RNA–Protein interactions for RNA: ENST00000518146.5

NSMCE2-205, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-205ENST00000518146 ADAMTS12P58397 1594 aa16.48■□□□□ 0.23
NSMCE2-205ENST00000518146 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
NSMCE2-205ENST00000518146 NUP160Q12769 1436 aa16.46■□□□□ 0.23
NSMCE2-205ENST00000518146 WRNQ14191 1432 aaPredicted RBP eCLIP16.44■□□□□ 0.22
NSMCE2-205ENST00000518146 SHROOM2Q13796 1616 aa16.43■□□□□ 0.22
NSMCE2-205ENST00000518146 FHAD1B1AJZ9 1412 aa16.4■□□□□ 0.22
NSMCE2-205ENST00000518146 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
NSMCE2-205ENST00000518146 BIVM-ERCC5R4GMW8 1640 aa16.37■□□□□ 0.21
NSMCE2-205ENST00000518146 ERICH3Q5RHP9 1530 aa16.36■□□□□ 0.21
NSMCE2-205ENST00000518146 KIF13AQ9H1H9 1805 aa16.35■□□□□ 0.21
NSMCE2-205ENST00000518146 PRG4Q92954 1404 aaPredicted RBP16.32■□□□□ 0.2
NSMCE2-205ENST00000518146 SUPT5HO00267 1087 aaKnown RBP16.28■□□□□ 0.2
NSMCE2-205ENST00000518146 RUSC2Q8N2Y8 1516 aa16.25■□□□□ 0.19
NSMCE2-205ENST00000518146 JPH4Q96JJ6 628 aa16.25■□□□□ 0.19
NSMCE2-205ENST00000518146 ABCC10Q5T3U5 1492 aa16.24■□□□□ 0.19
NSMCE2-205ENST00000518146 MAPKBP1O60336 1514 aa16.24■□□□□ 0.19
NSMCE2-205ENST00000518146 FAM69CQ0P6D2 419 aa16.22■□□□□ 0.19
NSMCE2-205ENST00000518146 DIP2BQ9P265 1576 aa16.21■□□□□ 0.18
NSMCE2-205ENST00000518146 NPM1P06748 294 aaKnown RBP eCLIP16.2■□□□□ 0.18
NSMCE2-205ENST00000518146 ADCY10Q96PN6 1610 aa16.19■□□□□ 0.18
NSMCE2-205ENST00000518146 KDM6BO15054 1643 aa16.14■□□□□ 0.17
NSMCE2-205ENST00000518146 KIAA0586Q9BVV6 1533 aa16.12■□□□□ 0.17
NSMCE2-205ENST00000518146 PPP4R3CPQ6ZMV5 832 aa16.11■□□□□ 0.17
NSMCE2-205ENST00000518146 CUL7Q14999 1698 aa16.08■□□□□ 0.16
NSMCE2-205ENST00000518146 TSPOAP1O95153 1857 aa16.08■□□□□ 0.16
NSMCE2-205ENST00000518146 KDM4FA0A1W2PPD8 638 aa16.07■□□□□ 0.16
NSMCE2-205ENST00000518146 IGF1RP08069 1367 aa16.05■□□□□ 0.16
NSMCE2-205ENST00000518146 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
NSMCE2-205ENST00000518146 PTPRGP23470 1445 aa16.02■□□□□ 0.15
NSMCE2-205ENST00000518146 ABCC2Q92887 1545 aa15.99■□□□□ 0.15
NSMCE2-205ENST00000518146 TNIKQ9UKE5 1360 aa15.98■□□□□ 0.15
NSMCE2-205ENST00000518146 CARMIL2Q6F5E8 1435 aa15.97■□□□□ 0.15
NSMCE2-205ENST00000518146 HOXD11P31277 338 aaPredicted RBP15.96■□□□□ 0.15
NSMCE2-205ENST00000518146 PLB1Q6P1J6 1458 aa15.96■□□□□ 0.14
NSMCE2-205ENST00000518146 GLI2P10070 1586 aa15.96■□□□□ 0.14
NSMCE2-205ENST00000518146 TTBK1Q5TCY1 1321 aaPredicted RBP15.95■□□□□ 0.14
NSMCE2-205ENST00000518146 ASXL2Q76L83 1435 aa15.95■□□□□ 0.14
NSMCE2-205ENST00000518146 PPRC1Q5VV67 1664 aaKnown RBP15.95■□□□□ 0.14
NSMCE2-205ENST00000518146 CARMIL1Q5VZK9 1371 aa15.94■□□□□ 0.14
NSMCE2-205ENST00000518146 IQGAP2Q13576 1575 aa15.93■□□□□ 0.14
NSMCE2-205ENST00000518146 UHRF1BP1LA0JNW5 1464 aa15.93■□□□□ 0.14
NSMCE2-205ENST00000518146 ADGRL1O94910 1474 aa15.91■□□□□ 0.14
NSMCE2-205ENST00000518146 UACAQ9BZF9 1416 aa15.89■□□□□ 0.13
NSMCE2-205ENST00000518146 ILDR1Q86SU0 546 aaPredicted RBP15.89■□□□□ 0.13
NSMCE2-205ENST00000518146 DISP1Q96F81 1524 aa15.87■□□□□ 0.13
NSMCE2-205ENST00000518146 MAP3K4Q9Y6R4 1608 aa15.86■□□□□ 0.13
NSMCE2-205ENST00000518146 EPRSP07814 1512 aaKnown RBP15.86■□□□□ 0.13
NSMCE2-205ENST00000518146 CACNB1Q02641 598 aaPredicted RBP15.86■□□□□ 0.13
NSMCE2-205ENST00000518146 CNKSR2Q8WXI2 1034 aa15.86■□□□□ 0.13
NSMCE2-205ENST00000518146 KDM5BQ9UGL1 1544 aa15.85■□□□□ 0.13
NSMCE2-205ENST00000518146 DCAF8L1A6NGE4 600 aa15.85■□□□□ 0.13
NSMCE2-205ENST00000518146 TEX14Q8IWB6 1497 aa15.84■□□□□ 0.13
NSMCE2-205ENST00000518146 COL17A1Q9UMD9 1497 aaPredicted RBP15.84■□□□□ 0.13
NSMCE2-205ENST00000518146 ZCCHC11Q5TAX3 1644 aaKnown RBP15.83■□□□□ 0.12
NSMCE2-205ENST00000518146 UGGT2Q9NYU1 1516 aa15.81■□□□□ 0.12
NSMCE2-205ENST00000518146 KIAA0556O60303 1618 aa15.79■□□□□ 0.12
NSMCE2-205ENST00000518146 HECW2Q9P2P5 1572 aa15.79■□□□□ 0.12
NSMCE2-205ENST00000518146 RAPGEF2Q9Y4G8 1499 aa15.78■□□□□ 0.12
NSMCE2-205ENST00000518146 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.12
NSMCE2-205ENST00000518146 WDR7Q9Y4E6 1490 aa15.77■□□□□ 0.11
NSMCE2-205ENST00000518146 CFAP43Q8NDM7 1665 aa15.7■□□□□ 0.1
NSMCE2-205ENST00000518146 MAGI3Q5TCQ9 1506 aa15.7■□□□□ 0.1
NSMCE2-205ENST00000518146 CD109Q6YHK3 1445 aa15.68■□□□□ 0.1
NSMCE2-205ENST00000518146 CTTNBP2Q8WZ74 1663 aa15.68■□□□□ 0.1
NSMCE2-205ENST00000518146 RNF39Q9H2S5 420 aa15.68■□□□□ 0.1
NSMCE2-205ENST00000518146 GOLGA3Q08378 1498 aa15.67■□□□□ 0.1
NSMCE2-205ENST00000518146 ABCA8O94911 1581 aa15.66■□□□□ 0.1
NSMCE2-205ENST00000518146 KCNH8Q96L42 1107 aa15.63■□□□□ 0.09
NSMCE2-205ENST00000518146 KIF21BO75037 1637 aa15.63■□□□□ 0.09
NSMCE2-205ENST00000518146 ARAP3Q8WWN8 1544 aa15.58■□□□□ 0.09
NSMCE2-205ENST00000518146 PRXQ9BXM0 1461 aa15.53■□□□□ 0.08
NSMCE2-205ENST00000518146 ABCA9Q8IUA7 1624 aa15.53■□□□□ 0.08
NSMCE2-205ENST00000518146 PHLDB1Q86UU1 1377 aa15.51■□□□□ 0.07
NSMCE2-205ENST00000518146 ARID3CA6NKF2 412 aa15.51■□□□□ 0.07
NSMCE2-205ENST00000518146 FAM9AQ8IZU1 332 aaPredicted RBP15.51■□□□□ 0.07
NSMCE2-205ENST00000518146 FBXO41Q8TF61 875 aa15.51■□□□□ 0.07
NSMCE2-205ENST00000518146 ATP10BO94823 1461 aa15.51■□□□□ 0.07
NSMCE2-205ENST00000518146 PTPRMP28827 1452 aa15.51■□□□□ 0.07
NSMCE2-205ENST00000518146 ADAMTSL3P82987 1691 aa15.51■□□□□ 0.07
NSMCE2-205ENST00000518146 NEO1Q92859 1461 aa15.47■□□□□ 0.07
NSMCE2-205ENST00000518146 RAPGEF3O95398 923 aa15.45■□□□□ 0.06
NSMCE2-205ENST00000518146 P3H3Q8IVL6 736 aa15.45■□□□□ 0.06
NSMCE2-205ENST00000518146 BCORL1Q5H9F3 1711 aa15.45■□□□□ 0.06
NSMCE2-205ENST00000518146 FRMPD1Q5SYB0 1578 aa15.45■□□□□ 0.06
NSMCE2-205ENST00000518146 RAPGEF6Q8TEU7 1601 aa15.44■□□□□ 0.06
NSMCE2-205ENST00000518146 C1QBPQ07021 282 aaKnown RBP15.44■□□□□ 0.06
NSMCE2-205ENST00000518146 PCF11O94913 1555 aaKnown RBP15.44■□□□□ 0.06
NSMCE2-205ENST00000518146 SAMD9Q5K651 1589 aa15.44■□□□□ 0.06
NSMCE2-205ENST00000518146 MADDQ8WXG6 1647 aa15.43■□□□□ 0.06
NSMCE2-205ENST00000518146 NCBP3Q53F19 620 aaKnown RBP15.41■□□□□ 0.06
NSMCE2-205ENST00000518146 ARID4BQ4LE39 1312 aaPredicted RBP15.41■□□□□ 0.06
NSMCE2-205ENST00000518146 LMTK3Q96Q04 1460 aa15.4■□□□□ 0.06
NSMCE2-205ENST00000518146 ARHGEF40Q8TER5 1519 aa15.4■□□□□ 0.06
NSMCE2-205ENST00000518146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
NSMCE2-205ENST00000518146 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
NSMCE2-205ENST00000518146 NUP153P49790 1475 aaKnown RBP15.38■□□□□ 0.05
NSMCE2-205ENST00000518146 RIMS1Q86UR5 1692 aaKnown RBP15.36■□□□□ 0.05
NSMCE2-205ENST00000518146 DENND4BO75064 1496 aaPredicted RBP15.35■□□□□ 0.05
NSMCE2-205ENST00000518146 RICTORQ6R327 1708 aa15.35■□□□□ 0.05
NSMCE2-205ENST00000518146 CFAP74Q9C0B2 1584 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms