RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 GLIPR1L2Q4G1C9 344 aa16.54■□□□□ 0.24
COL11A1-210ENST00000512756 HIRIP3Q9BW71 556 aaPredicted RBP16.53■□□□□ 0.24
COL11A1-210ENST00000512756 TNIKQ9UKE5 1360 aa16.52■□□□□ 0.24
COL11A1-210ENST00000512756 RRP7BPQ9NSQ0 103 aa16.52■□□□□ 0.24
COL11A1-210ENST00000512756 CHMP7Q8WUX9 453 aaPredicted RBP16.52■□□□□ 0.23
COL11A1-210ENST00000512756 IRX6P78412 446 aaPredicted RBP16.51■□□□□ 0.23
COL11A1-210ENST00000512756 DDRGK1Q96HY6 314 aa16.51■□□□□ 0.23
COL11A1-210ENST00000512756 MYH16Q9H6N6 1097 aa16.5■□□□□ 0.23
COL11A1-210ENST00000512756 WRNQ14191 1432 aaPredicted RBP eCLIP16.49■□□□□ 0.23
COL11A1-210ENST00000512756 RB1CC1Q8TDY2 1594 aa16.47■□□□□ 0.23
COL11A1-210ENST00000512756 CEP164Q9UPV0 1460 aa16.47■□□□□ 0.23
COL11A1-210ENST00000512756 BECN1Q14457 450 aa16.47■□□□□ 0.23
COL11A1-210ENST00000512756 ANP32EQ9BTT0 268 aa16.45■□□□□ 0.22
COL11A1-210ENST00000512756 PLEKHD1A6NEE1 506 aa16.45■□□□□ 0.22
COL11A1-210ENST00000512756 CDCA8Q53HL2 280 aa16.44■□□□□ 0.22
COL11A1-210ENST00000512756 KIF27Q86VH2 1401 aa16.43■□□□□ 0.22
COL11A1-210ENST00000512756 CFAP53Q96M91 514 aa16.38■□□□□ 0.21
COL11A1-210ENST00000512756 ARXQ96QS3 562 aa16.37■□□□□ 0.21
COL11A1-210ENST00000512756 KNSTRNQ9Y448 316 aa16.36■□□□□ 0.21
COL11A1-210ENST00000512756 CFDP1Q9UEE9 299 aaPredicted RBP16.36■□□□□ 0.21
COL11A1-210ENST00000512756 SUPT16HQ9Y5B9 1047 aaKnown RBP16.36■□□□□ 0.21
COL11A1-210ENST00000512756 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
COL11A1-210ENST00000512756 GOLGA6L22H0YM25 854 aa16.34■□□□□ 0.21
COL11A1-210ENST00000512756 NACADO15069 1562 aa16.34■□□□□ 0.21
COL11A1-210ENST00000512756 CARD11Q9BXL7 1154 aa16.34■□□□□ 0.21
COL11A1-210ENST00000512756 RGL3Q3MIN7 710 aa16.34■□□□□ 0.21
COL11A1-210ENST00000512756 PPP4R2Q9NY27 417 aa16.33■□□□□ 0.21
COL11A1-210ENST00000512756 PLPPR3Q6T4P5 718 aa16.33■□□□□ 0.21
COL11A1-210ENST00000512756 PPM1GO15355 546 aaPredicted RBP16.32■□□□□ 0.2
COL11A1-210ENST00000512756 TIMELESSQ9UNS1 1208 aa16.32■□□□□ 0.2
COL11A1-210ENST00000512756 NCLP19338 710 aaKnown RBP16.32■□□□□ 0.2
COL11A1-210ENST00000512756 KCNH8Q96L42 1107 aa16.3■□□□□ 0.2
COL11A1-210ENST00000512756 TRIM44Q96DX7 344 aaPredicted RBP16.3■□□□□ 0.2
COL11A1-210ENST00000512756 PPP1R15AO75807 674 aaPredicted RBP16.29■□□□□ 0.2
COL11A1-210ENST00000512756 FHAD1B1AJZ9 1412 aa16.27■□□□□ 0.19
COL11A1-210ENST00000512756 CCNB3Q8WWL7 1395 aa16.26■□□□□ 0.19
COL11A1-210ENST00000512756 SIN3AQ96ST3 1273 aa16.26■□□□□ 0.19
COL11A1-210ENST00000512756 FTSJ3Q8IY81 847 aaKnown RBP16.24■□□□□ 0.19
COL11A1-210ENST00000512756 BAZ1AQ9NRL2 1556 aaPredicted RBP16.24■□□□□ 0.19
COL11A1-210ENST00000512756 CASC1Q6TDU7 716 aa16.23■□□□□ 0.19
COL11A1-210ENST00000512756 NUDCQ9Y266 331 aa16.22■□□□□ 0.19
COL11A1-210ENST00000512756 CHMP4BQ9H444 224 aaKnown RBP16.21■□□□□ 0.19
COL11A1-210ENST00000512756 CCER2I3L3R5 266 aa16.2■□□□□ 0.18
COL11A1-210ENST00000512756 MAPK8IP3Q9UPT6 1336 aa16.2■□□□□ 0.18
COL11A1-210ENST00000512756 MS4A1P11836 297 aa16.2■□□□□ 0.18
COL11A1-210ENST00000512756 ERICH6BQ5W0A0 696 aa16.18■□□□□ 0.18
COL11A1-210ENST00000512756 NOP58Q9Y2X3 529 aaKnown RBP16.17■□□□□ 0.18
COL11A1-210ENST00000512756 C14orf37Q86TY3 774 aa16.16■□□□□ 0.18
COL11A1-210ENST00000512756 SENP3-EIF4A1A0A087X0R7 540 aa16.14■□□□□ 0.17
COL11A1-210ENST00000512756 CDK11BP21127 795 aaKnown RBP16.14■□□□□ 0.17
COL11A1-210ENST00000512756 NEUROD2Q15784 382 aa16.14■□□□□ 0.17
COL11A1-210ENST00000512756 TMF1P82094 1093 aa16.13■□□□□ 0.17
COL11A1-210ENST00000512756 ZBTB7CA1YPR0 619 aa16.12■□□□□ 0.17
COL11A1-210ENST00000512756 PNNQ9H307 717 aaKnown RBP16.12■□□□□ 0.17
COL11A1-210ENST00000512756 CARMIL1Q5VZK9 1371 aa16.12■□□□□ 0.17
COL11A1-210ENST00000512756 RGS3P49796 1198 aa16.12■□□□□ 0.17
COL11A1-210ENST00000512756 SETD5Q9C0A6 1442 aa16.12■□□□□ 0.17
COL11A1-210ENST00000512756 PTMAP06454 111 aaKnown RBP16.12■□□□□ 0.17
COL11A1-210ENST00000512756 VPS8Q8N3P4 1428 aa16.11■□□□□ 0.17
COL11A1-210ENST00000512756 ZRSR1Q15695 479 aaKnown RBP16.11■□□□□ 0.17
COL11A1-210ENST00000512756 FRAT1Q92837 279 aaPredicted RBP16.1■□□□□ 0.17
COL11A1-210ENST00000512756 POGKQ9P215 609 aa16.09■□□□□ 0.17
COL11A1-210ENST00000512756 CC2D1BQ5T0F9 858 aaKnown RBP16.09■□□□□ 0.17
COL11A1-210ENST00000512756 SENP3Q9H4L4 574 aaPredicted RBP16.09■□□□□ 0.17
COL11A1-210ENST00000512756 B4GALNT3Q6L9W6 998 aa16.09■□□□□ 0.17
COL11A1-210ENST00000512756 SOGA1O94964 1423 aa16.09■□□□□ 0.17
COL11A1-210ENST00000512756 LAS1LQ9Y4W2 734 aaKnown RBP16.08■□□□□ 0.17
COL11A1-210ENST00000512756 DCAF11Q8TEB1 546 aa16.07■□□□□ 0.16
COL11A1-210ENST00000512756 CUX2O14529 1486 aa16.06■□□□□ 0.16
COL11A1-210ENST00000512756 CECR2Q9BXF3 1484 aa16.06■□□□□ 0.16
COL11A1-210ENST00000512756 ARHGAP35Q9NRY4 1499 aa16.05■□□□□ 0.16
COL11A1-210ENST00000512756 A0A0G2JS52 829 aa16.05■□□□□ 0.16
COL11A1-210ENST00000512756 TNNT2P45379 298 aaPredicted RBP16.04■□□□□ 0.16
COL11A1-210ENST00000512756 KANK1Q14678 1352 aa16.04■□□□□ 0.16
COL11A1-210ENST00000512756 HSP90AB1P08238 724 aaKnown RBP16.03■□□□□ 0.16
COL11A1-210ENST00000512756 HSPA5P11021 654 aaKnown RBP16.03■□□□□ 0.16
COL11A1-210ENST00000512756 DNTTIP2Q5QJE6 756 aaKnown RBP16.03■□□□□ 0.16
COL11A1-210ENST00000512756 U2SURPO15042 1029 aaKnown RBP16.02■□□□□ 0.16
COL11A1-210ENST00000512756 ARID4BQ4LE39 1312 aaPredicted RBP16■□□□□ 0.15
COL11A1-210ENST00000512756 PLEKHG5O94827 1062 aa16■□□□□ 0.15
COL11A1-210ENST00000512756 CFAP44Q96MT7 982 aa16■□□□□ 0.15
COL11A1-210ENST00000512756 HAP1P54257 671 aaPredicted RBP15.98■□□□□ 0.15
COL11A1-210ENST00000512756 HSCBQ8IWL3 235 aa15.98■□□□□ 0.15
COL11A1-210ENST00000512756 KTN1Q86UP2 1357 aaKnown RBP15.98■□□□□ 0.15
COL11A1-210ENST00000512756 RBM19Q9Y4C8 960 aaKnown RBP15.97■□□□□ 0.15
COL11A1-210ENST00000512756 EIF4G1Q04637 1599 aaKnown RBP15.96■□□□□ 0.15
COL11A1-210ENST00000512756 MORC1Q86VD1 984 aa15.96■□□□□ 0.15
COL11A1-210ENST00000512756 NAP1L5Q96NT1 182 aaPredicted RBP15.96■□□□□ 0.15
COL11A1-210ENST00000512756 L1TD1Q5T7N2 865 aaKnown RBP15.95■□□□□ 0.14
COL11A1-210ENST00000512756 RALBP1Q15311 655 aa15.95■□□□□ 0.14
COL11A1-210ENST00000512756 PKD2Q13563 968 aa15.94■□□□□ 0.14
COL11A1-210ENST00000512756 KANK4Q5T7N3 995 aaPredicted RBP15.94■□□□□ 0.14
COL11A1-210ENST00000512756 ERCC6Q03468 1493 aa15.94■□□□□ 0.14
COL11A1-210ENST00000512756 OS9Q13438 667 aaPredicted RBP15.94■□□□□ 0.14
COL11A1-210ENST00000512756 RAB3GAP2Q9H2M9 1393 aa15.94■□□□□ 0.14
COL11A1-210ENST00000512756 HDGFP51858 240 aaKnown RBP15.93■□□□□ 0.14
COL11A1-210ENST00000512756 GOLGA6L6A8MZA4 724 aa15.93■□□□□ 0.14
COL11A1-210ENST00000512756 CCDC88BA6NC98 1476 aa15.93■□□□□ 0.14
COL11A1-210ENST00000512756 FMN1Q68DA7 1419 aa15.92■□□□□ 0.14
COL11A1-210ENST00000512756 KCNJ4P48050 445 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms