RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 SHROOM2Q13796 1616 aa16.32■□□□□ 0.2
MRPS28-207ENST00000521434 FHAD1B1AJZ9 1412 aa16.25■□□□□ 0.19
MRPS28-207ENST00000521434 WRNQ14191 1432 aaPredicted RBP eCLIP16.25■□□□□ 0.19
MRPS28-207ENST00000521434 ERICH3Q5RHP9 1530 aa16.19■□□□□ 0.18
MRPS28-207ENST00000521434 BIVM-ERCC5R4GMW8 1640 aa16.19■□□□□ 0.18
MRPS28-207ENST00000521434 PIAS4Q8N2W9 510 aaPredicted RBP16.19■□□□□ 0.18
MRPS28-207ENST00000521434 PRG4Q92954 1404 aaPredicted RBP16.19■□□□□ 0.18
MRPS28-207ENST00000521434 TOP2BQ02880 1626 aa16.17■□□□□ 0.18
MRPS28-207ENST00000521434 ABCC10Q5T3U5 1492 aa16.16■□□□□ 0.18
MRPS28-207ENST00000521434 FAM69CQ0P6D2 419 aa16.15■□□□□ 0.18
MRPS28-207ENST00000521434 JPH4Q96JJ6 628 aa16.15■□□□□ 0.18
MRPS28-207ENST00000521434 MAPKBP1O60336 1514 aa16.13■□□□□ 0.17
MRPS28-207ENST00000521434 NPM1P06748 294 aaKnown RBP eCLIP16.12■□□□□ 0.17
MRPS28-207ENST00000521434 DIP2BQ9P265 1576 aa16.12■□□□□ 0.17
MRPS28-207ENST00000521434 RUSC2Q8N2Y8 1516 aa16.09■□□□□ 0.17
MRPS28-207ENST00000521434 KDM6BO15054 1643 aa16.08■□□□□ 0.17
MRPS28-207ENST00000521434 ADCY10Q96PN6 1610 aa16.08■□□□□ 0.17
MRPS28-207ENST00000521434 TSPOAP1O95153 1857 aa16.08■□□□□ 0.16
MRPS28-207ENST00000521434 KDM4FA0A1W2PPD8 638 aa16.07■□□□□ 0.16
MRPS28-207ENST00000521434 SUPT5HO00267 1087 aaKnown RBP16■□□□□ 0.15
MRPS28-207ENST00000521434 ILDR1Q86SU0 546 aaPredicted RBP15.98■□□□□ 0.15
MRPS28-207ENST00000521434 KIAA0586Q9BVV6 1533 aa15.96■□□□□ 0.15
MRPS28-207ENST00000521434 CUL7Q14999 1698 aa15.9■□□□□ 0.14
MRPS28-207ENST00000521434 PTPRGP23470 1445 aa15.89■□□□□ 0.13
MRPS28-207ENST00000521434 PPRC1Q5VV67 1664 aaKnown RBP15.89■□□□□ 0.13
MRPS28-207ENST00000521434 IGF1RP08069 1367 aa15.87■□□□□ 0.13
MRPS28-207ENST00000521434 ADGRL1O94910 1474 aa15.86■□□□□ 0.13
MRPS28-207ENST00000521434 ABCC2Q92887 1545 aa15.86■□□□□ 0.13
MRPS28-207ENST00000521434 GLI2P10070 1586 aa15.86■□□□□ 0.13
MRPS28-207ENST00000521434 ASXL2Q76L83 1435 aa15.85■□□□□ 0.13
MRPS28-207ENST00000521434 PLB1Q6P1J6 1458 aa15.84■□□□□ 0.13
MRPS28-207ENST00000521434 KIF27Q86VH2 1401 aa15.84■□□□□ 0.13
MRPS28-207ENST00000521434 TNIKQ9UKE5 1360 aa15.83■□□□□ 0.12
MRPS28-207ENST00000521434 TTBK1Q5TCY1 1321 aaPredicted RBP15.82■□□□□ 0.12
MRPS28-207ENST00000521434 CARMIL2Q6F5E8 1435 aa15.82■□□□□ 0.12
MRPS28-207ENST00000521434 UHRF1BP1LA0JNW5 1464 aa15.79■□□□□ 0.12
MRPS28-207ENST00000521434 MAP3K4Q9Y6R4 1608 aa15.78■□□□□ 0.12
MRPS28-207ENST00000521434 HECW2Q9P2P5 1572 aa15.78■□□□□ 0.12
MRPS28-207ENST00000521434 IQGAP2Q13576 1575 aa15.77■□□□□ 0.11
MRPS28-207ENST00000521434 COL17A1Q9UMD9 1497 aaPredicted RBP15.77■□□□□ 0.11
MRPS28-207ENST00000521434 CARMIL1Q5VZK9 1371 aa15.76■□□□□ 0.11
MRPS28-207ENST00000521434 UACAQ9BZF9 1416 aa15.76■□□□□ 0.11
MRPS28-207ENST00000521434 TEX14Q8IWB6 1497 aa15.75■□□□□ 0.11
MRPS28-207ENST00000521434 EPRSP07814 1512 aaKnown RBP15.74■□□□□ 0.11
MRPS28-207ENST00000521434 KDM5BQ9UGL1 1544 aa15.73■□□□□ 0.11
MRPS28-207ENST00000521434 DISP1Q96F81 1524 aa15.71■□□□□ 0.11
MRPS28-207ENST00000521434 ZCCHC11Q5TAX3 1644 aaKnown RBP15.71■□□□□ 0.11
MRPS28-207ENST00000521434 UGGT2Q9NYU1 1516 aa15.64■□□□□ 0.09
MRPS28-207ENST00000521434 WDR7Q9Y4E6 1490 aa15.63■□□□□ 0.09
MRPS28-207ENST00000521434 KIAA0556O60303 1618 aa15.62■□□□□ 0.09
MRPS28-207ENST00000521434 CFAP43Q8NDM7 1665 aa15.6■□□□□ 0.09
MRPS28-207ENST00000521434 MAGI3Q5TCQ9 1506 aa15.58■□□□□ 0.09
MRPS28-207ENST00000521434 CD109Q6YHK3 1445 aa15.58■□□□□ 0.08
MRPS28-207ENST00000521434 RAPGEF2Q9Y4G8 1499 aa15.58■□□□□ 0.08
MRPS28-207ENST00000521434 KIF21BO75037 1637 aa15.56■□□□□ 0.08
MRPS28-207ENST00000521434 FBXO41Q8TF61 875 aa15.55■□□□□ 0.08
MRPS28-207ENST00000521434 CTTNBP2Q8WZ74 1663 aa15.52■□□□□ 0.08
MRPS28-207ENST00000521434 KCNH8Q96L42 1107 aa15.52■□□□□ 0.08
MRPS28-207ENST00000521434 ABCA8O94911 1581 aa15.51■□□□□ 0.07
MRPS28-207ENST00000521434 GOLGA3Q08378 1498 aa15.49■□□□□ 0.07
MRPS28-207ENST00000521434 ARAP3Q8WWN8 1544 aa15.48■□□□□ 0.07
MRPS28-207ENST00000521434 ADAMTSL3P82987 1691 aa15.46■□□□□ 0.07
MRPS28-207ENST00000521434 PTPRMP28827 1452 aa15.45■□□□□ 0.06
MRPS28-207ENST00000521434 PHLDB1Q86UU1 1377 aa15.41■□□□□ 0.06
MRPS28-207ENST00000521434 ABCA9Q8IUA7 1624 aa15.39■□□□□ 0.05
MRPS28-207ENST00000521434 BCORL1Q5H9F3 1711 aa15.39■□□□□ 0.05
MRPS28-207ENST00000521434 PCF11O94913 1555 aaKnown RBP15.38■□□□□ 0.05
MRPS28-207ENST00000521434 ATP10BO94823 1461 aa15.37■□□□□ 0.05
MRPS28-207ENST00000521434 MADDQ8WXG6 1647 aa15.36■□□□□ 0.05
MRPS28-207ENST00000521434 FAM9AQ8IZU1 332 aaPredicted RBP15.36■□□□□ 0.05
MRPS28-207ENST00000521434 RAPGEF3O95398 923 aa15.35■□□□□ 0.05
MRPS28-207ENST00000521434 NEO1Q92859 1461 aa15.34■□□□□ 0.05
MRPS28-207ENST00000521434 LMTK3Q96Q04 1460 aa15.34■□□□□ 0.05
MRPS28-207ENST00000521434 ARID3CA6NKF2 412 aa15.34■□□□□ 0.05
MRPS28-207ENST00000521434 FRMPD1Q5SYB0 1578 aa15.32■□□□□ 0.04
MRPS28-207ENST00000521434 ARID4BQ4LE39 1312 aaPredicted RBP15.32■□□□□ 0.04
MRPS28-207ENST00000521434 PRXQ9BXM0 1461 aa15.32■□□□□ 0.04
MRPS28-207ENST00000521434 RIMS1Q86UR5 1692 aaKnown RBP15.31■□□□□ 0.04
MRPS28-207ENST00000521434 P3H3Q8IVL6 736 aa15.28■□□□□ 0.04
MRPS28-207ENST00000521434 RAPGEF6Q8TEU7 1601 aa15.28■□□□□ 0.04
MRPS28-207ENST00000521434 ARHGEF40Q8TER5 1519 aa15.27■□□□□ 0.04
MRPS28-207ENST00000521434 RICTORQ6R327 1708 aa15.26■□□□□ 0.03
MRPS28-207ENST00000521434 SAMD9Q5K651 1589 aa15.24■□□□□ 0.03
MRPS28-207ENST00000521434 DENND4BO75064 1496 aaPredicted RBP15.23■□□□□ 0.03
MRPS28-207ENST00000521434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.23■□□□□ 0.03
MRPS28-207ENST00000521434 HSPA2P54652 639 aa15.23■□□□□ 0.03
MRPS28-207ENST00000521434 HNRNPUL2Q1KMD3 747 aaKnown RBP15.23■□□□□ 0.03
MRPS28-207ENST00000521434 CFAP74Q9C0B2 1584 aa15.21■□□□□ 0.03
MRPS28-207ENST00000521434 POGZQ7Z3K3 1410 aa15.21■□□□□ 0.03
MRPS28-207ENST00000521434 FANCAO15360 1455 aa15.2■□□□□ 0.02
MRPS28-207ENST00000521434 FHOD3Q2V2M9 1422 aa15.2■□□□□ 0.02
MRPS28-207ENST00000521434 CERKQ8TCT0 537 aa15.2■□□□□ 0.02
MRPS28-207ENST00000521434 NUP153P49790 1475 aaKnown RBP15.2■□□□□ 0.02
MRPS28-207ENST00000521434 AKNAQ7Z591 1439 aa15.19■□□□□ 0.02
MRPS28-207ENST00000521434 ZMYM4Q5VZL5 1548 aa15.18■□□□□ 0.02
MRPS28-207ENST00000521434 SIGLEC1Q9BZZ2 1709 aa15.18■□□□□ 0.02
MRPS28-207ENST00000521434 FER1L4A9Z1Z3 1794 aa15.18■□□□□ 0.02
MRPS28-207ENST00000521434 EFCAB5A4FU69 1503 aa15.17■□□□□ 0.02
MRPS28-207ENST00000521434 ZFYVE16Q7Z3T8 1539 aa15.17■□□□□ 0.02
MRPS28-207ENST00000521434 PLEKHD1A6NEE1 506 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms