RNA–Protein interactions for RNA: ENST00000516227.1

RN7SKP288-201, Transcript of RNA, 7SK small nuclear pseudogene 288, humanhuman

BASIC

Gene RN7SKP288, Length 268 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP288-201ENST00000516227 VPS8Q8N3P4 1428 aa9.28□□□□□ -0.92
RN7SKP288-201ENST00000516227 TTBK1Q5TCY1 1321 aaPredicted RBP9.28□□□□□ -0.92
RN7SKP288-201ENST00000516227 ARAP1Q96P48 1450 aa9.28□□□□□ -0.92
RN7SKP288-201ENST00000516227 ARHGAP35Q9NRY4 1499 aa9.27□□□□□ -0.93
RN7SKP288-201ENST00000516227 LRRIQ1Q96JM4 1722 aa9.26□□□□□ -0.93
RN7SKP288-201ENST00000516227 CFAP43Q8NDM7 1665 aa9.25□□□□□ -0.93
RN7SKP288-201ENST00000516227 EFCAB5A4FU69 1503 aa9.25□□□□□ -0.93
RN7SKP288-201ENST00000516227 IQGAP2Q13576 1575 aa9.24□□□□□ -0.93
RN7SKP288-201ENST00000516227 FHAD1B1AJZ9 1412 aa9.23□□□□□ -0.93
RN7SKP288-201ENST00000516227 SNAPC4Q5SXM2 1469 aa9.23□□□□□ -0.93
RN7SKP288-201ENST00000516227 SAMD9Q5K651 1589 aa9.23□□□□□ -0.93
RN7SKP288-201ENST00000516227 PCF11O94913 1555 aaKnown RBP9.22□□□□□ -0.93
RN7SKP288-201ENST00000516227 P3H3Q8IVL6 736 aa9.21□□□□□ -0.94
RN7SKP288-201ENST00000516227 MAGI1Q96QZ7 1491 aaPredicted RBP9.2□□□□□ -0.94
RN7SKP288-201ENST00000516227 TIAM1Q13009 1591 aa9.18□□□□□ -0.94
RN7SKP288-201ENST00000516227 GRIN2AQ12879 1464 aa9.17□□□□□ -0.94
RN7SKP288-201ENST00000516227 FHOD3Q2V2M9 1422 aa9.17□□□□□ -0.94
RN7SKP288-201ENST00000516227 ATP1B4Q9UN42 357 aaPredicted RBP9.17□□□□□ -0.94
RN7SKP288-201ENST00000516227 CEP170Q5SW79 1584 aa9.16□□□□□ -0.94
RN7SKP288-201ENST00000516227 SYNJ2O15056 1496 aa9.16□□□□□ -0.94
RN7SKP288-201ENST00000516227 FBLN2P98095 1184 aa9.16□□□□□ -0.94
RN7SKP288-201ENST00000516227 CHMP7Q8WUX9 453 aaPredicted RBP9.15□□□□□ -0.94
RN7SKP288-201ENST00000516227 KIAA0556O60303 1618 aa9.14□□□□□ -0.95
RN7SKP288-201ENST00000516227 HECW1Q76N89 1606 aa9.13□□□□□ -0.95
RN7SKP288-201ENST00000516227 UGGT2Q9NYU1 1516 aa9.13□□□□□ -0.95
RN7SKP288-201ENST00000516227 FYCO1Q9BQS8 1478 aa9.13□□□□□ -0.95
RN7SKP288-201ENST00000516227 FMN1Q68DA7 1419 aa9.13□□□□□ -0.95
RN7SKP288-201ENST00000516227 KIAA0586Q9BVV6 1533 aa9.12□□□□□ -0.95
RN7SKP288-201ENST00000516227 SUPT6HQ7KZ85 1726 aaKnown RBP9.12□□□□□ -0.95
RN7SKP288-201ENST00000516227 MAP3K1Q13233 1512 aa9.11□□□□□ -0.95
RN7SKP288-201ENST00000516227 RAPGEF6Q8TEU7 1601 aa9.11□□□□□ -0.95
RN7SKP288-201ENST00000516227 CASKIN1Q8WXD9 1431 aa9.1□□□□□ -0.95
RN7SKP288-201ENST00000516227 KANK4Q5T7N3 995 aaPredicted RBP9.08□□□□□ -0.96
RN7SKP288-201ENST00000516227 HRCP23327 699 aa9.07□□□□□ -0.96
RN7SKP288-201ENST00000516227 LRRC9Q6ZRR7 1453 aa9.07□□□□□ -0.96
RN7SKP288-201ENST00000516227 NUP160Q12769 1436 aa9.05□□□□□ -0.96
RN7SKP288-201ENST00000516227 DISP1Q96F81 1524 aa9.05□□□□□ -0.96
RN7SKP288-201ENST00000516227 CCDC18Q5T9S5 1454 aa9.05□□□□□ -0.96
RN7SKP288-201ENST00000516227 SHROOM2Q13796 1616 aa9.05□□□□□ -0.96
RN7SKP288-201ENST00000516227 HNRNPUL2Q1KMD3 747 aaKnown RBP9.04□□□□□ -0.96
RN7SKP288-201ENST00000516227 EHBP1L1Q8N3D4 1523 aa9.04□□□□□ -0.96
RN7SKP288-201ENST00000516227 CARMIL2Q6F5E8 1435 aa9.04□□□□□ -0.96
RN7SKP288-201ENST00000516227 MTUS2Q5JR59 1369 aa9.01□□□□□ -0.97
RN7SKP288-201ENST00000516227 CDK13Q14004 1512 aaKnown RBP9.01□□□□□ -0.97
RN7SKP288-201ENST00000516227 ITSN2Q9NZM3 1697 aa9.01□□□□□ -0.97
RN7SKP288-201ENST00000516227 EPRSP07814 1512 aaKnown RBP9□□□□□ -0.97
RN7SKP288-201ENST00000516227 JPH4Q96JJ6 628 aa9□□□□□ -0.97
RN7SKP288-201ENST00000516227 RRBP1Q9P2E9 1410 aaKnown RBP8.99□□□□□ -0.97
RN7SKP288-201ENST00000516227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.99□□□□□ -0.97
RN7SKP288-201ENST00000516227 ZEB1P37275 1124 aaPredicted RBP8.99□□□□□ -0.97
RN7SKP288-201ENST00000516227 CCER1Q8TC90 406 aaPredicted RBP8.99□□□□□ -0.97
RN7SKP288-201ENST00000516227 CDC42BPAQ5VT25 1732 aa8.99□□□□□ -0.97
RN7SKP288-201ENST00000516227 PTPN23Q9H3S7 1636 aa8.98□□□□□ -0.97
RN7SKP288-201ENST00000516227 ARID3CA6NKF2 412 aa8.98□□□□□ -0.97
RN7SKP288-201ENST00000516227 MAGI3Q5TCQ9 1506 aa8.98□□□□□ -0.97
RN7SKP288-201ENST00000516227 ADCY10Q96PN6 1610 aa8.98□□□□□ -0.97
RN7SKP288-201ENST00000516227 PRG4Q92954 1404 aaPredicted RBP8.97□□□□□ -0.97
RN7SKP288-201ENST00000516227 CLASP1Q7Z460 1538 aa8.97□□□□□ -0.97
RN7SKP288-201ENST00000516227 ITGAEP38570 1179 aa8.97□□□□□ -0.97
RN7SKP288-201ENST00000516227 ABCA8O94911 1581 aa8.97□□□□□ -0.97
RN7SKP288-201ENST00000516227 CCNB3Q8WWL7 1395 aa8.97□□□□□ -0.97
RN7SKP288-201ENST00000516227 NCOA2Q15596 1464 aa8.96□□□□□ -0.97
RN7SKP288-201ENST00000516227 FAM50AQ14320 339 aaKnown RBP8.96□□□□□ -0.98
RN7SKP288-201ENST00000516227 NUP153P49790 1475 aaKnown RBP8.96□□□□□ -0.98
RN7SKP288-201ENST00000516227 AEBP2Q6ZN18 517 aaPredicted RBP8.95□□□□□ -0.98
RN7SKP288-201ENST00000516227 PHLDB1Q86UU1 1377 aa8.95□□□□□ -0.98
RN7SKP288-201ENST00000516227 PLB1Q6P1J6 1458 aa8.95□□□□□ -0.98
RN7SKP288-201ENST00000516227 ERCC6L2Q5T890 1561 aa8.95□□□□□ -0.98
RN7SKP288-201ENST00000516227 KIF14Q15058 1648 aa8.94□□□□□ -0.98
RN7SKP288-201ENST00000516227 ADGBQ8N7X0 1667 aa8.94□□□□□ -0.98
RN7SKP288-201ENST00000516227 MYO5CQ9NQX4 1742 aa8.94□□□□□ -0.98
RN7SKP288-201ENST00000516227 CDC42BPBQ9Y5S2 1711 aa8.92□□□□□ -0.98
RN7SKP288-201ENST00000516227 GCC2Q8IWJ2 1684 aa8.92□□□□□ -0.98
RN7SKP288-201ENST00000516227 ZCCHC11Q5TAX3 1644 aaKnown RBP8.92□□□□□ -0.98
RN7SKP288-201ENST00000516227 MYOM3Q5VTT5 1437 aa8.92□□□□□ -0.98
RN7SKP288-201ENST00000516227 FGD6Q6ZV73 1430 aa8.92□□□□□ -0.98
RN7SKP288-201ENST00000516227 CDK11AQ9UQ88 783 aaPredicted RBP8.92□□□□□ -0.98
RN7SKP288-201ENST00000516227 CROCC2H7BZ55 1655 aa8.91□□□□□ -0.98
RN7SKP288-201ENST00000516227 PTPRGP23470 1445 aa8.91□□□□□ -0.98
RN7SKP288-201ENST00000516227 ARHGEF11O15085 1522 aa8.9□□□□□ -0.98
RN7SKP288-201ENST00000516227 TROQ12816 1431 aaPredicted RBP8.88□□□□□ -0.99
RN7SKP288-201ENST00000516227 DNMT1P26358 1616 aaKnown RBP8.87□□□□□ -0.99
RN7SKP288-201ENST00000516227 ABCC2Q92887 1545 aa8.87□□□□□ -0.99
RN7SKP288-201ENST00000516227 ATP10BO94823 1461 aa8.87□□□□□ -0.99
RN7SKP288-201ENST00000516227 PREX2Q70Z35 1606 aa8.87□□□□□ -0.99
RN7SKP288-201ENST00000516227 UACAQ9BZF9 1416 aa8.86□□□□□ -0.99
RN7SKP288-201ENST00000516227 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.86□□□□□ -0.99
RN7SKP288-201ENST00000516227 PLEKHD1A6NEE1 506 aa8.85□□□□□ -0.99
RN7SKP288-201ENST00000516227 SETD5Q9C0A6 1442 aa8.85□□□□□ -0.99
RN7SKP288-201ENST00000516227 TCOF1Q13428 1488 aaKnown RBP8.84□□□□□ -0.99
RN7SKP288-201ENST00000516227 MIA2Q96PC5 1412 aa8.84□□□□□ -0.99
RN7SKP288-201ENST00000516227 RAB3GAP2Q9H2M9 1393 aa8.83□□□□□ -1
RN7SKP288-201ENST00000516227 OSCARQ8IYS5 282 aa8.82□□□□□ -1
RN7SKP288-201ENST00000516227 CAMSAP2Q08AD1 1489 aa8.82□□□□□ -1
RN7SKP288-201ENST00000516227 TTC37Q6PGP7 1564 aa8.82□□□□□ -1
RN7SKP288-201ENST00000516227 ZNF777Q9ULD5 760 aaPredicted RBP8.8□□□□□ -1
RN7SKP288-201ENST00000516227 DHX57Q6P158 1386 aaKnown RBP8.8□□□□□ -1
RN7SKP288-201ENST00000516227 UHRF1BP1LA0JNW5 1464 aa8.8□□□□□ -1
RN7SKP288-201ENST00000516227 GPATCH8Q9UKJ3 1502 aaKnown RBP8.8□□□□□ -1
RN7SKP288-201ENST00000516227 ABCC10Q5T3U5 1492 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms