RNA–Protein interactions for RNA: ENST00000517373.1

EBF1-203, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 2,277 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-203ENST00000517373 ATAD2BQ9ULI0 1458 aa10.77□□□□□ -0.68
EBF1-203ENST00000517373 FKBP8Q14318 412 aa10.76□□□□□ -0.69
EBF1-203ENST00000517373 HOMEZQ8IX15 550 aa10.76□□□□□ -0.69
EBF1-203ENST00000517373 AAMPQ13685 434 aa10.75□□□□□ -0.69
EBF1-203ENST00000517373 PPP4R3CPQ6ZMV5 832 aa10.75□□□□□ -0.69
EBF1-203ENST00000517373 RTL5Q5HYW3 569 aaPredicted RBP10.75□□□□□ -0.69
EBF1-203ENST00000517373 CC2D2AQ9P2K1 1620 aa10.75□□□□□ -0.69
EBF1-203ENST00000517373 CDK11AQ9UQ88 783 aaPredicted RBP10.73□□□□□ -0.69
EBF1-203ENST00000517373 NOP58Q9Y2X3 529 aaKnown RBP10.73□□□□□ -0.69
EBF1-203ENST00000517373 VSIG10Q8N0Z9 540 aa10.72□□□□□ -0.69
EBF1-203ENST00000517373 WASHC2CQ9Y4E1 1318 aa10.72□□□□□ -0.69
EBF1-203ENST00000517373 TAOK2Q9UL54 1235 aa10.71□□□□□ -0.69
EBF1-203ENST00000517373 WASHC2AQ641Q2 1341 aa10.7□□□□□ -0.7
EBF1-203ENST00000517373 BCANQ96GW7 911 aa10.7□□□□□ -0.7
EBF1-203ENST00000517373 TAF7LQ5H9L4 462 aa10.69□□□□□ -0.7
EBF1-203ENST00000517373 NCAPD3P42695 1498 aa10.68□□□□□ -0.7
EBF1-203ENST00000517373 RBM10P98175 930 aaKnown RBP10.68□□□□□ -0.7
EBF1-203ENST00000517373 USP35Q9P2H5 1018 aa10.68□□□□□ -0.7
EBF1-203ENST00000517373 BAZ1BQ9UIG0 1483 aaKnown RBP10.67□□□□□ -0.7
EBF1-203ENST00000517373 SMARCA2P51531 1590 aa10.66□□□□□ -0.7
EBF1-203ENST00000517373 PEG3Q9GZU2 1588 aa10.66□□□□□ -0.7
EBF1-203ENST00000517373 NBR1Q14596 966 aa10.64□□□□□ -0.71
EBF1-203ENST00000517373 CCDC88BA6NC98 1476 aa10.63□□□□□ -0.71
EBF1-203ENST00000517373 TOP2AP11388 1531 aaKnown RBP10.62□□□□□ -0.71
EBF1-203ENST00000517373 RRP9O43818 475 aaKnown RBP10.62□□□□□ -0.71
EBF1-203ENST00000517373 HMGXB3Q12766 1538 aa10.6□□□□□ -0.71
EBF1-203ENST00000517373 FAM43AQ8N2R8 423 aa10.6□□□□□ -0.71
EBF1-203ENST00000517373 BCL11BQ9C0K0 894 aaPredicted RBP10.6□□□□□ -0.71
EBF1-203ENST00000517373 A0A0U1RQG5 324 aaPredicted RBP10.6□□□□□ -0.71
EBF1-203ENST00000517373 ITGAEP38570 1179 aa10.56□□□□□ -0.72
EBF1-203ENST00000517373 ZNF326Q5BKZ1 582 aaKnown RBP10.56□□□□□ -0.72
EBF1-203ENST00000517373 WRNQ14191 1432 aaPredicted RBP eCLIP10.55□□□□□ -0.72
EBF1-203ENST00000517373 PAK3O75914 559 aaPredicted RBP10.54□□□□□ -0.72
EBF1-203ENST00000517373 TPRNQ4KMQ1 711 aa10.53□□□□□ -0.72
EBF1-203ENST00000517373 IPO9Q96P70 1041 aaKnown RBP10.53□□□□□ -0.72
EBF1-203ENST00000517373 HSP90AA2PQ14568 343 aaPredicted RBP10.53□□□□□ -0.72
EBF1-203ENST00000517373 SLC4A1APQ9BWU0 796 aaKnown RBP10.52□□□□□ -0.73
EBF1-203ENST00000517373 RSPH4AQ5TD94 716 aa10.5□□□□□ -0.73
EBF1-203ENST00000517373 CENPJQ9HC77 1338 aaPredicted RBP10.49□□□□□ -0.73
EBF1-203ENST00000517373 ZBTB47Q9UFB7 747 aaPredicted RBP10.49□□□□□ -0.73
EBF1-203ENST00000517373 NEFMP07197 916 aa10.48□□□□□ -0.73
EBF1-203ENST00000517373 ANP32AP39687 249 aaKnown RBP10.48□□□□□ -0.73
EBF1-203ENST00000517373 BRPF3Q9ULD4 1205 aa10.48□□□□□ -0.73
EBF1-203ENST00000517373 NESP48681 1621 aa10.48□□□□□ -0.73
EBF1-203ENST00000517373 CALD1Q05682 793 aaKnown RBP10.47□□□□□ -0.73
EBF1-203ENST00000517373 PPM1GO15355 546 aaPredicted RBP10.46□□□□□ -0.74
EBF1-203ENST00000517373 PPP4R2Q9NY27 417 aa10.45□□□□□ -0.74
EBF1-203ENST00000517373 GSE1Q14687 1217 aa10.44□□□□□ -0.74
EBF1-203ENST00000517373 CADPSQ9ULU8 1353 aa10.44□□□□□ -0.74
EBF1-203ENST00000517373 NPM3O75607 178 aaKnown RBP10.43□□□□□ -0.74
EBF1-203ENST00000517373 HSP90AA1P07900 732 aaKnown RBP10.42□□□□□ -0.74
EBF1-203ENST00000517373 NPM2Q86SE8 214 aaKnown RBP10.42□□□□□ -0.74
EBF1-203ENST00000517373 PRDM4Q9UKN5 801 aa10.41□□□□□ -0.74
EBF1-203ENST00000517373 BRD2P25440 801 aaKnown RBP10.4□□□□□ -0.74
EBF1-203ENST00000517373 CFTRP13569 1480 aa10.4□□□□□ -0.74
EBF1-203ENST00000517373 CCER2I3L3R5 266 aa10.4□□□□□ -0.75
EBF1-203ENST00000517373 EEA1Q15075 1411 aa10.4□□□□□ -0.75
EBF1-203ENST00000517373 CNKSR2Q8WXI2 1034 aa10.39□□□□□ -0.75
EBF1-203ENST00000517373 NAP1L2Q9ULW6 460 aaPredicted RBP10.38□□□□□ -0.75
EBF1-203ENST00000517373 IPO4Q8TEX9 1081 aaKnown RBP10.37□□□□□ -0.75
EBF1-203ENST00000517373 NAP1L5Q96NT1 182 aaPredicted RBP10.36□□□□□ -0.75
EBF1-203ENST00000517373 ABCC8Q09428 1581 aa10.36□□□□□ -0.75
EBF1-203ENST00000517373 NCLP19338 710 aaKnown RBP10.35□□□□□ -0.75
EBF1-203ENST00000517373 PDCL3Q9H2J4 239 aa10.34□□□□□ -0.75
EBF1-203ENST00000517373 LAMC3Q9Y6N6 1575 aa10.34□□□□□ -0.75
EBF1-203ENST00000517373 KCNH8Q96L42 1107 aa10.33□□□□□ -0.76
EBF1-203ENST00000517373 C14orf37Q86TY3 774 aa10.32□□□□□ -0.76
EBF1-203ENST00000517373 BBXQ8WY36 941 aaPredicted RBP10.31□□□□□ -0.76
EBF1-203ENST00000517373 FANCD2Q9BXW9 1451 aa10.3□□□□□ -0.76
EBF1-203ENST00000517373 GTF2E1P29083 439 aaPredicted RBP10.3□□□□□ -0.76
EBF1-203ENST00000517373 CANXP27824 592 aaKnown RBP10.29□□□□□ -0.76
EBF1-203ENST00000517373 PAXIP1Q6ZW49 1069 aaPredicted RBP10.28□□□□□ -0.76
EBF1-203ENST00000517373 CNGB1Q14028 1251 aaPredicted RBP10.27□□□□□ -0.76
EBF1-203ENST00000517373 PDS5BQ9NTI5 1447 aa10.27□□□□□ -0.77
EBF1-203ENST00000517373 PRDM2Q13029 1718 aa10.27□□□□□ -0.77
EBF1-203ENST00000517373 CLCN1P35523 988 aa10.27□□□□□ -0.77
EBF1-203ENST00000517373 PNNQ9H307 717 aaKnown RBP10.27□□□□□ -0.77
EBF1-203ENST00000517373 FRAT1Q92837 279 aaPredicted RBP10.26□□□□□ -0.77
EBF1-203ENST00000517373 STAC3Q96MF2 364 aa10.26□□□□□ -0.77
EBF1-203ENST00000517373 PLCB2Q00722 1185 aa10.25□□□□□ -0.77
EBF1-203ENST00000517373 TPM2P07951 284 aa10.24□□□□□ -0.77
EBF1-203ENST00000517373 RRAGDQ9NQL2 400 aaPredicted RBP10.24□□□□□ -0.77
EBF1-203ENST00000517373 CHRM1P11229 460 aaPredicted RBP10.23□□□□□ -0.77
EBF1-203ENST00000517373 RGS3P49796 1198 aa10.23□□□□□ -0.77
EBF1-203ENST00000517373 TEX2Q8IWB9 1127 aa10.23□□□□□ -0.77
EBF1-203ENST00000517373 CHMP4AQ9BY43 222 aa10.23□□□□□ -0.77
EBF1-203ENST00000517373 CHMP4BQ9H444 224 aaKnown RBP10.23□□□□□ -0.77
EBF1-203ENST00000517373 ARID4BQ4LE39 1312 aaPredicted RBP10.23□□□□□ -0.77
EBF1-203ENST00000517373 CUX1P39880 1505 aa10.22□□□□□ -0.77
EBF1-203ENST00000517373 SMAP1Q8IYB5 467 aaPredicted RBP10.22□□□□□ -0.77
EBF1-203ENST00000517373 BCCIPQ9P287 314 aaKnown RBP eCLIP10.22□□□□□ -0.77
EBF1-203ENST00000517373 ERCC6Q03468 1493 aa10.22□□□□□ -0.77
EBF1-203ENST00000517373 SYNJ1O43426 1573 aa10.22□□□□□ -0.77
EBF1-203ENST00000517373 CEP164Q9UPV0 1460 aa10.22□□□□□ -0.77
EBF1-203ENST00000517373 MAP7D2Q96T17 732 aa10.22□□□□□ -0.77
EBF1-203ENST00000517373 VGFO15240 615 aaPredicted RBP10.21□□□□□ -0.77
EBF1-203ENST00000517373 FTSJ3Q8IY81 847 aaKnown RBP10.21□□□□□ -0.77
EBF1-203ENST00000517373 TRIM52Q96A61 297 aa10.21□□□□□ -0.77
EBF1-203ENST00000517373 KIF21AQ7Z4S6 1674 aa10.21□□□□□ -0.78
EBF1-203ENST00000517373 URB2Q14146 1524 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms