RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 AQRO60306 1485 aaKnown RBP eCLIP18.27■□□□□ 0.52
SPIDR-203ENST00000517693 EIF4G3O43432 1585 aaKnown RBP18.27■□□□□ 0.51
SPIDR-203ENST00000517693 RANGAP1P46060 587 aaPredicted RBP18.26■□□□□ 0.51
SPIDR-203ENST00000517693 ZNF608Q9ULD9 1512 aaPredicted RBP18.23■□□□□ 0.51
SPIDR-203ENST00000517693 MAGI1Q96QZ7 1491 aaPredicted RBP18.22■□□□□ 0.51
SPIDR-203ENST00000517693 SNAPC4Q5SXM2 1469 aa18.17■□□□□ 0.5
SPIDR-203ENST00000517693 MAP3K1Q13233 1512 aa18.14■□□□□ 0.49
SPIDR-203ENST00000517693 SAMD9Q5K651 1589 aa18.14■□□□□ 0.49
SPIDR-203ENST00000517693 IQGAP2Q13576 1575 aa18.13■□□□□ 0.49
SPIDR-203ENST00000517693 PPARGC1BQ86YN6 1023 aaKnown RBP18.13■□□□□ 0.49
SPIDR-203ENST00000517693 FMN1Q68DA7 1419 aa18.13■□□□□ 0.49
SPIDR-203ENST00000517693 SYNJ2O15056 1496 aa18.12■□□□□ 0.49
SPIDR-203ENST00000517693 GRIN2AQ12879 1464 aa18.11■□□□□ 0.49
SPIDR-203ENST00000517693 FYCO1Q9BQS8 1478 aa18.09■□□□□ 0.49
SPIDR-203ENST00000517693 KIAA0586Q9BVV6 1533 aa18.07■□□□□ 0.48
SPIDR-203ENST00000517693 FHOD3Q2V2M9 1422 aa18.07■□□□□ 0.48
SPIDR-203ENST00000517693 CASKIN1Q8WXD9 1431 aa18.05■□□□□ 0.48
SPIDR-203ENST00000517693 UGGT2Q9NYU1 1516 aa18.05■□□□□ 0.48
SPIDR-203ENST00000517693 PCF11O94913 1555 aaKnown RBP18.04■□□□□ 0.48
SPIDR-203ENST00000517693 TIAM1Q13009 1591 aa18.04■□□□□ 0.48
SPIDR-203ENST00000517693 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
SPIDR-203ENST00000517693 CFAP43Q8NDM7 1665 aa18.03■□□□□ 0.48
SPIDR-203ENST00000517693 HRCP23327 699 aa18.01■□□□□ 0.47
SPIDR-203ENST00000517693 TTBK1Q5TCY1 1321 aaPredicted RBP18■□□□□ 0.47
SPIDR-203ENST00000517693 P3H3Q8IVL6 736 aa17.98■□□□□ 0.47
SPIDR-203ENST00000517693 NUP160Q12769 1436 aa17.97■□□□□ 0.47
SPIDR-203ENST00000517693 CEP170Q5SW79 1584 aa17.95■□□□□ 0.46
SPIDR-203ENST00000517693 LRRC9Q6ZRR7 1453 aa17.94■□□□□ 0.46
SPIDR-203ENST00000517693 KIAA0556O60303 1618 aa17.93■□□□□ 0.46
SPIDR-203ENST00000517693 CCDC18Q5T9S5 1454 aa17.92■□□□□ 0.46
SPIDR-203ENST00000517693 HECW1Q76N89 1606 aa17.92■□□□□ 0.46
SPIDR-203ENST00000517693 ZEB1P37275 1124 aaPredicted RBP17.91■□□□□ 0.46
SPIDR-203ENST00000517693 KANK4Q5T7N3 995 aaPredicted RBP17.91■□□□□ 0.46
SPIDR-203ENST00000517693 FBLN2P98095 1184 aa17.9■□□□□ 0.46
SPIDR-203ENST00000517693 CARMIL2Q6F5E8 1435 aa17.9■□□□□ 0.46
SPIDR-203ENST00000517693 RRBP1Q9P2E9 1410 aaKnown RBP17.89■□□□□ 0.45
SPIDR-203ENST00000517693 ATP1B4Q9UN42 357 aaPredicted RBP17.88■□□□□ 0.45
SPIDR-203ENST00000517693 DISP1Q96F81 1524 aa17.87■□□□□ 0.45
SPIDR-203ENST00000517693 EHBP1L1Q8N3D4 1523 aa17.83■□□□□ 0.44
SPIDR-203ENST00000517693 MTUS2Q5JR59 1369 aa17.82■□□□□ 0.44
SPIDR-203ENST00000517693 CCNB3Q8WWL7 1395 aa17.82■□□□□ 0.44
SPIDR-203ENST00000517693 CHD1O14646 1710 aa17.82■□□□□ 0.44
SPIDR-203ENST00000517693 JPH4Q96JJ6 628 aa17.79■□□□□ 0.44
SPIDR-203ENST00000517693 RAPGEF6Q8TEU7 1601 aa17.78■□□□□ 0.44
SPIDR-203ENST00000517693 EPRSP07814 1512 aaKnown RBP17.77■□□□□ 0.44
SPIDR-203ENST00000517693 LRRIQ1Q96JM4 1722 aa17.77■□□□□ 0.44
SPIDR-203ENST00000517693 SUPT6HQ7KZ85 1726 aaKnown RBP17.77■□□□□ 0.44
SPIDR-203ENST00000517693 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.74■□□□□ 0.43
SPIDR-203ENST00000517693 PHLDB1Q86UU1 1377 aa17.72■□□□□ 0.43
SPIDR-203ENST00000517693 HNRNPUL2Q1KMD3 747 aaKnown RBP17.72■□□□□ 0.43
SPIDR-203ENST00000517693 SHROOM2Q13796 1616 aa17.72■□□□□ 0.43
SPIDR-203ENST00000517693 CCER1Q8TC90 406 aaPredicted RBP17.71■□□□□ 0.43
SPIDR-203ENST00000517693 CDK11AQ9UQ88 783 aaPredicted RBP17.7■□□□□ 0.42
SPIDR-203ENST00000517693 NUP153P49790 1475 aaKnown RBP17.69■□□□□ 0.42
SPIDR-203ENST00000517693 PRG4Q92954 1404 aaPredicted RBP17.68■□□□□ 0.42
SPIDR-203ENST00000517693 NCOA2Q15596 1464 aa17.68■□□□□ 0.42
SPIDR-203ENST00000517693 ARHGEF11O15085 1522 aa17.66■□□□□ 0.42
SPIDR-203ENST00000517693 CDK13Q14004 1512 aaKnown RBP17.66■□□□□ 0.42
SPIDR-203ENST00000517693 MYOM3Q5VTT5 1437 aa17.66■□□□□ 0.42
SPIDR-203ENST00000517693 FGD6Q6ZV73 1430 aa17.66■□□□□ 0.42
SPIDR-203ENST00000517693 ABCA8O94911 1581 aa17.65■□□□□ 0.42
SPIDR-203ENST00000517693 CLASP1Q7Z460 1538 aa17.65■□□□□ 0.42
SPIDR-203ENST00000517693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.64■□□□□ 0.41
SPIDR-203ENST00000517693 MAGI3Q5TCQ9 1506 aa17.63■□□□□ 0.41
SPIDR-203ENST00000517693 PLB1Q6P1J6 1458 aa17.62■□□□□ 0.41
SPIDR-203ENST00000517693 PTPRGP23470 1445 aa17.62■□□□□ 0.41
SPIDR-203ENST00000517693 FAM50AQ14320 339 aaKnown RBP17.6■□□□□ 0.41
SPIDR-203ENST00000517693 MIA2Q96PC5 1412 aa17.6■□□□□ 0.41
SPIDR-203ENST00000517693 TROQ12816 1431 aaPredicted RBP17.58■□□□□ 0.41
SPIDR-203ENST00000517693 ADCY10Q96PN6 1610 aa17.56■□□□□ 0.4
SPIDR-203ENST00000517693 CLSPNQ9HAW4 1339 aa17.56■□□□□ 0.4
SPIDR-203ENST00000517693 PTPN23Q9H3S7 1636 aa17.56■□□□□ 0.4
SPIDR-203ENST00000517693 TCOF1Q13428 1488 aaKnown RBP17.55■□□□□ 0.4
SPIDR-203ENST00000517693 UACAQ9BZF9 1416 aa17.53■□□□□ 0.4
SPIDR-203ENST00000517693 ITSN2Q9NZM3 1697 aa17.53■□□□□ 0.4
SPIDR-203ENST00000517693 SETD5Q9C0A6 1442 aa17.51■□□□□ 0.39
SPIDR-203ENST00000517693 KIF14Q15058 1648 aa17.51■□□□□ 0.39
SPIDR-203ENST00000517693 ITGAEP38570 1179 aa17.51■□□□□ 0.39
SPIDR-203ENST00000517693 ATP10BO94823 1461 aa17.5■□□□□ 0.39
SPIDR-203ENST00000517693 ABCC2Q92887 1545 aa17.49■□□□□ 0.39
SPIDR-203ENST00000517693 PLEKHD1A6NEE1 506 aa17.49■□□□□ 0.39
SPIDR-203ENST00000517693 ARID3CA6NKF2 412 aa17.49■□□□□ 0.39
SPIDR-203ENST00000517693 UHRF1BP1LA0JNW5 1464 aa17.46■□□□□ 0.39
SPIDR-203ENST00000517693 RAB3GAP2Q9H2M9 1393 aa17.45■□□□□ 0.38
SPIDR-203ENST00000517693 AKNAQ7Z591 1439 aa17.45■□□□□ 0.38
SPIDR-203ENST00000517693 ERCC6L2Q5T890 1561 aa17.44■□□□□ 0.38
SPIDR-203ENST00000517693 DHX57Q6P158 1386 aaKnown RBP17.43■□□□□ 0.38
SPIDR-203ENST00000517693 ACIN1Q9UKV3 1341 aaKnown RBP17.43■□□□□ 0.38
SPIDR-203ENST00000517693 HFM1A2PYH4 1435 aa17.43■□□□□ 0.38
SPIDR-203ENST00000517693 OSCARQ8IYS5 282 aa17.42■□□□□ 0.38
SPIDR-203ENST00000517693 RIMBP3CA6NJZ7 1639 aa17.41■□□□□ 0.38
SPIDR-203ENST00000517693 RIMBP3BA6NNM3 1639 aa17.41■□□□□ 0.38
SPIDR-203ENST00000517693 RIMBP3Q9UFD9 1639 aa17.41■□□□□ 0.38
SPIDR-203ENST00000517693 GPATCH8Q9UKJ3 1502 aaKnown RBP17.39■□□□□ 0.37
SPIDR-203ENST00000517693 DNMT1P26358 1616 aaKnown RBP17.38■□□□□ 0.37
SPIDR-203ENST00000517693 CFDP1Q9UEE9 299 aaPredicted RBP17.37■□□□□ 0.37
SPIDR-203ENST00000517693 ABCC10Q5T3U5 1492 aa17.37■□□□□ 0.37
SPIDR-203ENST00000517693 GCC2Q8IWJ2 1684 aa17.36■□□□□ 0.37
SPIDR-203ENST00000517693 KDM5BQ9UGL1 1544 aa17.36■□□□□ 0.37
SPIDR-203ENST00000517693 CAMSAP2Q08AD1 1489 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms