RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 NPM1P06748 294 aaKnown RBP eCLIP21.68■■□□□ 1.06
CSF1R-208ENST00000515239 MAPKBP1O60336 1514 aa21.65■■□□□ 1.06
CSF1R-208ENST00000515239 ERICH3Q5RHP9 1530 aa21.63■■□□□ 1.05
CSF1R-208ENST00000515239 DIP2BQ9P265 1576 aa21.62■■□□□ 1.05
CSF1R-208ENST00000515239 KDM6BO15054 1643 aa21.59■■□□□ 1.05
CSF1R-208ENST00000515239 TOP2BQ02880 1626 aa21.55■■□□□ 1.04
CSF1R-208ENST00000515239 ADCY10Q96PN6 1610 aa21.55■■□□□ 1.04
CSF1R-208ENST00000515239 BIVM-ERCC5R4GMW8 1640 aa21.53■■□□□ 1.04
CSF1R-208ENST00000515239 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
CSF1R-208ENST00000515239 TSPOAP1O95153 1857 aa21.49■■□□□ 1.03
CSF1R-208ENST00000515239 KIAA0586Q9BVV6 1533 aa21.39■■□□□ 1.01
CSF1R-208ENST00000515239 ADGRL1O94910 1474 aa21.38■■□□□ 1.01
CSF1R-208ENST00000515239 SUPT5HO00267 1087 aaKnown RBP21.34■■□□□ 1.01
CSF1R-208ENST00000515239 PTPRGP23470 1445 aa21.33■■□□□ 1.01
CSF1R-208ENST00000515239 COL17A1Q9UMD9 1497 aaPredicted RBP21.3■■□□□ 1
CSF1R-208ENST00000515239 PPRC1Q5VV67 1664 aaKnown RBP21.3■■□□□ 1
CSF1R-208ENST00000515239 IGF1RP08069 1367 aa21.29■■□□□ 1
CSF1R-208ENST00000515239 GLI2P10070 1586 aa21.28■■□□□ 1
CSF1R-208ENST00000515239 ABCC2Q92887 1545 aa21.28■■□□□ 1
CSF1R-208ENST00000515239 ASXL2Q76L83 1435 aa21.28■■□□□ 1
CSF1R-208ENST00000515239 TTBK1Q5TCY1 1321 aaPredicted RBP21.28■■□□□ 1
CSF1R-208ENST00000515239 HECW2Q9P2P5 1572 aa21.27■■□□□ 1
CSF1R-208ENST00000515239 PLB1Q6P1J6 1458 aa21.26■□□□□ 0.99
CSF1R-208ENST00000515239 TNIKQ9UKE5 1360 aa21.22■□□□□ 0.99
CSF1R-208ENST00000515239 CARMIL2Q6F5E8 1435 aa21.17■□□□□ 0.98
CSF1R-208ENST00000515239 UHRF1BP1LA0JNW5 1464 aa21.17■□□□□ 0.98
CSF1R-208ENST00000515239 EPRSP07814 1512 aaKnown RBP21.14■□□□□ 0.98
CSF1R-208ENST00000515239 CUL7Q14999 1698 aa21.14■□□□□ 0.97
CSF1R-208ENST00000515239 KIF27Q86VH2 1401 aa21.13■□□□□ 0.97
CSF1R-208ENST00000515239 UACAQ9BZF9 1416 aa21.12■□□□□ 0.97
CSF1R-208ENST00000515239 MAP3K4Q9Y6R4 1608 aa21.12■□□□□ 0.97
CSF1R-208ENST00000515239 FBXO41Q8TF61 875 aa21.11■□□□□ 0.97
CSF1R-208ENST00000515239 CARMIL1Q5VZK9 1371 aa21.1■□□□□ 0.97
CSF1R-208ENST00000515239 TEX14Q8IWB6 1497 aa21.09■□□□□ 0.97
CSF1R-208ENST00000515239 KDM5BQ9UGL1 1544 aa21.09■□□□□ 0.97
CSF1R-208ENST00000515239 DISP1Q96F81 1524 aa21.04■□□□□ 0.96
CSF1R-208ENST00000515239 IQGAP2Q13576 1575 aa21.02■□□□□ 0.96
CSF1R-208ENST00000515239 ZCCHC11Q5TAX3 1644 aaKnown RBP20.98■□□□□ 0.95
CSF1R-208ENST00000515239 WDR7Q9Y4E6 1490 aa20.94■□□□□ 0.94
CSF1R-208ENST00000515239 CD109Q6YHK3 1445 aa20.92■□□□□ 0.94
CSF1R-208ENST00000515239 MAGI3Q5TCQ9 1506 aa20.92■□□□□ 0.94
CSF1R-208ENST00000515239 UGGT2Q9NYU1 1516 aa20.91■□□□□ 0.94
CSF1R-208ENST00000515239 KCNH8Q96L42 1107 aa20.89■□□□□ 0.93
CSF1R-208ENST00000515239 KIAA0556O60303 1618 aa20.85■□□□□ 0.93
CSF1R-208ENST00000515239 KIF21BO75037 1637 aa20.85■□□□□ 0.93
CSF1R-208ENST00000515239 CFAP43Q8NDM7 1665 aa20.83■□□□□ 0.92
CSF1R-208ENST00000515239 PTPRMP28827 1452 aa20.8■□□□□ 0.92
CSF1R-208ENST00000515239 RAPGEF2Q9Y4G8 1499 aa20.79■□□□□ 0.92
CSF1R-208ENST00000515239 ARAP3Q8WWN8 1544 aa20.78■□□□□ 0.92
CSF1R-208ENST00000515239 ADAMTSL3P82987 1691 aa20.76■□□□□ 0.91
CSF1R-208ENST00000515239 ABCA8O94911 1581 aa20.73■□□□□ 0.91
CSF1R-208ENST00000515239 RAPGEF3O95398 923 aa20.69■□□□□ 0.9
CSF1R-208ENST00000515239 LMTK3Q96Q04 1460 aa20.68■□□□□ 0.9
CSF1R-208ENST00000515239 PCF11O94913 1555 aaKnown RBP20.68■□□□□ 0.9
CSF1R-208ENST00000515239 PHLDB1Q86UU1 1377 aa20.67■□□□□ 0.9
CSF1R-208ENST00000515239 GOLGA3Q08378 1498 aa20.66■□□□□ 0.9
CSF1R-208ENST00000515239 ARID4BQ4LE39 1312 aaPredicted RBP20.62■□□□□ 0.89
CSF1R-208ENST00000515239 BCORL1Q5H9F3 1711 aa20.61■□□□□ 0.89
CSF1R-208ENST00000515239 ARID3CA6NKF2 412 aa20.61■□□□□ 0.89
CSF1R-208ENST00000515239 HSPA2P54652 639 aa20.61■□□□□ 0.89
CSF1R-208ENST00000515239 ATP10BO94823 1461 aa20.61■□□□□ 0.89
CSF1R-208ENST00000515239 MADDQ8WXG6 1647 aa20.6■□□□□ 0.89
CSF1R-208ENST00000515239 CERKQ8TCT0 537 aa20.59■□□□□ 0.89
CSF1R-208ENST00000515239 CTTNBP2Q8WZ74 1663 aa20.58■□□□□ 0.88
CSF1R-208ENST00000515239 ABCA9Q8IUA7 1624 aa20.57■□□□□ 0.88
CSF1R-208ENST00000515239 ILDR2Q71H61 639 aa20.56■□□□□ 0.88
CSF1R-208ENST00000515239 NEO1Q92859 1461 aa20.56■□□□□ 0.88
CSF1R-208ENST00000515239 FRMPD1Q5SYB0 1578 aa20.52■□□□□ 0.88
CSF1R-208ENST00000515239 SOCS7O14512 581 aa20.51■□□□□ 0.87
CSF1R-208ENST00000515239 P3H3Q8IVL6 736 aa20.51■□□□□ 0.87
CSF1R-208ENST00000515239 FAM9AQ8IZU1 332 aaPredicted RBP20.5■□□□□ 0.87
CSF1R-208ENST00000515239 RIMS1Q86UR5 1692 aaKnown RBP20.49■□□□□ 0.87
CSF1R-208ENST00000515239 PLPPR3Q6T4P5 718 aa20.47■□□□□ 0.87
CSF1R-208ENST00000515239 DISP3Q9P2K9 1392 aa20.46■□□□□ 0.87
CSF1R-208ENST00000515239 PRXQ9BXM0 1461 aa20.43■□□□□ 0.86
CSF1R-208ENST00000515239 ARHGEF40Q8TER5 1519 aa20.43■□□□□ 0.86
CSF1R-208ENST00000515239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.42■□□□□ 0.86
CSF1R-208ENST00000515239 HNRNPUL2Q1KMD3 747 aaKnown RBP20.42■□□□□ 0.86
CSF1R-208ENST00000515239 DENND4BO75064 1496 aaPredicted RBP20.42■□□□□ 0.86
CSF1R-208ENST00000515239 FHOD3Q2V2M9 1422 aa20.39■□□□□ 0.85
CSF1R-208ENST00000515239 POGZQ7Z3K3 1410 aa20.38■□□□□ 0.85
CSF1R-208ENST00000515239 AKNAQ7Z591 1439 aa20.38■□□□□ 0.85
CSF1R-208ENST00000515239 RICTORQ6R327 1708 aa20.38■□□□□ 0.85
CSF1R-208ENST00000515239 FANCAO15360 1455 aa20.36■□□□□ 0.85
CSF1R-208ENST00000515239 SIGLEC1Q9BZZ2 1709 aa20.36■□□□□ 0.85
CSF1R-208ENST00000515239 YEATS2Q9ULM3 1422 aa20.35■□□□□ 0.85
CSF1R-208ENST00000515239 RAPGEF6Q8TEU7 1601 aa20.35■□□□□ 0.85
CSF1R-208ENST00000515239 MLECQ14165 292 aa20.34■□□□□ 0.85
CSF1R-208ENST00000515239 NUP153P49790 1475 aaKnown RBP20.32■□□□□ 0.84
CSF1R-208ENST00000515239 PLEKHD1A6NEE1 506 aa20.32■□□□□ 0.84
CSF1R-208ENST00000515239 ZMYM4Q5VZL5 1548 aa20.31■□□□□ 0.84
CSF1R-208ENST00000515239 SAMD9Q5K651 1589 aa20.29■□□□□ 0.84
CSF1R-208ENST00000515239 ZFYVE16Q7Z3T8 1539 aa20.29■□□□□ 0.84
CSF1R-208ENST00000515239 DMRT2Q9Y5R5 561 aa20.29■□□□□ 0.84
CSF1R-208ENST00000515239 MAGI2Q86UL8 1455 aa20.29■□□□□ 0.84
CSF1R-208ENST00000515239 TTC37Q6PGP7 1564 aa20.29■□□□□ 0.84
CSF1R-208ENST00000515239 CEBPAP49715 358 aaPredicted RBP20.28■□□□□ 0.84
CSF1R-208ENST00000515239 EFCAB5A4FU69 1503 aa20.27■□□□□ 0.83
CSF1R-208ENST00000515239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.25■□□□□ 0.83
CSF1R-208ENST00000515239 FER1L4A9Z1Z3 1794 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms