RNA–Protein interactions for RNA: ENST00000520867.5

CPEB4-208, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-208ENST00000520867 PRDM4Q9UKN5 801 aa17.46■□□□□ 0.39
CPEB4-208ENST00000520867 GSE1Q14687 1217 aa17.46■□□□□ 0.39
CPEB4-208ENST00000520867 RANGAP1P46060 587 aaPredicted RBP17.45■□□□□ 0.38
CPEB4-208ENST00000520867 PPP4R2Q9NY27 417 aa17.41■□□□□ 0.38
CPEB4-208ENST00000520867 LAS1LQ9Y4W2 734 aaKnown RBP17.41■□□□□ 0.38
CPEB4-208ENST00000520867 PAXIP1Q6ZW49 1069 aaPredicted RBP17.41■□□□□ 0.38
CPEB4-208ENST00000520867 NAP1L2Q9ULW6 460 aaPredicted RBP17.37■□□□□ 0.37
CPEB4-208ENST00000520867 HNRNPUL2Q1KMD3 747 aaKnown RBP17.36■□□□□ 0.37
CPEB4-208ENST00000520867 ARXQ96QS3 562 aa17.36■□□□□ 0.37
CPEB4-208ENST00000520867 HSP90AA1P07900 732 aaKnown RBP17.36■□□□□ 0.37
CPEB4-208ENST00000520867 RGS3P49796 1198 aa17.35■□□□□ 0.37
CPEB4-208ENST00000520867 DCAF11Q8TEB1 546 aa17.34■□□□□ 0.37
CPEB4-208ENST00000520867 FRAT1Q92837 279 aaPredicted RBP17.34■□□□□ 0.37
CPEB4-208ENST00000520867 B4GALNT3Q6L9W6 998 aa17.33■□□□□ 0.36
CPEB4-208ENST00000520867 RRAGDQ9NQL2 400 aaPredicted RBP17.33■□□□□ 0.36
CPEB4-208ENST00000520867 BBXQ8WY36 941 aaPredicted RBP17.32■□□□□ 0.36
CPEB4-208ENST00000520867 CHMP4BQ9H444 224 aaKnown RBP17.32■□□□□ 0.36
CPEB4-208ENST00000520867 CALD1Q05682 793 aaKnown RBP17.31■□□□□ 0.36
CPEB4-208ENST00000520867 GTF2E1P29083 439 aaPredicted RBP17.3■□□□□ 0.36
CPEB4-208ENST00000520867 RSPH4AQ5TD94 716 aa17.3■□□□□ 0.36
CPEB4-208ENST00000520867 CEP162Q5TB80 1403 aa17.28■□□□□ 0.36
CPEB4-208ENST00000520867 PPM1GO15355 546 aaPredicted RBP17.27■□□□□ 0.36
CPEB4-208ENST00000520867 NAP1L5Q96NT1 182 aaPredicted RBP17.26■□□□□ 0.35
CPEB4-208ENST00000520867 CCER2I3L3R5 266 aa17.22■□□□□ 0.35
CPEB4-208ENST00000520867 NACADO15069 1562 aa17.21■□□□□ 0.35
CPEB4-208ENST00000520867 CENPJQ9HC77 1338 aaPredicted RBP17.2■□□□□ 0.34
CPEB4-208ENST00000520867 STAC3Q96MF2 364 aa17.2■□□□□ 0.34
CPEB4-208ENST00000520867 ABCC9O60706 1549 aa17.19■□□□□ 0.34
CPEB4-208ENST00000520867 DHX57Q6P158 1386 aaKnown RBP17.19■□□□□ 0.34
CPEB4-208ENST00000520867 DHX37Q8IY37 1157 aaKnown RBP17.17■□□□□ 0.34
CPEB4-208ENST00000520867 IPO4Q8TEX9 1081 aaKnown RBP17.17■□□□□ 0.34
CPEB4-208ENST00000520867 RB1CC1Q8TDY2 1594 aa17.17■□□□□ 0.34
CPEB4-208ENST00000520867 DDX10Q13206 875 aaKnown RBP17.16■□□□□ 0.34
CPEB4-208ENST00000520867 NFKBIBQ15653 356 aa17.15■□□□□ 0.34
CPEB4-208ENST00000520867 PNNQ9H307 717 aaKnown RBP17.13■□□□□ 0.33
CPEB4-208ENST00000520867 FOXD1Q16676 465 aa17.12■□□□□ 0.33
CPEB4-208ENST00000520867 PDCL3Q9H2J4 239 aa17.12■□□□□ 0.33
CPEB4-208ENST00000520867 CANXP27824 592 aaKnown RBP17.11■□□□□ 0.33
CPEB4-208ENST00000520867 ZNF326Q5BKZ1 582 aaKnown RBP17.11■□□□□ 0.33
CPEB4-208ENST00000520867 TNIKQ9UKE5 1360 aa17.11■□□□□ 0.33
CPEB4-208ENST00000520867 EEA1Q15075 1411 aa17.1■□□□□ 0.33
CPEB4-208ENST00000520867 NPM2Q86SE8 214 aaKnown RBP17.09■□□□□ 0.33
CPEB4-208ENST00000520867 RSF1Q96T23 1441 aaPredicted RBP17.09■□□□□ 0.33
CPEB4-208ENST00000520867 BRD2P25440 801 aaKnown RBP17.08■□□□□ 0.33
CPEB4-208ENST00000520867 CHMP4AQ9BY43 222 aa17.07■□□□□ 0.32
CPEB4-208ENST00000520867 PPP1R15AO75807 674 aaPredicted RBP17.07■□□□□ 0.32
CPEB4-208ENST00000520867 DCAF8L2P0C7V8 631 aa17.06■□□□□ 0.32
CPEB4-208ENST00000520867 CLCN1P35523 988 aa17.05■□□□□ 0.32
CPEB4-208ENST00000520867 HNRNPUQ00839 825 aaKnown RBP eCLIP17.05■□□□□ 0.32
CPEB4-208ENST00000520867 ANP32CO43423 234 aa17.05■□□□□ 0.32
CPEB4-208ENST00000520867 CNGB1Q14028 1251 aaPredicted RBP17■□□□□ 0.31
CPEB4-208ENST00000520867 ZFP91Q96JP5 570 aaPredicted RBP17■□□□□ 0.31
CPEB4-208ENST00000520867 ARID4BQ4LE39 1312 aaPredicted RBP17■□□□□ 0.31
CPEB4-208ENST00000520867 BAZ1BQ9UIG0 1483 aaKnown RBP17■□□□□ 0.31
CPEB4-208ENST00000520867 SIN3AQ96ST3 1273 aa16.99■□□□□ 0.31
CPEB4-208ENST00000520867 NCAPD3P42695 1498 aa16.97■□□□□ 0.31
CPEB4-208ENST00000520867 DDRGK1Q96HY6 314 aa16.96■□□□□ 0.3
CPEB4-208ENST00000520867 ZHX1Q9UKY1 873 aaPredicted RBP16.95■□□□□ 0.3
CPEB4-208ENST00000520867 ZNF830Q96NB3 372 aaPredicted RBP16.95■□□□□ 0.3
CPEB4-208ENST00000520867 PLCD3Q8N3E9 789 aa16.94■□□□□ 0.3
CPEB4-208ENST00000520867 TMEM51Q9NW97 253 aa16.93■□□□□ 0.3
CPEB4-208ENST00000520867 FTSJ3Q8IY81 847 aaKnown RBP16.92■□□□□ 0.3
CPEB4-208ENST00000520867 SAMD1Q6SPF0 538 aaPredicted RBP16.91■□□□□ 0.3
CPEB4-208ENST00000520867 FRAT2O75474 233 aaPredicted RBP16.9■□□□□ 0.3
CPEB4-208ENST00000520867 SMAP1Q8IYB5 467 aaPredicted RBP16.89■□□□□ 0.29
CPEB4-208ENST00000520867 SECISBP2LQ93073 1101 aaKnown RBP16.88■□□□□ 0.29
CPEB4-208ENST00000520867 TPM2P07951 284 aa16.88■□□□□ 0.29
CPEB4-208ENST00000520867 CHRM1P11229 460 aaPredicted RBP16.88■□□□□ 0.29
CPEB4-208ENST00000520867 TEX2Q8IWB9 1127 aa16.87■□□□□ 0.29
CPEB4-208ENST00000520867 VGLL3A8MV65 326 aa16.86■□□□□ 0.29
CPEB4-208ENST00000520867 PDE4AP27815 886 aa16.86■□□□□ 0.29
CPEB4-208ENST00000520867 BACH2Q9BYV9 841 aa16.84■□□□□ 0.29
CPEB4-208ENST00000520867 UBTFP17480 764 aaKnown RBP16.83■□□□□ 0.28
CPEB4-208ENST00000520867 SLC4A3P48751 1232 aa16.82■□□□□ 0.28
CPEB4-208ENST00000520867 POGKQ9P215 609 aa16.81■□□□□ 0.28
CPEB4-208ENST00000520867 NCLP19338 710 aaKnown RBP16.8■□□□□ 0.28
CPEB4-208ENST00000520867 L1TD1Q5T7N2 865 aaKnown RBP16.8■□□□□ 0.28
CPEB4-208ENST00000520867 PPP4R3BQ5MIZ7 849 aa16.77■□□□□ 0.28
CPEB4-208ENST00000520867 UTP14CQ5TAP6 766 aaKnown RBP16.77■□□□□ 0.28
CPEB4-208ENST00000520867 HAP1P54257 671 aaPredicted RBP16.77■□□□□ 0.27
CPEB4-208ENST00000520867 WDR97A6NE52 1622 aa16.76■□□□□ 0.27
CPEB4-208ENST00000520867 TCERG1O14776 1098 aaKnown RBP16.76■□□□□ 0.27
CPEB4-208ENST00000520867 PEG3Q9GZU2 1588 aa16.75■□□□□ 0.27
CPEB4-208ENST00000520867 GOLGA3Q08378 1498 aa16.75■□□□□ 0.27
CPEB4-208ENST00000520867 CUX2O14529 1486 aa16.75■□□□□ 0.27
CPEB4-208ENST00000520867 DMTNQ08495 405 aa16.75■□□□□ 0.27
CPEB4-208ENST00000520867 VPS8Q8N3P4 1428 aa16.74■□□□□ 0.27
CPEB4-208ENST00000520867 XRCC6P12956 609 aaKnown RBP eCLIP16.74■□□□□ 0.27
CPEB4-208ENST00000520867 PRDM10Q9NQV6 1147 aa16.74■□□□□ 0.27
CPEB4-208ENST00000520867 HIRIP3Q9BW71 556 aaPredicted RBP16.73■□□□□ 0.27
CPEB4-208ENST00000520867 ABCC8Q09428 1581 aa16.73■□□□□ 0.27
CPEB4-208ENST00000520867 ERBB4Q15303 1308 aa16.72■□□□□ 0.27
CPEB4-208ENST00000520867 CLIP1P30622 1438 aa16.71■□□□□ 0.27
CPEB4-208ENST00000520867 RIPK4P57078 832 aa16.71■□□□□ 0.27
CPEB4-208ENST00000520867 PANK2Q9BZ23 570 aa16.71■□□□□ 0.27
CPEB4-208ENST00000520867 RNF216Q9NWF9 866 aaPredicted RBP16.7■□□□□ 0.26
CPEB4-208ENST00000520867 MAP7D2Q96T17 732 aa16.69■□□□□ 0.26
CPEB4-208ENST00000520867 AKNAQ7Z591 1439 aa16.69■□□□□ 0.26
CPEB4-208ENST00000520867 ESPNB1AK53 854 aa16.69■□□□□ 0.26
CPEB4-208ENST00000520867 MAPKBP1O60336 1514 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms