RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 ADAMTS12P58397 1594 aa18.1■□□□□ 0.49
SH2D4A-202ENST00000518040 FHAD1B1AJZ9 1412 aa18.08■□□□□ 0.49
SH2D4A-202ENST00000518040 POTEDQ86YR6 584 aa18.06■□□□□ 0.48
SH2D4A-202ENST00000518040 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
SH2D4A-202ENST00000518040 ABCC10Q5T3U5 1492 aa18.06■□□□□ 0.48
SH2D4A-202ENST00000518040 NPM1P06748 294 aaKnown RBP eCLIP18.05■□□□□ 0.48
SH2D4A-202ENST00000518040 FAM69CQ0P6D2 419 aa18.05■□□□□ 0.48
SH2D4A-202ENST00000518040 PRG4Q92954 1404 aaPredicted RBP18.03■□□□□ 0.48
SH2D4A-202ENST00000518040 MAPKBP1O60336 1514 aa18■□□□□ 0.47
SH2D4A-202ENST00000518040 ERICH3Q5RHP9 1530 aa18■□□□□ 0.47
SH2D4A-202ENST00000518040 JPH4Q96JJ6 628 aa17.99■□□□□ 0.47
SH2D4A-202ENST00000518040 KDM4FA0A1W2PPD8 638 aa17.99■□□□□ 0.47
SH2D4A-202ENST00000518040 ILDR1Q86SU0 546 aaPredicted RBP17.99■□□□□ 0.47
SH2D4A-202ENST00000518040 KDM6BO15054 1643 aa17.96■□□□□ 0.47
SH2D4A-202ENST00000518040 DIP2BQ9P265 1576 aa17.96■□□□□ 0.47
SH2D4A-202ENST00000518040 TOP2BQ02880 1626 aa17.91■□□□□ 0.46
SH2D4A-202ENST00000518040 BIVM-ERCC5R4GMW8 1640 aa17.91■□□□□ 0.46
SH2D4A-202ENST00000518040 RUSC2Q8N2Y8 1516 aa17.86■□□□□ 0.45
SH2D4A-202ENST00000518040 ADCY10Q96PN6 1610 aa17.86■□□□□ 0.45
SH2D4A-202ENST00000518040 TSPOAP1O95153 1857 aa17.81■□□□□ 0.44
SH2D4A-202ENST00000518040 KIAA0586Q9BVV6 1533 aa17.76■□□□□ 0.43
SH2D4A-202ENST00000518040 ADGRL1O94910 1474 aa17.73■□□□□ 0.43
SH2D4A-202ENST00000518040 GLI2P10070 1586 aa17.7■□□□□ 0.42
SH2D4A-202ENST00000518040 PTPRGP23470 1445 aa17.69■□□□□ 0.42
SH2D4A-202ENST00000518040 PLB1Q6P1J6 1458 aa17.69■□□□□ 0.42
SH2D4A-202ENST00000518040 ABCC2Q92887 1545 aa17.68■□□□□ 0.42
SH2D4A-202ENST00000518040 HECW2Q9P2P5 1572 aa17.65■□□□□ 0.42
SH2D4A-202ENST00000518040 ASXL2Q76L83 1435 aa17.65■□□□□ 0.42
SH2D4A-202ENST00000518040 CARMIL2Q6F5E8 1435 aa17.64■□□□□ 0.41
SH2D4A-202ENST00000518040 TNIKQ9UKE5 1360 aa17.63■□□□□ 0.41
SH2D4A-202ENST00000518040 PPRC1Q5VV67 1664 aaKnown RBP17.63■□□□□ 0.41
SH2D4A-202ENST00000518040 CUL7Q14999 1698 aa17.63■□□□□ 0.41
SH2D4A-202ENST00000518040 SUPT5HO00267 1087 aaKnown RBP17.61■□□□□ 0.41
SH2D4A-202ENST00000518040 TEX14Q8IWB6 1497 aa17.61■□□□□ 0.41
SH2D4A-202ENST00000518040 IGF1RP08069 1367 aa17.6■□□□□ 0.41
SH2D4A-202ENST00000518040 UHRF1BP1LA0JNW5 1464 aa17.6■□□□□ 0.41
SH2D4A-202ENST00000518040 KIF27Q86VH2 1401 aa17.58■□□□□ 0.4
SH2D4A-202ENST00000518040 COL17A1Q9UMD9 1497 aaPredicted RBP17.55■□□□□ 0.4
SH2D4A-202ENST00000518040 TTBK1Q5TCY1 1321 aaPredicted RBP17.55■□□□□ 0.4
SH2D4A-202ENST00000518040 MAP3K4Q9Y6R4 1608 aa17.55■□□□□ 0.4
SH2D4A-202ENST00000518040 UACAQ9BZF9 1416 aa17.54■□□□□ 0.4
SH2D4A-202ENST00000518040 EPRSP07814 1512 aaKnown RBP17.54■□□□□ 0.4
SH2D4A-202ENST00000518040 FBXO41Q8TF61 875 aa17.52■□□□□ 0.4
SH2D4A-202ENST00000518040 KDM5BQ9UGL1 1544 aa17.51■□□□□ 0.39
SH2D4A-202ENST00000518040 CARMIL1Q5VZK9 1371 aa17.49■□□□□ 0.39
SH2D4A-202ENST00000518040 IQGAP2Q13576 1575 aa17.49■□□□□ 0.39
SH2D4A-202ENST00000518040 DISP1Q96F81 1524 aa17.42■□□□□ 0.38
SH2D4A-202ENST00000518040 ZCCHC11Q5TAX3 1644 aaKnown RBP17.42■□□□□ 0.38
SH2D4A-202ENST00000518040 WDR7Q9Y4E6 1490 aa17.4■□□□□ 0.38
SH2D4A-202ENST00000518040 MAGI3Q5TCQ9 1506 aa17.39■□□□□ 0.37
SH2D4A-202ENST00000518040 UGGT2Q9NYU1 1516 aa17.37■□□□□ 0.37
SH2D4A-202ENST00000518040 CD109Q6YHK3 1445 aa17.36■□□□□ 0.37
SH2D4A-202ENST00000518040 CFAP43Q8NDM7 1665 aa17.35■□□□□ 0.37
SH2D4A-202ENST00000518040 KIAA0556O60303 1618 aa17.33■□□□□ 0.36
SH2D4A-202ENST00000518040 KIF21BO75037 1637 aa17.29■□□□□ 0.36
SH2D4A-202ENST00000518040 RAPGEF2Q9Y4G8 1499 aa17.28■□□□□ 0.36
SH2D4A-202ENST00000518040 ARAP3Q8WWN8 1544 aa17.27■□□□□ 0.36
SH2D4A-202ENST00000518040 KCNH8Q96L42 1107 aa17.26■□□□□ 0.35
SH2D4A-202ENST00000518040 PTPRMP28827 1452 aa17.26■□□□□ 0.35
SH2D4A-202ENST00000518040 PHLDB1Q86UU1 1377 aa17.25■□□□□ 0.35
SH2D4A-202ENST00000518040 GOLGA3Q08378 1498 aa17.23■□□□□ 0.35
SH2D4A-202ENST00000518040 ADAMTSL3P82987 1691 aa17.22■□□□□ 0.35
SH2D4A-202ENST00000518040 ABCA8O94911 1581 aa17.2■□□□□ 0.34
SH2D4A-202ENST00000518040 FAM9AQ8IZU1 332 aaPredicted RBP17.2■□□□□ 0.34
SH2D4A-202ENST00000518040 PCF11O94913 1555 aaKnown RBP17.19■□□□□ 0.34
SH2D4A-202ENST00000518040 LMTK3Q96Q04 1460 aa17.18■□□□□ 0.34
SH2D4A-202ENST00000518040 CTTNBP2Q8WZ74 1663 aa17.13■□□□□ 0.33
SH2D4A-202ENST00000518040 BCORL1Q5H9F3 1711 aa17.13■□□□□ 0.33
SH2D4A-202ENST00000518040 NEO1Q92859 1461 aa17.11■□□□□ 0.33
SH2D4A-202ENST00000518040 ARID4BQ4LE39 1312 aaPredicted RBP17.11■□□□□ 0.33
SH2D4A-202ENST00000518040 ABCA9Q8IUA7 1624 aa17.11■□□□□ 0.33
SH2D4A-202ENST00000518040 MADDQ8WXG6 1647 aa17.09■□□□□ 0.33
SH2D4A-202ENST00000518040 RAPGEF3O95398 923 aa17.09■□□□□ 0.33
SH2D4A-202ENST00000518040 CERKQ8TCT0 537 aa17.06■□□□□ 0.32
SH2D4A-202ENST00000518040 ATP10BO94823 1461 aa17.05■□□□□ 0.32
SH2D4A-202ENST00000518040 MAPK8IP2Q13387 824 aaPredicted RBP17.04■□□□□ 0.32
SH2D4A-202ENST00000518040 SCAF1Q9H7N4 1312 aaKnown RBP17.04■□□□□ 0.32
SH2D4A-202ENST00000518040 POGZQ7Z3K3 1410 aa17.02■□□□□ 0.32
SH2D4A-202ENST00000518040 SOCS7O14512 581 aa17.01■□□□□ 0.31
SH2D4A-202ENST00000518040 RIMS1Q86UR5 1692 aaKnown RBP17.01■□□□□ 0.31
SH2D4A-202ENST00000518040 FRMPD1Q5SYB0 1578 aa17.01■□□□□ 0.31
SH2D4A-202ENST00000518040 ARHGEF40Q8TER5 1519 aa17■□□□□ 0.31
SH2D4A-202ENST00000518040 HSPA2P54652 639 aa17■□□□□ 0.31
SH2D4A-202ENST00000518040 DISP3Q9P2K9 1392 aa16.98■□□□□ 0.31
SH2D4A-202ENST00000518040 ARID3CA6NKF2 412 aa16.98■□□□□ 0.31
SH2D4A-202ENST00000518040 FANCAO15360 1455 aa16.98■□□□□ 0.31
SH2D4A-202ENST00000518040 DENND4BO75064 1496 aaPredicted RBP16.97■□□□□ 0.31
SH2D4A-202ENST00000518040 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
SH2D4A-202ENST00000518040 AKNAQ7Z591 1439 aa16.96■□□□□ 0.31
SH2D4A-202ENST00000518040 FHOD3Q2V2M9 1422 aa16.95■□□□□ 0.3
SH2D4A-202ENST00000518040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.94■□□□□ 0.3
SH2D4A-202ENST00000518040 HNRNPUL2Q1KMD3 747 aaKnown RBP16.94■□□□□ 0.3
SH2D4A-202ENST00000518040 PRXQ9BXM0 1461 aa16.94■□□□□ 0.3
SH2D4A-202ENST00000518040 CFAP74Q9C0B2 1584 aa16.92■□□□□ 0.3
SH2D4A-202ENST00000518040 RAPGEF6Q8TEU7 1601 aa16.92■□□□□ 0.3
SH2D4A-202ENST00000518040 RICTORQ6R327 1708 aa16.92■□□□□ 0.3
SH2D4A-202ENST00000518040 ILDR2Q71H61 639 aa16.91■□□□□ 0.3
SH2D4A-202ENST00000518040 MAGI2Q86UL8 1455 aa16.91■□□□□ 0.3
SH2D4A-202ENST00000518040 EFCAB5A4FU69 1503 aa16.91■□□□□ 0.3
SH2D4A-202ENST00000518040 P3H3Q8IVL6 736 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms