RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 KIF27Q86VH2 1401 aa15.88■□□□□ 0.13
ERGIC1-211ENST00000523215 PCF11O94913 1555 aaKnown RBP15.88■□□□□ 0.13
ERGIC1-211ENST00000523215 FYCO1Q9BQS8 1478 aa15.87■□□□□ 0.13
ERGIC1-211ENST00000523215 DHX57Q6P158 1386 aaKnown RBP15.87■□□□□ 0.13
ERGIC1-211ENST00000523215 SNAPC4Q5SXM2 1469 aa15.87■□□□□ 0.13
ERGIC1-211ENST00000523215 KDM5BQ9UGL1 1544 aa15.86■□□□□ 0.13
ERGIC1-211ENST00000523215 FGD5Q6ZNL6 1462 aa15.85■□□□□ 0.13
ERGIC1-211ENST00000523215 TARBP1Q13395 1621 aaKnown RBP15.83■□□□□ 0.12
ERGIC1-211ENST00000523215 ACIN1Q9UKV3 1341 aaKnown RBP15.83■□□□□ 0.12
ERGIC1-211ENST00000523215 LRRC9Q6ZRR7 1453 aa15.8■□□□□ 0.12
ERGIC1-211ENST00000523215 HECW1Q76N89 1606 aa15.79■□□□□ 0.12
ERGIC1-211ENST00000523215 EIF5BO60841 1220 aaKnown RBP15.78■□□□□ 0.12
ERGIC1-211ENST00000523215 PBRM1Q86U86 1689 aa15.76■□□□□ 0.11
ERGIC1-211ENST00000523215 IGF1RP08069 1367 aa15.76■□□□□ 0.11
ERGIC1-211ENST00000523215 TCOF1Q13428 1488 aaKnown RBP15.74■□□□□ 0.11
ERGIC1-211ENST00000523215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.74■□□□□ 0.11
ERGIC1-211ENST00000523215 CADPSQ9ULU8 1353 aa15.73■□□□□ 0.11
ERGIC1-211ENST00000523215 AKNAQ7Z591 1439 aa15.73■□□□□ 0.11
ERGIC1-211ENST00000523215 CASKIN1Q8WXD9 1431 aa15.72■□□□□ 0.11
ERGIC1-211ENST00000523215 GRIN2BQ13224 1484 aa15.71■□□□□ 0.11
ERGIC1-211ENST00000523215 TOPBP1Q92547 1522 aa15.7■□□□□ 0.1
ERGIC1-211ENST00000523215 ADCY10Q96PN6 1610 aa15.69■□□□□ 0.1
ERGIC1-211ENST00000523215 ZNF316A6NFI3 1004 aaPredicted RBP15.68■□□□□ 0.1
ERGIC1-211ENST00000523215 PLPPR3Q6T4P5 718 aa15.66■□□□□ 0.1
ERGIC1-211ENST00000523215 UBTFP17480 764 aaKnown RBP15.66■□□□□ 0.1
ERGIC1-211ENST00000523215 UGGT2Q9NYU1 1516 aa15.65■□□□□ 0.1
ERGIC1-211ENST00000523215 PTPN23Q9H3S7 1636 aa15.65■□□□□ 0.1
ERGIC1-211ENST00000523215 CROCC2H7BZ55 1655 aa15.64■□□□□ 0.09
ERGIC1-211ENST00000523215 FHAD1B1AJZ9 1412 aa15.64■□□□□ 0.09
ERGIC1-211ENST00000523215 POLA1P09884 1462 aaPredicted RBP15.64■□□□□ 0.09
ERGIC1-211ENST00000523215 SUPT6HQ7KZ85 1726 aaKnown RBP15.62■□□□□ 0.09
ERGIC1-211ENST00000523215 CCNB3Q8WWL7 1395 aa15.61■□□□□ 0.09
ERGIC1-211ENST00000523215 EHBP1L1Q8N3D4 1523 aa15.61■□□□□ 0.09
ERGIC1-211ENST00000523215 NEUROD1Q13562 356 aa15.61■□□□□ 0.09
ERGIC1-211ENST00000523215 ADAMTS12P58397 1594 aa15.6■□□□□ 0.09
ERGIC1-211ENST00000523215 PLEKHG5O94827 1062 aa15.6■□□□□ 0.09
ERGIC1-211ENST00000523215 DIEXFQ68CQ4 756 aaKnown RBP15.59■□□□□ 0.09
ERGIC1-211ENST00000523215 FANCD2Q9BXW9 1451 aa15.58■□□□□ 0.08
ERGIC1-211ENST00000523215 URB2Q14146 1524 aaKnown RBP15.57■□□□□ 0.08
ERGIC1-211ENST00000523215 DENND4BO75064 1496 aaPredicted RBP15.57■□□□□ 0.08
ERGIC1-211ENST00000523215 CCER1Q8TC90 406 aaPredicted RBP15.56■□□□□ 0.08
ERGIC1-211ENST00000523215 TIMELESSQ9UNS1 1208 aa15.56■□□□□ 0.08
ERGIC1-211ENST00000523215 RTN4Q9NQC3 1192 aaKnown RBP15.54■□□□□ 0.08
ERGIC1-211ENST00000523215 ADGBQ8N7X0 1667 aa15.52■□□□□ 0.08
ERGIC1-211ENST00000523215 HFM1A2PYH4 1435 aa15.52■□□□□ 0.08
ERGIC1-211ENST00000523215 WDR62O43379 1518 aa15.51■□□□□ 0.07
ERGIC1-211ENST00000523215 MAGI3Q5TCQ9 1506 aa15.51■□□□□ 0.07
ERGIC1-211ENST00000523215 ARXQ96QS3 562 aa15.49■□□□□ 0.07
ERGIC1-211ENST00000523215 CCDC18Q5T9S5 1454 aa15.49■□□□□ 0.07
ERGIC1-211ENST00000523215 NCOA2Q15596 1464 aa15.48■□□□□ 0.07
ERGIC1-211ENST00000523215 PHLDB1Q86UU1 1377 aa15.47■□□□□ 0.07
ERGIC1-211ENST00000523215 DNMT1P26358 1616 aaKnown RBP15.47■□□□□ 0.07
ERGIC1-211ENST00000523215 SETD5Q9C0A6 1442 aa15.46■□□□□ 0.07
ERGIC1-211ENST00000523215 CARMIL1Q5VZK9 1371 aa15.46■□□□□ 0.07
ERGIC1-211ENST00000523215 IQGAP2Q13576 1575 aa15.46■□□□□ 0.06
ERGIC1-211ENST00000523215 NESP48681 1621 aa15.43■□□□□ 0.06
ERGIC1-211ENST00000523215 FMN1Q68DA7 1419 aa15.43■□□□□ 0.06
ERGIC1-211ENST00000523215 KANK4Q5T7N3 995 aaPredicted RBP15.43■□□□□ 0.06
ERGIC1-211ENST00000523215 E9PCH4 1651 aa15.42■□□□□ 0.06
ERGIC1-211ENST00000523215 FGD6Q6ZV73 1430 aa15.41■□□□□ 0.06
ERGIC1-211ENST00000523215 KDM5DQ9BY66 1539 aa15.41■□□□□ 0.06
ERGIC1-211ENST00000523215 RAB3GAP2Q9H2M9 1393 aa15.4■□□□□ 0.06
ERGIC1-211ENST00000523215 UACAQ9BZF9 1416 aa15.39■□□□□ 0.05
ERGIC1-211ENST00000523215 MBD5Q9P267 1494 aa15.39■□□□□ 0.05
ERGIC1-211ENST00000523215 DNAJC5BQ9UF47 199 aa15.38■□□□□ 0.05
ERGIC1-211ENST00000523215 CENPBP07199 599 aaPredicted RBP15.38■□□□□ 0.05
ERGIC1-211ENST00000523215 ITSN2Q9NZM3 1697 aa15.37■□□□□ 0.05
ERGIC1-211ENST00000523215 KIAA0556O60303 1618 aa15.36■□□□□ 0.05
ERGIC1-211ENST00000523215 MIA2Q96PC5 1412 aa15.36■□□□□ 0.05
ERGIC1-211ENST00000523215 LAMC1P11047 1609 aa15.35■□□□□ 0.05
ERGIC1-211ENST00000523215 KLHL34Q8N239 644 aa15.34■□□□□ 0.05
ERGIC1-211ENST00000523215 PTPRKQ15262 1439 aa15.34■□□□□ 0.05
ERGIC1-211ENST00000523215 NAIPQ13075 1403 aa15.33■□□□□ 0.04
ERGIC1-211ENST00000523215 KDM6BO15054 1643 aa15.33■□□□□ 0.04
ERGIC1-211ENST00000523215 ADGRL2O95490 1459 aa15.33■□□□□ 0.04
ERGIC1-211ENST00000523215 MYOM3Q5VTT5 1437 aa15.32■□□□□ 0.04
ERGIC1-211ENST00000523215 HNRNPUL2Q1KMD3 747 aaKnown RBP15.32■□□□□ 0.04
ERGIC1-211ENST00000523215 RANGAP1P46060 587 aaPredicted RBP15.29■□□□□ 0.04
ERGIC1-211ENST00000523215 CDC42BPAQ5VT25 1732 aa15.29■□□□□ 0.04
ERGIC1-211ENST00000523215 RAD54L2Q9Y4B4 1467 aa15.28■□□□□ 0.04
ERGIC1-211ENST00000523215 ROCK1Q13464 1354 aa15.28■□□□□ 0.04
ERGIC1-211ENST00000523215 MIER1Q8N108 512 aa15.28■□□□□ 0.04
ERGIC1-211ENST00000523215 TEX14Q8IWB6 1497 aa15.27■□□□□ 0.03
ERGIC1-211ENST00000523215 RAPGEF6Q8TEU7 1601 aa15.26■□□□□ 0.03
ERGIC1-211ENST00000523215 GAPVD1Q14C86 1478 aa15.26■□□□□ 0.03
ERGIC1-211ENST00000523215 KIF14Q15058 1648 aa15.26■□□□□ 0.03
ERGIC1-211ENST00000523215 GTF3C3Q9Y5Q9 886 aa15.25■□□□□ 0.03
ERGIC1-211ENST00000523215 PPP1R15AO75807 674 aaPredicted RBP15.25■□□□□ 0.03
ERGIC1-211ENST00000523215 DISP1Q96F81 1524 aa15.25■□□□□ 0.03
ERGIC1-211ENST00000523215 MAST1Q9Y2H9 1570 aa15.23■□□□□ 0.03
ERGIC1-211ENST00000523215 EPRSP07814 1512 aaKnown RBP15.22■□□□□ 0.03
ERGIC1-211ENST00000523215 SPATA31E1Q6ZUB1 1445 aa15.22■□□□□ 0.03
ERGIC1-211ENST00000523215 SHANK2Q9UPX8 1470 aa15.21■□□□□ 0.03
ERGIC1-211ENST00000523215 CEP170Q5SW79 1584 aa15.21■□□□□ 0.03
ERGIC1-211ENST00000523215 SHROOM2Q13796 1616 aa15.2■□□□□ 0.02
ERGIC1-211ENST00000523215 ARHGEF5Q12774 1597 aa15.2■□□□□ 0.02
ERGIC1-211ENST00000523215 FHOD3Q2V2M9 1422 aa15.18■□□□□ 0.02
ERGIC1-211ENST00000523215 ZMYM4Q5VZL5 1548 aa15.18■□□□□ 0.02
ERGIC1-211ENST00000523215 EIF4G3O43432 1585 aaKnown RBP15.18■□□□□ 0.02
ERGIC1-211ENST00000523215 ABCA8O94911 1581 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms