RNA–Protein interactions for RNA: ENST00000512432.1

CCDC149-207, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-207ENST00000512432 ABCA10Q8WWZ4 1543 aa14.13□□□□□ -0.15
CCDC149-207ENST00000512432 BIVM-ERCC5R4GMW8 1640 aa14.11□□□□□ -0.15
CCDC149-207ENST00000512432 TOP2BQ02880 1626 aa14.08□□□□□ -0.15
CCDC149-207ENST00000512432 WRNQ14191 1432 aaPredicted RBP eCLIP14.07□□□□□ -0.16
CCDC149-207ENST00000512432 NPM3O75607 178 aaKnown RBP14.04□□□□□ -0.16
CCDC149-207ENST00000512432 TRHP20396 242 aaPredicted RBP14.03□□□□□ -0.16
CCDC149-207ENST00000512432 ADAMTS12P58397 1594 aa14.02□□□□□ -0.16
CCDC149-207ENST00000512432 GRIN2AQ12879 1464 aa14□□□□□ -0.17
CCDC149-207ENST00000512432 POTEDQ86YR6 584 aa14□□□□□ -0.17
CCDC149-207ENST00000512432 CEP170Q5SW79 1584 aa13.97□□□□□ -0.17
CCDC149-207ENST00000512432 ERICH3Q5RHP9 1530 aa13.96□□□□□ -0.17
CCDC149-207ENST00000512432 RNF216Q9NWF9 866 aaPredicted RBP13.96□□□□□ -0.17
CCDC149-207ENST00000512432 FHAD1B1AJZ9 1412 aa13.95□□□□□ -0.18
CCDC149-207ENST00000512432 NUP160Q12769 1436 aa13.93□□□□□ -0.18
CCDC149-207ENST00000512432 ERCC6L2Q5T890 1561 aa13.92□□□□□ -0.18
CCDC149-207ENST00000512432 SHROOM2Q13796 1616 aa13.92□□□□□ -0.18
CCDC149-207ENST00000512432 HOXD11P31277 338 aaPredicted RBP13.91□□□□□ -0.18
CCDC149-207ENST00000512432 RUSC2Q8N2Y8 1516 aa13.82□□□□□ -0.2
CCDC149-207ENST00000512432 PRG4Q92954 1404 aaPredicted RBP13.81□□□□□ -0.2
CCDC149-207ENST00000512432 CUL7Q14999 1698 aa13.8□□□□□ -0.2
CCDC149-207ENST00000512432 JPH4Q96JJ6 628 aa13.79□□□□□ -0.2
CCDC149-207ENST00000512432 KIF27Q86VH2 1401 aa13.78□□□□□ -0.2
CCDC149-207ENST00000512432 KIF13AQ9H1H9 1805 aa13.76□□□□□ -0.21
CCDC149-207ENST00000512432 IGF1RP08069 1367 aa13.75□□□□□ -0.21
CCDC149-207ENST00000512432 KIAA0586Q9BVV6 1533 aa13.72□□□□□ -0.21
CCDC149-207ENST00000512432 DCAF8L1A6NGE4 600 aa13.69□□□□□ -0.22
CCDC149-207ENST00000512432 ADCY10Q96PN6 1610 aa13.68□□□□□ -0.22
CCDC149-207ENST00000512432 CARMIL1Q5VZK9 1371 aa13.68□□□□□ -0.22
CCDC149-207ENST00000512432 NPM1P06748 294 aaKnown RBP eCLIP13.67□□□□□ -0.22
CCDC149-207ENST00000512432 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
CCDC149-207ENST00000512432 IQGAP2Q13576 1575 aa13.63□□□□□ -0.23
CCDC149-207ENST00000512432 DIP2BQ9P265 1576 aa13.62□□□□□ -0.23
CCDC149-207ENST00000512432 ABCC10Q5T3U5 1492 aa13.61□□□□□ -0.23
CCDC149-207ENST00000512432 TSPOAP1O95153 1857 aa13.61□□□□□ -0.23
CCDC149-207ENST00000512432 FAM69CQ0P6D2 419 aa13.6□□□□□ -0.23
CCDC149-207ENST00000512432 CARMIL2Q6F5E8 1435 aa13.6□□□□□ -0.23
CCDC149-207ENST00000512432 PTPRGP23470 1445 aa13.59□□□□□ -0.23
CCDC149-207ENST00000512432 SLC4A1APQ9BWU0 796 aaKnown RBP13.59□□□□□ -0.23
CCDC149-207ENST00000512432 TTBK1Q5TCY1 1321 aaPredicted RBP13.59□□□□□ -0.23
CCDC149-207ENST00000512432 TNIKQ9UKE5 1360 aa13.58□□□□□ -0.24
CCDC149-207ENST00000512432 RAPGEF2Q9Y4G8 1499 aa13.56□□□□□ -0.24
CCDC149-207ENST00000512432 CTTNBP2Q8WZ74 1663 aa13.55□□□□□ -0.24
CCDC149-207ENST00000512432 ABCC2Q92887 1545 aa13.53□□□□□ -0.24
CCDC149-207ENST00000512432 DISP1Q96F81 1524 aa13.53□□□□□ -0.24
CCDC149-207ENST00000512432 UGGT2Q9NYU1 1516 aa13.52□□□□□ -0.25
CCDC149-207ENST00000512432 KDM6BO15054 1643 aa13.51□□□□□ -0.25
CCDC149-207ENST00000512432 KIAA0556O60303 1618 aa13.5□□□□□ -0.25
CCDC149-207ENST00000512432 UHRF1BP1LA0JNW5 1464 aa13.49□□□□□ -0.25
CCDC149-207ENST00000512432 UACAQ9BZF9 1416 aa13.49□□□□□ -0.25
CCDC149-207ENST00000512432 PLB1Q6P1J6 1458 aa13.48□□□□□ -0.25
CCDC149-207ENST00000512432 ASXL2Q76L83 1435 aa13.47□□□□□ -0.25
CCDC149-207ENST00000512432 ZCCHC11Q5TAX3 1644 aaKnown RBP13.46□□□□□ -0.25
CCDC149-207ENST00000512432 GLI2P10070 1586 aa13.45□□□□□ -0.26
CCDC149-207ENST00000512432 PPRC1Q5VV67 1664 aaKnown RBP13.45□□□□□ -0.26
CCDC149-207ENST00000512432 KDM5BQ9UGL1 1544 aa13.44□□□□□ -0.26
CCDC149-207ENST00000512432 GOLGA3Q08378 1498 aa13.42□□□□□ -0.26
CCDC149-207ENST00000512432 MAP3K4Q9Y6R4 1608 aa13.41□□□□□ -0.26
CCDC149-207ENST00000512432 PRXQ9BXM0 1461 aa13.41□□□□□ -0.26
CCDC149-207ENST00000512432 EPRSP07814 1512 aaKnown RBP13.39□□□□□ -0.27
CCDC149-207ENST00000512432 ABCA8O94911 1581 aa13.37□□□□□ -0.27
CCDC149-207ENST00000512432 WDR7Q9Y4E6 1490 aa13.36□□□□□ -0.27
CCDC149-207ENST00000512432 TEX14Q8IWB6 1497 aa13.35□□□□□ -0.27
CCDC149-207ENST00000512432 CFAP43Q8NDM7 1665 aa13.33□□□□□ -0.28
CCDC149-207ENST00000512432 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC149-207ENST00000512432 FAM9AQ8IZU1 332 aaPredicted RBP13.31□□□□□ -0.28
CCDC149-207ENST00000512432 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
CCDC149-207ENST00000512432 KDM4FA0A1W2PPD8 638 aa13.3□□□□□ -0.28
CCDC149-207ENST00000512432 P3H3Q8IVL6 736 aa13.29□□□□□ -0.28
CCDC149-207ENST00000512432 KCNH8Q96L42 1107 aa13.29□□□□□ -0.28
CCDC149-207ENST00000512432 COL17A1Q9UMD9 1497 aaPredicted RBP13.29□□□□□ -0.28
CCDC149-207ENST00000512432 SAMD9Q5K651 1589 aa13.28□□□□□ -0.28
CCDC149-207ENST00000512432 EEA1Q15075 1411 aa13.27□□□□□ -0.29
CCDC149-207ENST00000512432 CD109Q6YHK3 1445 aa13.27□□□□□ -0.29
CCDC149-207ENST00000512432 RAPGEF6Q8TEU7 1601 aa13.25□□□□□ -0.29
CCDC149-207ENST00000512432 MAGI3Q5TCQ9 1506 aa13.25□□□□□ -0.29
CCDC149-207ENST00000512432 ARID3CA6NKF2 412 aa13.25□□□□□ -0.29
CCDC149-207ENST00000512432 SLC4A2P04920 1241 aa13.25□□□□□ -0.29
CCDC149-207ENST00000512432 ATP10BO94823 1461 aa13.23□□□□□ -0.29
CCDC149-207ENST00000512432 ADGRL1O94910 1474 aa13.23□□□□□ -0.29
CCDC149-207ENST00000512432 RANGAP1P46060 587 aaPredicted RBP13.21□□□□□ -0.29
CCDC149-207ENST00000512432 ABCA9Q8IUA7 1624 aa13.21□□□□□ -0.3
CCDC149-207ENST00000512432 KIF21BO75037 1637 aa13.2□□□□□ -0.3
CCDC149-207ENST00000512432 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.18□□□□□ -0.3
CCDC149-207ENST00000512432 HNRNPUL2Q1KMD3 747 aaKnown RBP13.18□□□□□ -0.3
CCDC149-207ENST00000512432 EHMT2Q96KQ7 1210 aa13.18□□□□□ -0.3
CCDC149-207ENST00000512432 FHOD3Q2V2M9 1422 aa13.17□□□□□ -0.3
CCDC149-207ENST00000512432 NUP153P49790 1475 aaKnown RBP13.16□□□□□ -0.3
CCDC149-207ENST00000512432 EFCAB5A4FU69 1503 aa13.15□□□□□ -0.3
CCDC149-207ENST00000512432 ARAP3Q8WWN8 1544 aa13.15□□□□□ -0.3
CCDC149-207ENST00000512432 FOXD4L1Q9NU39 408 aa13.14□□□□□ -0.31
CCDC149-207ENST00000512432 PHLDB1Q86UU1 1377 aa13.11□□□□□ -0.31
CCDC149-207ENST00000512432 NEO1Q92859 1461 aa13.1□□□□□ -0.31
CCDC149-207ENST00000512432 ZBTB22O15209 634 aa13.1□□□□□ -0.31
CCDC149-207ENST00000512432 PLEKHD1A6NEE1 506 aa13.09□□□□□ -0.31
CCDC149-207ENST00000512432 RNF39Q9H2S5 420 aa13.09□□□□□ -0.31
CCDC149-207ENST00000512432 UBTFP17480 764 aaKnown RBP13.08□□□□□ -0.32
CCDC149-207ENST00000512432 CFAP74Q9C0B2 1584 aa13.07□□□□□ -0.32
CCDC149-207ENST00000512432 HECW2Q9P2P5 1572 aa13.07□□□□□ -0.32
CCDC149-207ENST00000512432 FRMPD1Q5SYB0 1578 aa13.07□□□□□ -0.32
CCDC149-207ENST00000512432 RAPGEF3O95398 923 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms