RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 MAPKBP1O60336 1514 aa25.81■■□□□ 1.72
NKX3-1-202ENST00000523261 NPM1P06748 294 aaKnown RBP eCLIP25.73■■□□□ 1.71
NKX3-1-202ENST00000523261 JPH4Q96JJ6 628 aa25.73■■□□□ 1.71
NKX3-1-202ENST00000523261 WRNQ14191 1432 aaPredicted RBP eCLIP25.72■■□□□ 1.71
NKX3-1-202ENST00000523261 ADCY10Q96PN6 1610 aa25.68■■□□□ 1.7
NKX3-1-202ENST00000523261 ERICH3Q5RHP9 1530 aa25.68■■□□□ 1.7
NKX3-1-202ENST00000523261 TSPOAP1O95153 1857 aa25.66■■□□□ 1.7
NKX3-1-202ENST00000523261 RUSC2Q8N2Y8 1516 aa25.6■■□□□ 1.69
NKX3-1-202ENST00000523261 ADGRL1O94910 1474 aa25.56■■□□□ 1.68
NKX3-1-202ENST00000523261 BIVM-ERCC5R4GMW8 1640 aa25.55■■□□□ 1.68
NKX3-1-202ENST00000523261 TOP2BQ02880 1626 aa25.54■■□□□ 1.68
NKX3-1-202ENST00000523261 HECW2Q9P2P5 1572 aa25.52■■□□□ 1.68
NKX3-1-202ENST00000523261 PPRC1Q5VV67 1664 aaKnown RBP25.42■■□□□ 1.66
NKX3-1-202ENST00000523261 KIAA0586Q9BVV6 1533 aa25.37■■□□□ 1.65
NKX3-1-202ENST00000523261 GLI2P10070 1586 aa25.35■■□□□ 1.65
NKX3-1-202ENST00000523261 COL17A1Q9UMD9 1497 aaPredicted RBP25.34■■□□□ 1.65
NKX3-1-202ENST00000523261 ABCC2Q92887 1545 aa25.31■■□□□ 1.64
NKX3-1-202ENST00000523261 ASXL2Q76L83 1435 aa25.3■■□□□ 1.64
NKX3-1-202ENST00000523261 PTPRGP23470 1445 aa25.29■■□□□ 1.64
NKX3-1-202ENST00000523261 PLB1Q6P1J6 1458 aa25.29■■□□□ 1.64
NKX3-1-202ENST00000523261 FBXO41Q8TF61 875 aa25.26■■□□□ 1.63
NKX3-1-202ENST00000523261 TTBK1Q5TCY1 1321 aaPredicted RBP25.19■■□□□ 1.62
NKX3-1-202ENST00000523261 CUL7Q14999 1698 aa25.19■■□□□ 1.62
NKX3-1-202ENST00000523261 MAP3K4Q9Y6R4 1608 aa25.19■■□□□ 1.62
NKX3-1-202ENST00000523261 TNIKQ9UKE5 1360 aa25.17■■□□□ 1.62
NKX3-1-202ENST00000523261 UHRF1BP1LA0JNW5 1464 aa25.15■■□□□ 1.62
NKX3-1-202ENST00000523261 EPRSP07814 1512 aaKnown RBP25.15■■□□□ 1.62
NKX3-1-202ENST00000523261 TEX14Q8IWB6 1497 aa25.15■■□□□ 1.62
NKX3-1-202ENST00000523261 IGF1RP08069 1367 aa25.14■■□□□ 1.61
NKX3-1-202ENST00000523261 CARMIL2Q6F5E8 1435 aa25.12■■□□□ 1.61
NKX3-1-202ENST00000523261 UACAQ9BZF9 1416 aa25.08■■□□□ 1.61
NKX3-1-202ENST00000523261 KDM5BQ9UGL1 1544 aa25.06■■□□□ 1.6
NKX3-1-202ENST00000523261 SUPT5HO00267 1087 aaKnown RBP25.02■■□□□ 1.6
NKX3-1-202ENST00000523261 KIF27Q86VH2 1401 aa25■■□□□ 1.59
NKX3-1-202ENST00000523261 ZCCHC11Q5TAX3 1644 aaKnown RBP24.99■■□□□ 1.59
NKX3-1-202ENST00000523261 IQGAP2Q13576 1575 aa24.98■■□□□ 1.59
NKX3-1-202ENST00000523261 DISP1Q96F81 1524 aa24.96■■□□□ 1.59
NKX3-1-202ENST00000523261 CARMIL1Q5VZK9 1371 aa24.93■■□□□ 1.58
NKX3-1-202ENST00000523261 KIF21BO75037 1637 aa24.91■■□□□ 1.58
NKX3-1-202ENST00000523261 WDR7Q9Y4E6 1490 aa24.9■■□□□ 1.58
NKX3-1-202ENST00000523261 MAGI3Q5TCQ9 1506 aa24.88■■□□□ 1.57
NKX3-1-202ENST00000523261 LMTK3Q96Q04 1460 aa24.86■■□□□ 1.57
NKX3-1-202ENST00000523261 CD109Q6YHK3 1445 aa24.85■■□□□ 1.57
NKX3-1-202ENST00000523261 CFAP43Q8NDM7 1665 aa24.83■■□□□ 1.57
NKX3-1-202ENST00000523261 PTPRMP28827 1452 aa24.82■■□□□ 1.56
NKX3-1-202ENST00000523261 UGGT2Q9NYU1 1516 aa24.81■■□□□ 1.56
NKX3-1-202ENST00000523261 KIAA0556O60303 1618 aa24.78■■□□□ 1.56
NKX3-1-202ENST00000523261 ADAMTSL3P82987 1691 aa24.78■■□□□ 1.56
NKX3-1-202ENST00000523261 PCF11O94913 1555 aaKnown RBP24.74■■□□□ 1.55
NKX3-1-202ENST00000523261 ARAP3Q8WWN8 1544 aa24.72■■□□□ 1.55
NKX3-1-202ENST00000523261 KCNH8Q96L42 1107 aa24.72■■□□□ 1.55
NKX3-1-202ENST00000523261 ABCA8O94911 1581 aa24.63■■□□□ 1.53
NKX3-1-202ENST00000523261 BCORL1Q5H9F3 1711 aa24.62■■□□□ 1.53
NKX3-1-202ENST00000523261 ILDR2Q71H61 639 aa24.62■■□□□ 1.53
NKX3-1-202ENST00000523261 MADDQ8WXG6 1647 aa24.61■■□□□ 1.53
NKX3-1-202ENST00000523261 SOCS7O14512 581 aa24.61■■□□□ 1.53
NKX3-1-202ENST00000523261 RAPGEF2Q9Y4G8 1499 aa24.59■■□□□ 1.53
NKX3-1-202ENST00000523261 CERKQ8TCT0 537 aa24.56■■□□□ 1.52
NKX3-1-202ENST00000523261 PHLDB1Q86UU1 1377 aa24.54■■□□□ 1.52
NKX3-1-202ENST00000523261 DISP3Q9P2K9 1392 aa24.54■■□□□ 1.52
NKX3-1-202ENST00000523261 RAPGEF3O95398 923 aa24.53■■□□□ 1.52
NKX3-1-202ENST00000523261 HSPA2P54652 639 aa24.52■■□□□ 1.52
NKX3-1-202ENST00000523261 ARID4BQ4LE39 1312 aaPredicted RBP24.49■■□□□ 1.51
NKX3-1-202ENST00000523261 GOLGA3Q08378 1498 aa24.49■■□□□ 1.51
NKX3-1-202ENST00000523261 RIMS1Q86UR5 1692 aaKnown RBP24.49■■□□□ 1.51
NKX3-1-202ENST00000523261 FRMPD1Q5SYB0 1578 aa24.48■■□□□ 1.51
NKX3-1-202ENST00000523261 ABCA9Q8IUA7 1624 aa24.48■■□□□ 1.51
NKX3-1-202ENST00000523261 CTTNBP2Q8WZ74 1663 aa24.45■■□□□ 1.5
NKX3-1-202ENST00000523261 NEO1Q92859 1461 aa24.45■■□□□ 1.5
NKX3-1-202ENST00000523261 ATP10BO94823 1461 aa24.41■■□□□ 1.5
NKX3-1-202ENST00000523261 ARHGEF40Q8TER5 1519 aa24.4■■□□□ 1.5
NKX3-1-202ENST00000523261 ARID3CA6NKF2 412 aa24.38■■□□□ 1.49
NKX3-1-202ENST00000523261 PLPPR3Q6T4P5 718 aa24.33■■□□□ 1.49
NKX3-1-202ENST00000523261 SPATA31D1Q6ZQQ2 1576 aa24.31■■□□□ 1.48
NKX3-1-202ENST00000523261 RICTORQ6R327 1708 aa24.28■■□□□ 1.48
NKX3-1-202ENST00000523261 POGZQ7Z3K3 1410 aa24.27■■□□□ 1.48
NKX3-1-202ENST00000523261 FANCAO15360 1455 aa24.26■■□□□ 1.47
NKX3-1-202ENST00000523261 SIGLEC1Q9BZZ2 1709 aa24.26■■□□□ 1.47
NKX3-1-202ENST00000523261 DENND4BO75064 1496 aaPredicted RBP24.26■■□□□ 1.47
NKX3-1-202ENST00000523261 FHOD3Q2V2M9 1422 aa24.24■■□□□ 1.47
NKX3-1-202ENST00000523261 AKNAQ7Z591 1439 aa24.23■■□□□ 1.47
NKX3-1-202ENST00000523261 TTC37Q6PGP7 1564 aa24.21■■□□□ 1.47
NKX3-1-202ENST00000523261 FAM9AQ8IZU1 332 aaPredicted RBP24.21■■□□□ 1.47
NKX3-1-202ENST00000523261 ZMYM4Q5VZL5 1548 aa24.2■■□□□ 1.46
NKX3-1-202ENST00000523261 FER1L4A9Z1Z3 1794 aa24.19■■□□□ 1.46
NKX3-1-202ENST00000523261 YEATS2Q9ULM3 1422 aa24.18■■□□□ 1.46
NKX3-1-202ENST00000523261 P3H3Q8IVL6 736 aa24.18■■□□□ 1.46
NKX3-1-202ENST00000523261 ZFYVE16Q7Z3T8 1539 aa24.17■■□□□ 1.46
NKX3-1-202ENST00000523261 PREX1Q8TCU6 1659 aa24.17■■□□□ 1.46
NKX3-1-202ENST00000523261 STRCQ7RTU9 1775 aa24.16■■□□□ 1.46
NKX3-1-202ENST00000523261 RAPGEF6Q8TEU7 1601 aa24.15■■□□□ 1.46
NKX3-1-202ENST00000523261 MLECQ14165 292 aa24.15■■□□□ 1.46
NKX3-1-202ENST00000523261 EFCAB5A4FU69 1503 aa24.15■■□□□ 1.46
NKX3-1-202ENST00000523261 DMRT2Q9Y5R5 561 aa24.14■■□□□ 1.45
NKX3-1-202ENST00000523261 PRXQ9BXM0 1461 aa24.13■■□□□ 1.45
NKX3-1-202ENST00000523261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.12■■□□□ 1.45
NKX3-1-202ENST00000523261 HNRNPUL2Q1KMD3 747 aaKnown RBP24.12■■□□□ 1.45
NKX3-1-202ENST00000523261 MAGI2Q86UL8 1455 aa24.12■■□□□ 1.45
NKX3-1-202ENST00000523261 CFAP74Q9C0B2 1584 aa24.12■■□□□ 1.45
NKX3-1-202ENST00000523261 ARHGEF12Q9NZN5 1544 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms