RNA–Protein interactions for RNA: ENST00000522202.5

HDAC11-221, Transcript of histone deacetylase 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC11, Length 1,559 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-221ENST00000522202 MAGI1Q96QZ7 1491 aaPredicted RBP29.46■■■□□ 2.31
HDAC11-221ENST00000522202 TRIM26Q12899 539 aaPredicted RBP29.44■■■□□ 2.3
HDAC11-221ENST00000522202 PCGF6Q9BYE7 350 aa29.39■■■□□ 2.29
HDAC11-221ENST00000522202 EFCAB5A4FU69 1503 aa29.37■■■□□ 2.29
HDAC11-221ENST00000522202 PPARGC1BQ86YN6 1023 aaKnown RBP29.34■■■□□ 2.29
HDAC11-221ENST00000522202 SYNJ2O15056 1496 aa29.33■■■□□ 2.29
HDAC11-221ENST00000522202 APLP2Q06481 763 aa29.33■■■□□ 2.29
HDAC11-221ENST00000522202 GRIN2AQ12879 1464 aa29.33■■■□□ 2.29
HDAC11-221ENST00000522202 CHMP7Q8WUX9 453 aaPredicted RBP29.3■■■□□ 2.28
HDAC11-221ENST00000522202 IQGAP2Q13576 1575 aa29.26■■■□□ 2.27
HDAC11-221ENST00000522202 SAMD9Q5K651 1589 aa29.23■■■□□ 2.27
HDAC11-221ENST00000522202 P3H3Q8IVL6 736 aa29.22■■■□□ 2.27
HDAC11-221ENST00000522202 KIAA0586Q9BVV6 1533 aa29.22■■■□□ 2.27
HDAC11-221ENST00000522202 FBLN2P98095 1184 aa29.2■■■□□ 2.26
HDAC11-221ENST00000522202 FHOD3Q2V2M9 1422 aa29.19■■■□□ 2.26
HDAC11-221ENST00000522202 UGGT2Q9NYU1 1516 aa29.13■■■□□ 2.25
HDAC11-221ENST00000522202 FMN1Q68DA7 1419 aa29.12■■■□□ 2.25
HDAC11-221ENST00000522202 CEP170Q5SW79 1584 aa29.12■■■□□ 2.25
HDAC11-221ENST00000522202 TTBK1Q5TCY1 1321 aaPredicted RBP29.11■■■□□ 2.25
HDAC11-221ENST00000522202 NUP160Q12769 1436 aa29.11■■■□□ 2.25
HDAC11-221ENST00000522202 PCF11O94913 1555 aaKnown RBP29.05■■■□□ 2.24
HDAC11-221ENST00000522202 MAP3K1Q13233 1512 aa29.05■■■□□ 2.24
HDAC11-221ENST00000522202 FYCO1Q9BQS8 1478 aa29.04■■■□□ 2.24
HDAC11-221ENST00000522202 CASKIN1Q8WXD9 1431 aa29.04■■■□□ 2.24
HDAC11-221ENST00000522202 CHD1O14646 1710 aa29■■■□□ 2.23
HDAC11-221ENST00000522202 TIAM1Q13009 1591 aa28.98■■■□□ 2.23
HDAC11-221ENST00000522202 ATP1B4Q9UN42 357 aaPredicted RBP28.96■■■□□ 2.23
HDAC11-221ENST00000522202 DISP1Q96F81 1524 aa28.95■■■□□ 2.23
HDAC11-221ENST00000522202 KIAA0556O60303 1618 aa28.95■■■□□ 2.23
HDAC11-221ENST00000522202 KANK4Q5T7N3 995 aaPredicted RBP28.95■■■□□ 2.22
HDAC11-221ENST00000522202 JPH4Q96JJ6 628 aa28.92■■■□□ 2.22
HDAC11-221ENST00000522202 CFAP43Q8NDM7 1665 aa28.92■■■□□ 2.22
HDAC11-221ENST00000522202 CARMIL2Q6F5E8 1435 aa28.89■■■□□ 2.21
HDAC11-221ENST00000522202 LRRC9Q6ZRR7 1453 aa28.84■■■□□ 2.21
HDAC11-221ENST00000522202 HECW1Q76N89 1606 aa28.8■■■□□ 2.2
HDAC11-221ENST00000522202 CCDC18Q5T9S5 1454 aa28.76■■■□□ 2.19
HDAC11-221ENST00000522202 LRRIQ1Q96JM4 1722 aa28.76■■■□□ 2.19
HDAC11-221ENST00000522202 PRG4Q92954 1404 aaPredicted RBP28.72■■■□□ 2.19
HDAC11-221ENST00000522202 SHROOM2Q13796 1616 aa28.7■■■□□ 2.19
HDAC11-221ENST00000522202 RAPGEF6Q8TEU7 1601 aa28.69■■■□□ 2.18
HDAC11-221ENST00000522202 EPRSP07814 1512 aaKnown RBP28.67■■■□□ 2.18
HDAC11-221ENST00000522202 MTUS2Q5JR59 1369 aa28.67■■■□□ 2.18
HDAC11-221ENST00000522202 CLASP1Q7Z460 1538 aa28.66■■■□□ 2.18
HDAC11-221ENST00000522202 RRBP1Q9P2E9 1410 aaKnown RBP28.65■■■□□ 2.18
HDAC11-221ENST00000522202 EHBP1L1Q8N3D4 1523 aa28.6■■■□□ 2.17
HDAC11-221ENST00000522202 NUP153P49790 1475 aaKnown RBP28.59■■■□□ 2.17
HDAC11-221ENST00000522202 PLB1Q6P1J6 1458 aa28.58■■■□□ 2.17
HDAC11-221ENST00000522202 CCNB3Q8WWL7 1395 aa28.57■■■□□ 2.16
HDAC11-221ENST00000522202 CDK13Q14004 1512 aaKnown RBP28.57■■■□□ 2.16
HDAC11-221ENST00000522202 PTPRGP23470 1445 aa28.57■■■□□ 2.16
HDAC11-221ENST00000522202 PHLDB1Q86UU1 1377 aa28.55■■■□□ 2.16
HDAC11-221ENST00000522202 SUPT6HQ7KZ85 1726 aaKnown RBP28.55■■■□□ 2.16
HDAC11-221ENST00000522202 HRCP23327 699 aa28.54■■■□□ 2.16
HDAC11-221ENST00000522202 ABCA8O94911 1581 aa28.54■■■□□ 2.16
HDAC11-221ENST00000522202 HNRNPUL2Q1KMD3 747 aaKnown RBP28.52■■■□□ 2.16
HDAC11-221ENST00000522202 ARID3CA6NKF2 412 aa28.51■■■□□ 2.15
HDAC11-221ENST00000522202 MAGI3Q5TCQ9 1506 aa28.51■■■□□ 2.15
HDAC11-221ENST00000522202 CDK11AQ9UQ88 783 aaPredicted RBP28.5■■■□□ 2.15
HDAC11-221ENST00000522202 NCOA2Q15596 1464 aa28.48■■■□□ 2.15
HDAC11-221ENST00000522202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.47■■■□□ 2.15
HDAC11-221ENST00000522202 ERCC6L2Q5T890 1561 aa28.45■■■□□ 2.15
HDAC11-221ENST00000522202 OSCARQ8IYS5 282 aa28.44■■■□□ 2.14
HDAC11-221ENST00000522202 ARHGEF11O15085 1522 aa28.43■■■□□ 2.14
HDAC11-221ENST00000522202 UACAQ9BZF9 1416 aa28.4■■■□□ 2.14
HDAC11-221ENST00000522202 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.39■■■□□ 2.14
HDAC11-221ENST00000522202 MYOM3Q5VTT5 1437 aa28.39■■■□□ 2.13
HDAC11-221ENST00000522202 FGD6Q6ZV73 1430 aa28.39■■■□□ 2.13
HDAC11-221ENST00000522202 FAM50AQ14320 339 aaKnown RBP28.37■■■□□ 2.13
HDAC11-221ENST00000522202 ATP10BO94823 1461 aa28.36■■■□□ 2.13
HDAC11-221ENST00000522202 TROQ12816 1431 aaPredicted RBP28.36■■■□□ 2.13
HDAC11-221ENST00000522202 PLEKHD1A6NEE1 506 aa28.31■■■□□ 2.12
HDAC11-221ENST00000522202 ZEB1P37275 1124 aaPredicted RBP28.31■■■□□ 2.12
HDAC11-221ENST00000522202 ABCC2Q92887 1545 aa28.29■■■□□ 2.12
HDAC11-221ENST00000522202 ITGAEP38570 1179 aa28.28■■■□□ 2.12
HDAC11-221ENST00000522202 CCER1Q8TC90 406 aaPredicted RBP28.28■■■□□ 2.12
HDAC11-221ENST00000522202 ADCY10Q96PN6 1610 aa28.26■■■□□ 2.12
HDAC11-221ENST00000522202 MIA2Q96PC5 1412 aa28.25■■■□□ 2.11
HDAC11-221ENST00000522202 UHRF1BP1LA0JNW5 1464 aa28.24■■■□□ 2.11
HDAC11-221ENST00000522202 PTPN23Q9H3S7 1636 aa28.24■■■□□ 2.11
HDAC11-221ENST00000522202 TCOF1Q13428 1488 aaKnown RBP28.2■■■□□ 2.1
HDAC11-221ENST00000522202 KIF14Q15058 1648 aa28.18■■■□□ 2.1
HDAC11-221ENST00000522202 ITSN2Q9NZM3 1697 aa28.14■■■□□ 2.1
HDAC11-221ENST00000522202 KDM5BQ9UGL1 1544 aa28.11■■■□□ 2.09
HDAC11-221ENST00000522202 ZCCHC11Q5TAX3 1644 aaKnown RBP28.09■■■□□ 2.09
HDAC11-221ENST00000522202 GPATCH8Q9UKJ3 1502 aaKnown RBP28.09■■■□□ 2.09
HDAC11-221ENST00000522202 ABCC10Q5T3U5 1492 aa28.08■■■□□ 2.09
HDAC11-221ENST00000522202 SETD5Q9C0A6 1442 aa28.07■■■□□ 2.08
HDAC11-221ENST00000522202 CFDP1Q9UEE9 299 aaPredicted RBP28.06■■■□□ 2.08
HDAC11-221ENST00000522202 CDC42BPAQ5VT25 1732 aa28.02■■■□□ 2.08
HDAC11-221ENST00000522202 PTPRKQ15262 1439 aa28.02■■■□□ 2.08
HDAC11-221ENST00000522202 RAB3GAP2Q9H2M9 1393 aa28.01■■■□□ 2.08
HDAC11-221ENST00000522202 ZNF644Q9H582 1327 aaPredicted RBP27.96■■■□□ 2.07
HDAC11-221ENST00000522202 CAMSAP2Q08AD1 1489 aa27.96■■■□□ 2.07
HDAC11-221ENST00000522202 DNMT1P26358 1616 aaKnown RBP27.94■■■□□ 2.06
HDAC11-221ENST00000522202 HFM1A2PYH4 1435 aa27.94■■■□□ 2.06
HDAC11-221ENST00000522202 DHX57Q6P158 1386 aaKnown RBP27.93■■■□□ 2.06
HDAC11-221ENST00000522202 ZNF777Q9ULD5 760 aaPredicted RBP27.93■■■□□ 2.06
HDAC11-221ENST00000522202 DAPK1P53355 1430 aa27.92■■■□□ 2.06
HDAC11-221ENST00000522202 KCNH8Q96L42 1107 aa27.91■■■□□ 2.06
HDAC11-221ENST00000522202 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms