RNA–Protein interactions for RNA: ENST00000513156.5

PTPN20-226, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 913 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-226ENST00000513156 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
PTPN20-226ENST00000513156 ABCA10Q8WWZ4 1543 aa18.28■□□□□ 0.52
PTPN20-226ENST00000513156 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.52
PTPN20-226ENST00000513156 PRG4Q92954 1404 aaPredicted RBP18.23■□□□□ 0.51
PTPN20-226ENST00000513156 ADCY10Q96PN6 1610 aa18.23■□□□□ 0.51
PTPN20-226ENST00000513156 FBXO41Q8TF61 875 aa18.22■□□□□ 0.51
PTPN20-226ENST00000513156 NPM1P06748 294 aaKnown RBP eCLIP18.18■□□□□ 0.5
PTPN20-226ENST00000513156 PPRC1Q5VV67 1664 aaKnown RBP18.15■□□□□ 0.5
PTPN20-226ENST00000513156 FHAD1B1AJZ9 1412 aa18.14■□□□□ 0.49
PTPN20-226ENST00000513156 JPH4Q96JJ6 628 aa18.12■□□□□ 0.49
PTPN20-226ENST00000513156 RUSC2Q8N2Y8 1516 aa18.07■□□□□ 0.48
PTPN20-226ENST00000513156 LMTK3Q96Q04 1460 aa18.04■□□□□ 0.48
PTPN20-226ENST00000513156 COL17A1Q9UMD9 1497 aaPredicted RBP18.03■□□□□ 0.48
PTPN20-226ENST00000513156 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
PTPN20-226ENST00000513156 GLI2P10070 1586 aa17.98■□□□□ 0.47
PTPN20-226ENST00000513156 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
PTPN20-226ENST00000513156 TOP2BQ02880 1626 aa17.94■□□□□ 0.46
PTPN20-226ENST00000513156 MAP3K4Q9Y6R4 1608 aa17.9■□□□□ 0.46
PTPN20-226ENST00000513156 BIVM-ERCC5R4GMW8 1640 aa17.9■□□□□ 0.46
PTPN20-226ENST00000513156 ASXL2Q76L83 1435 aa17.89■□□□□ 0.46
PTPN20-226ENST00000513156 CUL7Q14999 1698 aa17.89■□□□□ 0.45
PTPN20-226ENST00000513156 ILDR2Q71H61 639 aa17.88■□□□□ 0.45
PTPN20-226ENST00000513156 SOCS7O14512 581 aa17.87■□□□□ 0.45
PTPN20-226ENST00000513156 PLB1Q6P1J6 1458 aa17.87■□□□□ 0.45
PTPN20-226ENST00000513156 ABCC2Q92887 1545 aa17.87■□□□□ 0.45
PTPN20-226ENST00000513156 KIAA0586Q9BVV6 1533 aa17.81■□□□□ 0.44
PTPN20-226ENST00000513156 TEX14Q8IWB6 1497 aa17.81■□□□□ 0.44
PTPN20-226ENST00000513156 PTPRGP23470 1445 aa17.8■□□□□ 0.44
PTPN20-226ENST00000513156 KIF21BO75037 1637 aa17.8■□□□□ 0.44
PTPN20-226ENST00000513156 EPRSP07814 1512 aaKnown RBP17.79■□□□□ 0.44
PTPN20-226ENST00000513156 DISP3Q9P2K9 1392 aa17.74■□□□□ 0.43
PTPN20-226ENST00000513156 TTBK1Q5TCY1 1321 aaPredicted RBP17.73■□□□□ 0.43
PTPN20-226ENST00000513156 UHRF1BP1LA0JNW5 1464 aa17.73■□□□□ 0.43
PTPN20-226ENST00000513156 ADAMTSL3P82987 1691 aa17.7■□□□□ 0.42
PTPN20-226ENST00000513156 PTPRMP28827 1452 aa17.69■□□□□ 0.42
PTPN20-226ENST00000513156 PCF11O94913 1555 aaKnown RBP17.69■□□□□ 0.42
PTPN20-226ENST00000513156 TNIKQ9UKE5 1360 aa17.68■□□□□ 0.42
PTPN20-226ENST00000513156 ZCCHC11Q5TAX3 1644 aaKnown RBP17.68■□□□□ 0.42
PTPN20-226ENST00000513156 KDM5BQ9UGL1 1544 aa17.67■□□□□ 0.42
PTPN20-226ENST00000513156 UACAQ9BZF9 1416 aa17.64■□□□□ 0.42
PTPN20-226ENST00000513156 CARMIL2Q6F5E8 1435 aa17.62■□□□□ 0.41
PTPN20-226ENST00000513156 CERKQ8TCT0 537 aa17.6■□□□□ 0.41
PTPN20-226ENST00000513156 CFAP43Q8NDM7 1665 aa17.6■□□□□ 0.41
PTPN20-226ENST00000513156 SPATA31D1Q6ZQQ2 1576 aa17.59■□□□□ 0.41
PTPN20-226ENST00000513156 MAGI3Q5TCQ9 1506 aa17.59■□□□□ 0.41
PTPN20-226ENST00000513156 WDR7Q9Y4E6 1490 aa17.56■□□□□ 0.4
PTPN20-226ENST00000513156 MADDQ8WXG6 1647 aa17.56■□□□□ 0.4
PTPN20-226ENST00000513156 BCORL1Q5H9F3 1711 aa17.55■□□□□ 0.4
PTPN20-226ENST00000513156 IGF1RP08069 1367 aa17.55■□□□□ 0.4
PTPN20-226ENST00000513156 IQGAP2Q13576 1575 aa17.54■□□□□ 0.4
PTPN20-226ENST00000513156 CD109Q6YHK3 1445 aa17.54■□□□□ 0.4
PTPN20-226ENST00000513156 DISP1Q96F81 1524 aa17.53■□□□□ 0.4
PTPN20-226ENST00000513156 HSPA2P54652 639 aa17.5■□□□□ 0.39
PTPN20-226ENST00000513156 ARAP3Q8WWN8 1544 aa17.49■□□□□ 0.39
PTPN20-226ENST00000513156 RIMS1Q86UR5 1692 aaKnown RBP17.48■□□□□ 0.39
PTPN20-226ENST00000513156 KIF27Q86VH2 1401 aa17.41■□□□□ 0.38
PTPN20-226ENST00000513156 KIAA0556O60303 1618 aa17.41■□□□□ 0.38
PTPN20-226ENST00000513156 KCNH8Q96L42 1107 aa17.41■□□□□ 0.38
PTPN20-226ENST00000513156 CHIC1Q5VXU3 224 aa17.4■□□□□ 0.38
PTPN20-226ENST00000513156 CARMIL1Q5VZK9 1371 aa17.4■□□□□ 0.38
PTPN20-226ENST00000513156 UGGT2Q9NYU1 1516 aa17.39■□□□□ 0.37
PTPN20-226ENST00000513156 FRMPD1Q5SYB0 1578 aa17.36■□□□□ 0.37
PTPN20-226ENST00000513156 ARID4BQ4LE39 1312 aaPredicted RBP17.34■□□□□ 0.37
PTPN20-226ENST00000513156 RAPGEF3O95398 923 aa17.33■□□□□ 0.36
PTPN20-226ENST00000513156 STRCQ7RTU9 1775 aa17.31■□□□□ 0.36
PTPN20-226ENST00000513156 ABCA8O94911 1581 aa17.31■□□□□ 0.36
PTPN20-226ENST00000513156 ARHGEF40Q8TER5 1519 aa17.29■□□□□ 0.36
PTPN20-226ENST00000513156 ABCA9Q8IUA7 1624 aa17.29■□□□□ 0.36
PTPN20-226ENST00000513156 PHLDB1Q86UU1 1377 aa17.28■□□□□ 0.36
PTPN20-226ENST00000513156 PLPPR3Q6T4P5 718 aa17.28■□□□□ 0.36
PTPN20-226ENST00000513156 SIGLEC1Q9BZZ2 1709 aa17.27■□□□□ 0.36
PTPN20-226ENST00000513156 PREX1Q8TCU6 1659 aa17.25■□□□□ 0.35
PTPN20-226ENST00000513156 FER1L4A9Z1Z3 1794 aa17.25■□□□□ 0.35
PTPN20-226ENST00000513156 NEO1Q92859 1461 aa17.24■□□□□ 0.35
PTPN20-226ENST00000513156 RICTORQ6R327 1708 aa17.22■□□□□ 0.35
PTPN20-226ENST00000513156 TTC37Q6PGP7 1564 aa17.22■□□□□ 0.35
PTPN20-226ENST00000513156 YEATS2Q9ULM3 1422 aa17.21■□□□□ 0.35
PTPN20-226ENST00000513156 CTTNBP2Q8WZ74 1663 aa17.17■□□□□ 0.34
PTPN20-226ENST00000513156 FANCAO15360 1455 aa17.17■□□□□ 0.34
PTPN20-226ENST00000513156 LTBP4Q8N2S1 1624 aa17.16■□□□□ 0.34
PTPN20-226ENST00000513156 POGZQ7Z3K3 1410 aa17.15■□□□□ 0.34
PTPN20-226ENST00000513156 DMRT2Q9Y5R5 561 aa17.15■□□□□ 0.34
PTPN20-226ENST00000513156 RAPGEF2Q9Y4G8 1499 aa17.14■□□□□ 0.33
PTPN20-226ENST00000513156 ATP10BO94823 1461 aa17.13■□□□□ 0.33
PTPN20-226ENST00000513156 IQSEC2Q5JU85 1478 aa17.12■□□□□ 0.33
PTPN20-226ENST00000513156 SETD1BQ9UPS6 1966 aaKnown RBP17.11■□□□□ 0.33
PTPN20-226ENST00000513156 ARID3CA6NKF2 412 aa17.11■□□□□ 0.33
PTPN20-226ENST00000513156 GOLGA3Q08378 1498 aa17.11■□□□□ 0.33
PTPN20-226ENST00000513156 AKNAQ7Z591 1439 aa17.1■□□□□ 0.33
PTPN20-226ENST00000513156 ZMYM4Q5VZL5 1548 aa17.1■□□□□ 0.33
PTPN20-226ENST00000513156 PTPRTO14522 1441 aa17.09■□□□□ 0.33
PTPN20-226ENST00000513156 DENND4BO75064 1496 aaPredicted RBP17.09■□□□□ 0.33
PTPN20-226ENST00000513156 ZFYVE16Q7Z3T8 1539 aa17.08■□□□□ 0.32
PTPN20-226ENST00000513156 FHOD3Q2V2M9 1422 aa17.08■□□□□ 0.32
PTPN20-226ENST00000513156 MLECQ14165 292 aa17.08■□□□□ 0.32
PTPN20-226ENST00000513156 ARHGEF12Q9NZN5 1544 aa17.07■□□□□ 0.32
PTPN20-226ENST00000513156 EFCAB5A4FU69 1503 aa17.06■□□□□ 0.32
PTPN20-226ENST00000513156 EEA1Q15075 1411 aa17.05■□□□□ 0.32
PTPN20-226ENST00000513156 CEBPAP49715 358 aaPredicted RBP17.04■□□□□ 0.32
PTPN20-226ENST00000513156 MED1Q15648 1581 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms