RNA–Protein interactions for RNA: ENST00000519535.1

SCUBE2-205, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 3

Gene SCUBE2, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-205ENST00000519535 PRG4Q92954 1404 aaPredicted RBP23.32■■□□□ 1.32
SCUBE2-205ENST00000519535 CUL7Q14999 1698 aa23.28■■□□□ 1.32
SCUBE2-205ENST00000519535 KIAA0586Q9BVV6 1533 aa23.24■■□□□ 1.31
SCUBE2-205ENST00000519535 TRHP20396 242 aaPredicted RBP23.19■■□□□ 1.3
SCUBE2-205ENST00000519535 RAPGEF2Q9Y4G8 1499 aa23.13■■□□□ 1.29
SCUBE2-205ENST00000519535 PRXQ9BXM0 1461 aa23.07■■□□□ 1.28
SCUBE2-205ENST00000519535 DISP1Q96F81 1524 aa23.03■■□□□ 1.28
SCUBE2-205ENST00000519535 IQGAP2Q13576 1575 aa23.03■■□□□ 1.28
SCUBE2-205ENST00000519535 TTBK1Q5TCY1 1321 aaPredicted RBP23.02■■□□□ 1.28
SCUBE2-205ENST00000519535 ADCY10Q96PN6 1610 aa23■■□□□ 1.27
SCUBE2-205ENST00000519535 PTPRGP23470 1445 aa22.98■■□□□ 1.27
SCUBE2-205ENST00000519535 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
SCUBE2-205ENST00000519535 TNIKQ9UKE5 1360 aa22.96■■□□□ 1.27
SCUBE2-205ENST00000519535 UGGT2Q9NYU1 1516 aa22.96■■□□□ 1.27
SCUBE2-205ENST00000519535 CSRNP3Q8WYN3 585 aa22.94■■□□□ 1.26
SCUBE2-205ENST00000519535 CARMIL2Q6F5E8 1435 aa22.91■■□□□ 1.26
SCUBE2-205ENST00000519535 FAM9AQ8IZU1 332 aaPredicted RBP22.91■■□□□ 1.26
SCUBE2-205ENST00000519535 KIAA0556O60303 1618 aa22.86■■□□□ 1.25
SCUBE2-205ENST00000519535 MAPKBP1O60336 1514 aa22.83■■□□□ 1.25
SCUBE2-205ENST00000519535 UACAQ9BZF9 1416 aa22.82■■□□□ 1.24
SCUBE2-205ENST00000519535 ABCC10Q5T3U5 1492 aa22.81■■□□□ 1.24
SCUBE2-205ENST00000519535 CTTNBP2Q8WZ74 1663 aa22.81■■□□□ 1.24
SCUBE2-205ENST00000519535 NPM1P06748 294 aaKnown RBP eCLIP22.8■■□□□ 1.24
SCUBE2-205ENST00000519535 ABCC2Q92887 1545 aa22.79■■□□□ 1.24
SCUBE2-205ENST00000519535 FAM69CQ0P6D2 419 aa22.79■■□□□ 1.24
SCUBE2-205ENST00000519535 KIF13AQ9H1H9 1805 aa22.79■■□□□ 1.24
SCUBE2-205ENST00000519535 UHRF1BP1LA0JNW5 1464 aa22.79■■□□□ 1.24
SCUBE2-205ENST00000519535 EEA1Q15075 1411 aa22.78■■□□□ 1.24
SCUBE2-205ENST00000519535 PLB1Q6P1J6 1458 aa22.76■■□□□ 1.23
SCUBE2-205ENST00000519535 DIP2BQ9P265 1576 aa22.76■■□□□ 1.23
SCUBE2-205ENST00000519535 P3H3Q8IVL6 736 aa22.75■■□□□ 1.23
SCUBE2-205ENST00000519535 ASXL2Q76L83 1435 aa22.72■■□□□ 1.23
SCUBE2-205ENST00000519535 KDM5BQ9UGL1 1544 aa22.71■■□□□ 1.23
SCUBE2-205ENST00000519535 EHMT2Q96KQ7 1210 aa22.7■■□□□ 1.22
SCUBE2-205ENST00000519535 GOLGA3Q08378 1498 aa22.69■■□□□ 1.22
SCUBE2-205ENST00000519535 ABCA8O94911 1581 aa22.67■■□□□ 1.22
SCUBE2-205ENST00000519535 RANGAP1P46060 587 aaPredicted RBP22.67■■□□□ 1.22
SCUBE2-205ENST00000519535 SAMD9Q5K651 1589 aa22.63■■□□□ 1.21
SCUBE2-205ENST00000519535 KIF21BO75037 1637 aa22.63■■□□□ 1.21
SCUBE2-205ENST00000519535 ZCCHC11Q5TAX3 1644 aaKnown RBP22.62■■□□□ 1.21
SCUBE2-205ENST00000519535 ARID3CA6NKF2 412 aa22.61■■□□□ 1.21
SCUBE2-205ENST00000519535 FHOD3Q2V2M9 1422 aa22.58■■□□□ 1.21
SCUBE2-205ENST00000519535 EPRSP07814 1512 aaKnown RBP22.58■■□□□ 1.21
SCUBE2-205ENST00000519535 GLI2P10070 1586 aa22.55■■□□□ 1.2
SCUBE2-205ENST00000519535 ATP10BO94823 1461 aa22.53■■□□□ 1.2
SCUBE2-205ENST00000519535 WDR7Q9Y4E6 1490 aa22.52■■□□□ 1.2
SCUBE2-205ENST00000519535 PPRC1Q5VV67 1664 aaKnown RBP22.52■■□□□ 1.2
SCUBE2-205ENST00000519535 TSPOAP1O95153 1857 aa22.49■■□□□ 1.19
SCUBE2-205ENST00000519535 UBTFP17480 764 aaKnown RBP22.48■■□□□ 1.19
SCUBE2-205ENST00000519535 COL17A1Q9UMD9 1497 aaPredicted RBP22.47■■□□□ 1.19
SCUBE2-205ENST00000519535 KCNH8Q96L42 1107 aa22.46■■□□□ 1.19
SCUBE2-205ENST00000519535 NUP153P49790 1475 aaKnown RBP22.46■■□□□ 1.19
SCUBE2-205ENST00000519535 MAP3K4Q9Y6R4 1608 aa22.43■■□□□ 1.18
SCUBE2-205ENST00000519535 RAPGEF6Q8TEU7 1601 aa22.42■■□□□ 1.18
SCUBE2-205ENST00000519535 ARHGAP35Q9NRY4 1499 aa22.41■■□□□ 1.18
SCUBE2-205ENST00000519535 EFCAB5A4FU69 1503 aa22.4■■□□□ 1.18
SCUBE2-205ENST00000519535 KDM6BO15054 1643 aa22.39■■□□□ 1.18
SCUBE2-205ENST00000519535 CD109Q6YHK3 1445 aa22.34■■□□□ 1.17
SCUBE2-205ENST00000519535 MAGI3Q5TCQ9 1506 aa22.3■■□□□ 1.16
SCUBE2-205ENST00000519535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.29■■□□□ 1.16
SCUBE2-205ENST00000519535 HNRNPUL2Q1KMD3 747 aaKnown RBP22.29■■□□□ 1.16
SCUBE2-205ENST00000519535 CDK13Q14004 1512 aaKnown RBP22.29■■□□□ 1.16
SCUBE2-205ENST00000519535 TEX14Q8IWB6 1497 aa22.26■■□□□ 1.15
SCUBE2-205ENST00000519535 CFAP43Q8NDM7 1665 aa22.23■■□□□ 1.15
SCUBE2-205ENST00000519535 ABCA9Q8IUA7 1624 aa22.22■■□□□ 1.15
SCUBE2-205ENST00000519535 KDM4FA0A1W2PPD8 638 aa22.21■■□□□ 1.15
SCUBE2-205ENST00000519535 ATP1B4Q9UN42 357 aaPredicted RBP22.19■■□□□ 1.14
SCUBE2-205ENST00000519535 FMN1Q68DA7 1419 aa22.19■■□□□ 1.14
SCUBE2-205ENST00000519535 PLEKHD1A6NEE1 506 aa22.18■■□□□ 1.14
SCUBE2-205ENST00000519535 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.14■■□□□ 1.13
SCUBE2-205ENST00000519535 CLIP1P30622 1438 aa22.13■■□□□ 1.13
SCUBE2-205ENST00000519535 TTC37Q6PGP7 1564 aa22.12■■□□□ 1.13
SCUBE2-205ENST00000519535 AEBP2Q6ZN18 517 aaPredicted RBP22.12■■□□□ 1.13
SCUBE2-205ENST00000519535 LRRIQ1Q96JM4 1722 aa22.11■■□□□ 1.13
SCUBE2-205ENST00000519535 ARAP3Q8WWN8 1544 aa22.11■■□□□ 1.13
SCUBE2-205ENST00000519535 HECW1Q76N89 1606 aa22.1■■□□□ 1.13
SCUBE2-205ENST00000519535 PCF11O94913 1555 aaKnown RBP22.1■■□□□ 1.13
SCUBE2-205ENST00000519535 RAPGEF3O95398 923 aa22.1■■□□□ 1.13
SCUBE2-205ENST00000519535 LOC105371045A0A1W2PR82 267 aa22.09■■□□□ 1.13
SCUBE2-205ENST00000519535 CASKIN1Q8WXD9 1431 aa22.08■■□□□ 1.13
SCUBE2-205ENST00000519535 NEO1Q92859 1461 aa22.06■■□□□ 1.12
SCUBE2-205ENST00000519535 KIF14Q15058 1648 aa22.05■■□□□ 1.12
SCUBE2-205ENST00000519535 FRMPD1Q5SYB0 1578 aa22.04■■□□□ 1.12
SCUBE2-205ENST00000519535 TROQ12816 1431 aaPredicted RBP22.02■■□□□ 1.12
SCUBE2-205ENST00000519535 ADGRL1O94910 1474 aa22.02■■□□□ 1.12
SCUBE2-205ENST00000519535 AKNAQ7Z591 1439 aa22.01■■□□□ 1.11
SCUBE2-205ENST00000519535 FANCAO15360 1455 aa22■■□□□ 1.11
SCUBE2-205ENST00000519535 PHLDB1Q86UU1 1377 aa21.99■■□□□ 1.11
SCUBE2-205ENST00000519535 PLCH2O75038 1416 aa21.99■■□□□ 1.11
SCUBE2-205ENST00000519535 CEP162Q5TB80 1403 aa21.99■■□□□ 1.11
SCUBE2-205ENST00000519535 FYCO1Q9BQS8 1478 aa21.96■■□□□ 1.11
SCUBE2-205ENST00000519535 DENND4BO75064 1496 aaPredicted RBP21.93■■□□□ 1.1
SCUBE2-205ENST00000519535 CDK11AQ9UQ88 783 aaPredicted RBP21.93■■□□□ 1.1
SCUBE2-205ENST00000519535 CCDC18Q5T9S5 1454 aa21.92■■□□□ 1.1
SCUBE2-205ENST00000519535 SCAPERQ9BY12 1400 aa21.89■■□□□ 1.1
SCUBE2-205ENST00000519535 YEATS2Q9ULM3 1422 aa21.89■■□□□ 1.09
SCUBE2-205ENST00000519535 RICTORQ6R327 1708 aa21.88■■□□□ 1.09
SCUBE2-205ENST00000519535 EFCAB2Q5VUJ9 269 aa21.86■■□□□ 1.09
SCUBE2-205ENST00000519535 POGZQ7Z3K3 1410 aa21.85■■□□□ 1.09
SCUBE2-205ENST00000519535 ARHGEF12Q9NZN5 1544 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms