RNA–Protein interactions for RNA: ENST00000513367.1

SRPK1-213, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-213ENST00000513367 MS4A3Q96HJ5 214 aa14.09□□□□□ -0.15
SRPK1-213ENST00000513367 METRNQ9UJH8 293 aa14.09□□□□□ -0.15
SRPK1-213ENST00000513367 UNC13AQ9UPW8 1703 aa14.07□□□□□ -0.16
SRPK1-213ENST00000513367 ASTLQ6HA08 431 aaPredicted RBP14.06□□□□□ -0.16
SRPK1-213ENST00000513367 CSRNP3Q8WYN3 585 aa14.06□□□□□ -0.16
SRPK1-213ENST00000513367 SPDYE4A6NLX3 237 aa14.05□□□□□ -0.16
SRPK1-213ENST00000513367 ATMINO43313 823 aaPredicted RBP14.05□□□□□ -0.16
SRPK1-213ENST00000513367 NPM1P06748 294 aaKnown RBP eCLIP14.05□□□□□ -0.16
SRPK1-213ENST00000513367 NACADO15069 1562 aa14.05□□□□□ -0.16
SRPK1-213ENST00000513367 LCE2DQ5TA82 110 aaPredicted RBP14.03□□□□□ -0.16
SRPK1-213ENST00000513367 SLC39A7Q92504 469 aa14□□□□□ -0.17
SRPK1-213ENST00000513367 C7P10643 843 aa13.99□□□□□ -0.17
SRPK1-213ENST00000513367 DCAF8L2P0C7V8 631 aa13.97□□□□□ -0.17
SRPK1-213ENST00000513367 PCDH10Q9P2E7 1040 aa13.97□□□□□ -0.17
SRPK1-213ENST00000513367 BICRAQ9NZM4 1560 aa13.96□□□□□ -0.17
SRPK1-213ENST00000513367 CECR2Q9BXF3 1484 aa13.93□□□□□ -0.18
SRPK1-213ENST00000513367 FAM163AQ96GL9 167 aaPredicted RBP13.92□□□□□ -0.18
SRPK1-213ENST00000513367 ATN1P54259 1190 aaPredicted RBP13.91□□□□□ -0.18
SRPK1-213ENST00000513367 MAMSTRQ6ZN01 415 aa13.91□□□□□ -0.18
SRPK1-213ENST00000513367 TSPYL2Q9H2G4 693 aaPredicted RBP13.88□□□□□ -0.19
SRPK1-213ENST00000513367 CC2D2AQ9P2K1 1620 aa13.88□□□□□ -0.19
SRPK1-213ENST00000513367 POTEFA5A3E0 1075 aa13.86□□□□□ -0.19
SRPK1-213ENST00000513367 SCUBE2Q9NQ36 999 aa13.83□□□□□ -0.2
SRPK1-213ENST00000513367 CCDC61Q9Y6R9 512 aa13.83□□□□□ -0.2
SRPK1-213ENST00000513367 TRPC6Q9Y210 931 aa13.82□□□□□ -0.2
SRPK1-213ENST00000513367 KIF12Q96FN5 646 aa13.79□□□□□ -0.2
SRPK1-213ENST00000513367 BMP2KQ9NSY1 1161 aaPredicted RBP13.79□□□□□ -0.2
SRPK1-213ENST00000513367 COLQQ9Y215 455 aaPredicted RBP13.7□□□□□ -0.22
SRPK1-213ENST00000513367 MAP3K13O43283 966 aa13.69□□□□□ -0.22
SRPK1-213ENST00000513367 EIF4G1Q04637 1599 aaKnown RBP13.66□□□□□ -0.22
SRPK1-213ENST00000513367 TIE1P35590 1138 aa13.65□□□□□ -0.22
SRPK1-213ENST00000513367 CDAN1Q8IWY9 1227 aa13.64□□□□□ -0.23
SRPK1-213ENST00000513367 PROM2Q8N271 834 aa13.62□□□□□ -0.23
SRPK1-213ENST00000513367 TTLL13PA6NNM8 815 aa13.61□□□□□ -0.23
SRPK1-213ENST00000513367 RASEFQ8IZ41 740 aa13.61□□□□□ -0.23
SRPK1-213ENST00000513367 SHROOM4Q9ULL8 1493 aa13.6□□□□□ -0.23
SRPK1-213ENST00000513367 SEC24BO95487 1268 aa13.58□□□□□ -0.24
SRPK1-213ENST00000513367 MYO15BQ96JP2 1530 aa13.58□□□□□ -0.24
SRPK1-213ENST00000513367 EHMT2Q96KQ7 1210 aa13.55□□□□□ -0.24
SRPK1-213ENST00000513367 TRIM35Q9UPQ4 493 aa13.52□□□□□ -0.25
SRPK1-213ENST00000513367 CUX2O14529 1486 aa13.5□□□□□ -0.25
SRPK1-213ENST00000513367 ST18O60284 1047 aa13.5□□□□□ -0.25
SRPK1-213ENST00000513367 MIER1Q8N108 512 aa13.47□□□□□ -0.25
SRPK1-213ENST00000513367 SLAIN1Q8ND83 568 aa13.47□□□□□ -0.25
SRPK1-213ENST00000513367 TRIM41Q8WV44 630 aa13.47□□□□□ -0.25
SRPK1-213ENST00000513367 IER5LQ5T953 404 aa13.46□□□□□ -0.25
SRPK1-213ENST00000513367 PCDHB13Q9Y5F0 798 aa13.43□□□□□ -0.26
SRPK1-213ENST00000513367 SCRIBQ14160 1630 aa13.41□□□□□ -0.26
SRPK1-213ENST00000513367 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
SRPK1-213ENST00000513367 IFNL1Q8IU54 200 aa13.38□□□□□ -0.27
SRPK1-213ENST00000513367 SGIP1Q9BQI5 828 aa13.38□□□□□ -0.27
SRPK1-213ENST00000513367 MMRN1Q13201 1228 aa13.35□□□□□ -0.27
SRPK1-213ENST00000513367 ERCC6Q03468 1493 aa13.35□□□□□ -0.27
SRPK1-213ENST00000513367 SPNS2Q8IVW8 549 aa13.33□□□□□ -0.28
SRPK1-213ENST00000513367 TMEM106CQ9BVX2 250 aa13.33□□□□□ -0.28
SRPK1-213ENST00000513367 PLCG2P16885 1265 aa13.31□□□□□ -0.28
SRPK1-213ENST00000513367 NUBP1P53384 320 aa13.31□□□□□ -0.28
SRPK1-213ENST00000513367 IRX5P78411 483 aaPredicted RBP13.3□□□□□ -0.28
SRPK1-213ENST00000513367 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.29
SRPK1-213ENST00000513367 MARVELD3Q96A59 401 aa13.24□□□□□ -0.29
SRPK1-213ENST00000513367 TMEM121BQ9BXQ6 578 aaPredicted RBP13.22□□□□□ -0.29
SRPK1-213ENST00000513367 OCEL1Q9H607 264 aa13.18□□□□□ -0.3
SRPK1-213ENST00000513367 DCAF1Q9Y4B6 1507 aa13.18□□□□□ -0.3
SRPK1-213ENST00000513367 FAM212AQ96EL1 285 aa13.16□□□□□ -0.3
SRPK1-213ENST00000513367 ZCCHC6Q5VYS8 1495 aaKnown RBP13.16□□□□□ -0.3
SRPK1-213ENST00000513367 SNPHO15079 494 aa13.13□□□□□ -0.31
SRPK1-213ENST00000513367 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.13□□□□□ -0.31
SRPK1-213ENST00000513367 ZBTB47Q9UFB7 747 aaPredicted RBP13.12□□□□□ -0.31
SRPK1-213ENST00000513367 PYGBP11216 843 aa13.08□□□□□ -0.32
SRPK1-213ENST00000513367 PCDHB8Q9UN66 801 aa13.08□□□□□ -0.32
SRPK1-213ENST00000513367 NESP48681 1621 aa13.06□□□□□ -0.32
SRPK1-213ENST00000513367 POTEB3A0JP26 581 aa13.06□□□□□ -0.32
SRPK1-213ENST00000513367 POTEBQ6S5H4 581 aa13.06□□□□□ -0.32
SRPK1-213ENST00000513367 KRTAP3-3Q9BYR6 98 aa13.04□□□□□ -0.32
SRPK1-213ENST00000513367 KRTAP3-2Q9BYR7 98 aa13.04□□□□□ -0.32
SRPK1-213ENST00000513367 EMP3P54852 163 aa13.03□□□□□ -0.32
SRPK1-213ENST00000513367 THOC2Q8NI27 1593 aaKnown RBP13.03□□□□□ -0.32
SRPK1-213ENST00000513367 PDCD7Q8N8D1 485 aaKnown RBP13.02□□□□□ -0.33
SRPK1-213ENST00000513367 DCAF8Q5TAQ9 597 aa13.01□□□□□ -0.33
SRPK1-213ENST00000513367 HS3ST6Q96QI5 342 aa12.99□□□□□ -0.33
SRPK1-213ENST00000513367 NCAPD3P42695 1498 aa12.98□□□□□ -0.33
SRPK1-213ENST00000513367 FAM205CA6NFA0 338 aa12.96□□□□□ -0.33
SRPK1-213ENST00000513367 C3orf67Q6ZVT6 689 aa12.96□□□□□ -0.33
SRPK1-213ENST00000513367 SMARCA2P51531 1590 aa12.93□□□□□ -0.34
SRPK1-213ENST00000513367 L3MBTL3Q96JM7 780 aaPredicted RBP12.88□□□□□ -0.35
SRPK1-213ENST00000513367 KIF21AQ7Z4S6 1674 aa12.88□□□□□ -0.35
SRPK1-213ENST00000513367 ATAD2BQ9ULI0 1458 aa12.87□□□□□ -0.35
SRPK1-213ENST00000513367 MKRN3Q13064 507 aaKnown RBP12.85□□□□□ -0.35
SRPK1-213ENST00000513367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.85□□□□□ -0.355e-9■■■□□ 15.3
SRPK1-213ENST00000513367 BAZ1AQ9NRL2 1556 aaPredicted RBP12.84□□□□□ -0.35
SRPK1-213ENST00000513367 GOLGA2Q08379 1002 aa12.82□□□□□ -0.36
SRPK1-213ENST00000513367 HMGXB3Q12766 1538 aa12.81□□□□□ -0.36
SRPK1-213ENST00000513367 LAMC3Q9Y6N6 1575 aa12.81□□□□□ -0.36
SRPK1-213ENST00000513367 DPY19L2Q6NUT2 758 aa12.8□□□□□ -0.36
SRPK1-213ENST00000513367 ZNF467Q7Z7K2 595 aaPredicted RBP12.79□□□□□ -0.36
SRPK1-213ENST00000513367 HOXB3P14651 431 aaPredicted RBP12.78□□□□□ -0.36
SRPK1-213ENST00000513367 FKBP8Q14318 412 aa12.77□□□□□ -0.37
SRPK1-213ENST00000513367 PSEN1P49768 467 aa12.76□□□□□ -0.37
SRPK1-213ENST00000513367 RIMBP3CA6NJZ7 1639 aa12.75□□□□□ -0.37
SRPK1-213ENST00000513367 RIMBP3BA6NNM3 1639 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms