMA4-220ENST00000523765 HSPA2P54652 639 aa17.07■□□□□ 0.32
LAMA4-220ENST00000523765 ABCA9Q8IUA7 1624 aa17.07■□□□□ 0.32
LAMA4-220ENST00000523765 SIGLEC1Q9BZZ2 1709 aa17.04■□□□□ 0.32
LAMA4-220ENST00000523765 DMRT2Q9Y5R5 561 aa17.04■□□□□ 0.32
LAMA4-220ENST00000523765 ATP10BO94823 1461 aa17.02■□□□□ 0.32
LAMA4-220ENST00000523765 GOLGA3Q08378 1498 aa16.99■□□□□ 0.31
LAMA4-220ENST00000523765 ARID4BQ4LE39 1312 aaPredicted RBP16.99■□□□□ 0.31
LAMA4-220ENST00000523765 CERKQ8TCT0 537 aa16.99■□□□□ 0.31
LAMA4-220ENST00000523765 ARHGEF40Q8TER5 1519 aa16.97■□□□□ 0.31
LAMA4-220ENST00000523765 RICTORQ6R327 1708 aa16.96■□□□□ 0.31
LAMA4-220ENST00000523765 DISP3Q9P2K9 1392 aa16.96■□□□□ 0.31
LAMA4-220ENST00000523765 NEO1Q92859 1461 aa16.95■□□□□ 0.3
LAMA4-220ENST00000523765 SOCS7O14512 581 aa16.95■□□□□ 0.3
LAMA4-220ENST00000523765 P3H3Q8IVL6 736 aa16.94■□□□□ 0.3
LAMA4-220ENST00000523765 SCAF1Q9H7N4 1312 aaKnown RBP16.94■□□□□ 0.3
LAMA4-220ENST00000523765 PHLDB1Q86UU1 1377 aa16.93■□□□□ 0.3
LAMA4-220ENST00000523765 PPP4R3CPQ6ZMV5 832 aa16.9■□□□□ 0.3
LAMA4-220ENST00000523765 FER1L4A9Z1Z3 1794 aa16.88■□□□□ 0.29
LAMA4-220ENST00000523765 RAPGEF6Q8TEU7 1601 aa16.88■□□□□ 0.29
LAMA4-220ENST00000523765 YEATS2Q9ULM3 1422 aa16.87■□□□□ 0.29
LAMA4-220ENST00000523765 STRCQ7RTU9 1775 aa16.86■□□□□ 0.29
LAMA4-220ENST00000523765 SPATA31D1Q6ZQQ2 1576 aa16.85■□□□□ 0.29
LAMA4-220ENST00000523765 DENND4BO75064 1496 aaPredicted RBP16.85■□□□□ 0.29
LAMA4-220ENST00000523765 PRXQ9BXM0 1461 aa16.85■□□□□ 0.29
LAMA4-220ENST00000523765 TTC37Q6PGP7 1564 aa16.85■□□□□ 0.29
LAMA4-220ENST00000523765 MLECQ14165 292 aa16.83■□□□□ 0.28
LAMA4-220ENST00000523765 SAMD9Q5K651 1589 aa16.83■□□□□ 0.28
LAMA4-220ENST00000523765 PREX1Q8TCU6 1659 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms