RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 SHROOM2Q13796 1616 aa11.13□□□□□ -0.63
KDM3B-208ENST00000512928 NUP160Q12769 1436 aa11.13□□□□□ -0.63
KDM3B-208ENST00000512928 CUL7Q14999 1698 aa11.11□□□□□ -0.63
KDM3B-208ENST00000512928 IGF1RP08069 1367 aa11.09□□□□□ -0.63
KDM3B-208ENST00000512928 RUSC2Q8N2Y8 1516 aa11.08□□□□□ -0.64
KDM3B-208ENST00000512928 PRG4Q92954 1404 aaPredicted RBP11.06□□□□□ -0.64
KDM3B-208ENST00000512928 CARMIL1Q5VZK9 1371 aa11.05□□□□□ -0.64
KDM3B-208ENST00000512928 JPH4Q96JJ6 628 aa11.04□□□□□ -0.64
KDM3B-208ENST00000512928 ADCY10Q96PN6 1610 aa11.02□□□□□ -0.65
KDM3B-208ENST00000512928 KIAA0586Q9BVV6 1533 aa11.01□□□□□ -0.65
KDM3B-208ENST00000512928 TSPOAP1O95153 1857 aa11.01□□□□□ -0.65
KDM3B-208ENST00000512928 TTBK1Q5TCY1 1321 aaPredicted RBP11□□□□□ -0.65
KDM3B-208ENST00000512928 RAPGEF2Q9Y4G8 1499 aa10.98□□□□□ -0.65
KDM3B-208ENST00000512928 DIP2BQ9P265 1576 aa10.98□□□□□ -0.65
KDM3B-208ENST00000512928 IQGAP2Q13576 1575 aa10.96□□□□□ -0.65
KDM3B-208ENST00000512928 FAM69CQ0P6D2 419 aa10.94□□□□□ -0.66
KDM3B-208ENST00000512928 ABCC10Q5T3U5 1492 aa10.93□□□□□ -0.66
KDM3B-208ENST00000512928 CARMIL2Q6F5E8 1435 aa10.93□□□□□ -0.66
KDM3B-208ENST00000512928 NPM1P06748 294 aaKnown RBP eCLIP10.92□□□□□ -0.66
KDM3B-208ENST00000512928 MAPKBP1O60336 1514 aa10.91□□□□□ -0.66
KDM3B-208ENST00000512928 KDM6BO15054 1643 aa10.91□□□□□ -0.66
KDM3B-208ENST00000512928 CTTNBP2Q8WZ74 1663 aa10.9□□□□□ -0.66
KDM3B-208ENST00000512928 FAM9AQ8IZU1 332 aaPredicted RBP10.9□□□□□ -0.66
KDM3B-208ENST00000512928 PTPRGP23470 1445 aa10.9□□□□□ -0.66
KDM3B-208ENST00000512928 PPRC1Q5VV67 1664 aaKnown RBP10.89□□□□□ -0.67
KDM3B-208ENST00000512928 TNIKQ9UKE5 1360 aa10.89□□□□□ -0.67
KDM3B-208ENST00000512928 KDM4FA0A1W2PPD8 638 aa10.88□□□□□ -0.67
KDM3B-208ENST00000512928 PRXQ9BXM0 1461 aa10.87□□□□□ -0.67
KDM3B-208ENST00000512928 CSRNP3Q8WYN3 585 aa10.87□□□□□ -0.67
KDM3B-208ENST00000512928 DISP1Q96F81 1524 aa10.87□□□□□ -0.67
KDM3B-208ENST00000512928 UGGT2Q9NYU1 1516 aa10.86□□□□□ -0.67
KDM3B-208ENST00000512928 KIAA0556O60303 1618 aa10.86□□□□□ -0.67
KDM3B-208ENST00000512928 EEA1Q15075 1411 aa10.84□□□□□ -0.67
KDM3B-208ENST00000512928 ABCC2Q92887 1545 aa10.84□□□□□ -0.67
KDM3B-208ENST00000512928 RANGAP1P46060 587 aaPredicted RBP10.83□□□□□ -0.68
KDM3B-208ENST00000512928 GOLGA3Q08378 1498 aa10.82□□□□□ -0.68
KDM3B-208ENST00000512928 EHMT2Q96KQ7 1210 aa10.82□□□□□ -0.68
KDM3B-208ENST00000512928 UACAQ9BZF9 1416 aa10.82□□□□□ -0.68
KDM3B-208ENST00000512928 P3H3Q8IVL6 736 aa10.8□□□□□ -0.68
KDM3B-208ENST00000512928 ASXL2Q76L83 1435 aa10.8□□□□□ -0.68
KDM3B-208ENST00000512928 COL17A1Q9UMD9 1497 aaPredicted RBP10.8□□□□□ -0.68
KDM3B-208ENST00000512928 UHRF1BP1LA0JNW5 1464 aa10.78□□□□□ -0.68
KDM3B-208ENST00000512928 ZCCHC11Q5TAX3 1644 aaKnown RBP10.77□□□□□ -0.68
KDM3B-208ENST00000512928 PLB1Q6P1J6 1458 aa10.77□□□□□ -0.69
KDM3B-208ENST00000512928 ADGRL1O94910 1474 aa10.76□□□□□ -0.69
KDM3B-208ENST00000512928 KIF21BO75037 1637 aa10.76□□□□□ -0.69
KDM3B-208ENST00000512928 MAP3K4Q9Y6R4 1608 aa10.76□□□□□ -0.69
KDM3B-208ENST00000512928 ARID3CA6NKF2 412 aa10.75□□□□□ -0.69
KDM3B-208ENST00000512928 KDM5BQ9UGL1 1544 aa10.74□□□□□ -0.69
KDM3B-208ENST00000512928 GLI2P10070 1586 aa10.73□□□□□ -0.69
KDM3B-208ENST00000512928 UBTFP17480 764 aaKnown RBP10.73□□□□□ -0.69
KDM3B-208ENST00000512928 ILDR1Q86SU0 546 aaPredicted RBP10.72□□□□□ -0.69
KDM3B-208ENST00000512928 EPRSP07814 1512 aaKnown RBP10.72□□□□□ -0.69
KDM3B-208ENST00000512928 ABCA8O94911 1581 aa10.72□□□□□ -0.69
KDM3B-208ENST00000512928 SAMD9Q5K651 1589 aa10.72□□□□□ -0.69
KDM3B-208ENST00000512928 HECW2Q9P2P5 1572 aa10.7□□□□□ -0.7
KDM3B-208ENST00000512928 FHOD3Q2V2M9 1422 aa10.7□□□□□ -0.7
KDM3B-208ENST00000512928 WDR7Q9Y4E6 1490 aa10.69□□□□□ -0.7
KDM3B-208ENST00000512928 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.69□□□□□ -0.7
KDM3B-208ENST00000512928 HNRNPUL2Q1KMD3 747 aaKnown RBP10.69□□□□□ -0.7
KDM3B-208ENST00000512928 KCNH8Q96L42 1107 aa10.68□□□□□ -0.7
KDM3B-208ENST00000512928 RAPGEF6Q8TEU7 1601 aa10.67□□□□□ -0.7
KDM3B-208ENST00000512928 EFCAB5A4FU69 1503 aa10.67□□□□□ -0.7
KDM3B-208ENST00000512928 ATP10BO94823 1461 aa10.63□□□□□ -0.71
KDM3B-208ENST00000512928 ATP1B4Q9UN42 357 aaPredicted RBP10.63□□□□□ -0.71
KDM3B-208ENST00000512928 TEX14Q8IWB6 1497 aa10.62□□□□□ -0.71
KDM3B-208ENST00000512928 NUP153P49790 1475 aaKnown RBP10.61□□□□□ -0.71
KDM3B-208ENST00000512928 CFAP43Q8NDM7 1665 aa10.6□□□□□ -0.71
KDM3B-208ENST00000512928 CD109Q6YHK3 1445 aa10.6□□□□□ -0.71
KDM3B-208ENST00000512928 FOXD1Q16676 465 aa10.6□□□□□ -0.71
KDM3B-208ENST00000512928 ARHGAP35Q9NRY4 1499 aa10.59□□□□□ -0.71
KDM3B-208ENST00000512928 FMN1Q68DA7 1419 aa10.58□□□□□ -0.72
KDM3B-208ENST00000512928 PLEKHD1A6NEE1 506 aa10.57□□□□□ -0.72
KDM3B-208ENST00000512928 CDK13Q14004 1512 aaKnown RBP10.57□□□□□ -0.72
KDM3B-208ENST00000512928 HECW1Q76N89 1606 aa10.56□□□□□ -0.72
KDM3B-208ENST00000512928 MAGI3Q5TCQ9 1506 aa10.56□□□□□ -0.72
KDM3B-208ENST00000512928 ABCA9Q8IUA7 1624 aa10.55□□□□□ -0.72
KDM3B-208ENST00000512928 FRMPD1Q5SYB0 1578 aa10.54□□□□□ -0.72
KDM3B-208ENST00000512928 SIGLEC1Q9BZZ2 1709 aa10.53□□□□□ -0.72
KDM3B-208ENST00000512928 CLIP1P30622 1438 aa10.52□□□□□ -0.73
KDM3B-208ENST00000512928 PCF11O94913 1555 aaKnown RBP10.51□□□□□ -0.73
KDM3B-208ENST00000512928 ADAMTSL3P82987 1691 aa10.5□□□□□ -0.73
KDM3B-208ENST00000512928 CDK11AQ9UQ88 783 aaPredicted RBP10.5□□□□□ -0.73
KDM3B-208ENST00000512928 MADDQ8WXG6 1647 aa10.5□□□□□ -0.73
KDM3B-208ENST00000512928 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.49□□□□□ -0.73
KDM3B-208ENST00000512928 TTC37Q6PGP7 1564 aa10.49□□□□□ -0.73
KDM3B-208ENST00000512928 RAPGEF3O95398 923 aa10.49□□□□□ -0.73
KDM3B-208ENST00000512928 RIMS1Q86UR5 1692 aaKnown RBP10.47□□□□□ -0.73
KDM3B-208ENST00000512928 BCORL1Q5H9F3 1711 aa10.47□□□□□ -0.73
KDM3B-208ENST00000512928 LRRIQ1Q96JM4 1722 aa10.47□□□□□ -0.73
KDM3B-208ENST00000512928 CASKIN1Q8WXD9 1431 aa10.47□□□□□ -0.73
KDM3B-208ENST00000512928 FANCAO15360 1455 aa10.47□□□□□ -0.73
KDM3B-208ENST00000512928 PTPRMP28827 1452 aa10.47□□□□□ -0.73
KDM3B-208ENST00000512928 NEO1Q92859 1461 aa10.47□□□□□ -0.73
KDM3B-208ENST00000512928 ARAP3Q8WWN8 1544 aa10.47□□□□□ -0.73
KDM3B-208ENST00000512928 CFAP74Q9C0B2 1584 aa10.47□□□□□ -0.73
KDM3B-208ENST00000512928 KIF14Q15058 1648 aa10.47□□□□□ -0.73
KDM3B-208ENST00000512928 PLPPR3Q6T4P5 718 aa10.46□□□□□ -0.73
KDM3B-208ENST00000512928 CCDC18Q5T9S5 1454 aa10.46□□□□□ -0.74
KDM3B-208ENST00000512928 FYCO1Q9BQS8 1478 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms