RNA–Protein interactions for RNA: ENST00000511896.5

APBB3-219, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,032 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-219ENST00000511896 CTTNBP2Q8WZ74 1663 aa29.51■■■□□ 2.31
APBB3-219ENST00000511896 GRIN2BQ13224 1484 aa29.5■■■□□ 2.31
APBB3-219ENST00000511896 FHAD1B1AJZ9 1412 aa29.47■■■□□ 2.31
APBB3-219ENST00000511896 ADAMTS12P58397 1594 aa29.43■■■□□ 2.3
APBB3-219ENST00000511896 EFCAB5A4FU69 1503 aa29.39■■■□□ 2.3
APBB3-219ENST00000511896 EIF4G3O43432 1585 aaKnown RBP29.37■■■□□ 2.29
APBB3-219ENST00000511896 P3H3Q8IVL6 736 aa29.35■■■□□ 2.29
APBB3-219ENST00000511896 FHOD3Q2V2M9 1422 aa29.31■■■□□ 2.28
APBB3-219ENST00000511896 KANK4Q5T7N3 995 aaPredicted RBP29.31■■■□□ 2.28
APBB3-219ENST00000511896 SNAPC4Q5SXM2 1469 aa29.29■■■□□ 2.28
APBB3-219ENST00000511896 SAMD9Q5K651 1589 aa29.25■■■□□ 2.27
APBB3-219ENST00000511896 MAP3K1Q13233 1512 aa29.23■■■□□ 2.27
APBB3-219ENST00000511896 MAGI1Q96QZ7 1491 aaPredicted RBP29.2■■■□□ 2.27
APBB3-219ENST00000511896 PCF11O94913 1555 aaKnown RBP29.2■■■□□ 2.26
APBB3-219ENST00000511896 IQGAP2Q13576 1575 aa29.19■■■□□ 2.26
APBB3-219ENST00000511896 FMN1Q68DA7 1419 aa29.18■■■□□ 2.26
APBB3-219ENST00000511896 TIAM1Q13009 1591 aa29.18■■■□□ 2.26
APBB3-219ENST00000511896 GRIN2AQ12879 1464 aa29.16■■■□□ 2.26
APBB3-219ENST00000511896 CASKIN1Q8WXD9 1431 aa29.15■■■□□ 2.26
APBB3-219ENST00000511896 FYCO1Q9BQS8 1478 aa29.15■■■□□ 2.26
APBB3-219ENST00000511896 SYNJ2O15056 1496 aa29.11■■■□□ 2.25
APBB3-219ENST00000511896 KIAA0586Q9BVV6 1533 aa29.09■■■□□ 2.25
APBB3-219ENST00000511896 CHMP7Q8WUX9 453 aaPredicted RBP29.08■■■□□ 2.25
APBB3-219ENST00000511896 ATP1B4Q9UN42 357 aaPredicted RBP29.08■■■□□ 2.25
APBB3-219ENST00000511896 ZEB1P37275 1124 aaPredicted RBP29.07■■■□□ 2.24
APBB3-219ENST00000511896 LRRC9Q6ZRR7 1453 aa29.07■■■□□ 2.24
APBB3-219ENST00000511896 CFAP43Q8NDM7 1665 aa29.06■■■□□ 2.24
APBB3-219ENST00000511896 UGGT2Q9NYU1 1516 aa29.05■■■□□ 2.24
APBB3-219ENST00000511896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.03■■■□□ 2.24
APBB3-219ENST00000511896 HNRNPUL2Q1KMD3 747 aaKnown RBP29.01■■■□□ 2.24
APBB3-219ENST00000511896 RRBP1Q9P2E9 1410 aaKnown RBP29.01■■■□□ 2.23
APBB3-219ENST00000511896 FBLN2P98095 1184 aa28.99■■■□□ 2.23
APBB3-219ENST00000511896 CEP170Q5SW79 1584 aa28.96■■■□□ 2.23
APBB3-219ENST00000511896 CCER1Q8TC90 406 aaPredicted RBP28.94■■■□□ 2.22
APBB3-219ENST00000511896 NUP160Q12769 1436 aa28.93■■■□□ 2.22
APBB3-219ENST00000511896 DISP1Q96F81 1524 aa28.91■■■□□ 2.22
APBB3-219ENST00000511896 CCNB3Q8WWL7 1395 aa28.9■■■□□ 2.22
APBB3-219ENST00000511896 LRRIQ1Q96JM4 1722 aa28.88■■■□□ 2.21
APBB3-219ENST00000511896 KIAA0556O60303 1618 aa28.88■■■□□ 2.21
APBB3-219ENST00000511896 PHLDB1Q86UU1 1377 aa28.86■■■□□ 2.21
APBB3-219ENST00000511896 MTUS2Q5JR59 1369 aa28.8■■■□□ 2.2
APBB3-219ENST00000511896 HECW1Q76N89 1606 aa28.79■■■□□ 2.2
APBB3-219ENST00000511896 JPH4Q96JJ6 628 aa28.79■■■□□ 2.2
APBB3-219ENST00000511896 CCDC18Q5T9S5 1454 aa28.79■■■□□ 2.2
APBB3-219ENST00000511896 EPRSP07814 1512 aaKnown RBP28.73■■■□□ 2.19
APBB3-219ENST00000511896 CARMIL2Q6F5E8 1435 aa28.71■■■□□ 2.19
APBB3-219ENST00000511896 EHBP1L1Q8N3D4 1523 aa28.68■■■□□ 2.18
APBB3-219ENST00000511896 CHD1O14646 1710 aa28.67■■■□□ 2.18
APBB3-219ENST00000511896 MAGI3Q5TCQ9 1506 aa28.67■■■□□ 2.18
APBB3-219ENST00000511896 CDK13Q14004 1512 aaKnown RBP28.65■■■□□ 2.18
APBB3-219ENST00000511896 NCOA2Q15596 1464 aa28.64■■■□□ 2.18
APBB3-219ENST00000511896 ITGAEP38570 1179 aa28.64■■■□□ 2.17
APBB3-219ENST00000511896 RAPGEF6Q8TEU7 1601 aa28.63■■■□□ 2.17
APBB3-219ENST00000511896 SUPT6HQ7KZ85 1726 aaKnown RBP28.63■■■□□ 2.17
APBB3-219ENST00000511896 FAM50AQ14320 339 aaKnown RBP28.62■■■□□ 2.17
APBB3-219ENST00000511896 NUP153P49790 1475 aaKnown RBP28.62■■■□□ 2.17
APBB3-219ENST00000511896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.61■■■□□ 2.17
APBB3-219ENST00000511896 FGD6Q6ZV73 1430 aa28.6■■■□□ 2.17
APBB3-219ENST00000511896 ARID3CA6NKF2 412 aa28.59■■■□□ 2.17
APBB3-219ENST00000511896 ARHGEF11O15085 1522 aa28.57■■■□□ 2.16
APBB3-219ENST00000511896 PLB1Q6P1J6 1458 aa28.56■■■□□ 2.16
APBB3-219ENST00000511896 MYOM3Q5VTT5 1437 aa28.56■■■□□ 2.16
APBB3-219ENST00000511896 PRG4Q92954 1404 aaPredicted RBP28.53■■■□□ 2.16
APBB3-219ENST00000511896 CDK11AQ9UQ88 783 aaPredicted RBP28.47■■■□□ 2.15
APBB3-219ENST00000511896 SHROOM2Q13796 1616 aa28.46■■■□□ 2.15
APBB3-219ENST00000511896 DHX57Q6P158 1386 aaKnown RBP28.45■■■□□ 2.14
APBB3-219ENST00000511896 ABCA8O94911 1581 aa28.44■■■□□ 2.14
APBB3-219ENST00000511896 RAB3GAP2Q9H2M9 1393 aa28.42■■■□□ 2.14
APBB3-219ENST00000511896 PTPRGP23470 1445 aa28.41■■■□□ 2.14
APBB3-219ENST00000511896 SETD5Q9C0A6 1442 aa28.41■■■□□ 2.14
APBB3-219ENST00000511896 PTPN23Q9H3S7 1636 aa28.39■■■□□ 2.14
APBB3-219ENST00000511896 CLSPNQ9HAW4 1339 aa28.38■■■□□ 2.13
APBB3-219ENST00000511896 TROQ12816 1431 aaPredicted RBP28.36■■■□□ 2.13
APBB3-219ENST00000511896 MIA2Q96PC5 1412 aa28.36■■■□□ 2.13
APBB3-219ENST00000511896 TCOF1Q13428 1488 aaKnown RBP28.35■■■□□ 2.13
APBB3-219ENST00000511896 CLASP1Q7Z460 1538 aa28.34■■■□□ 2.13
APBB3-219ENST00000511896 PTPRKQ15262 1439 aa28.33■■■□□ 2.12
APBB3-219ENST00000511896 ATP10BO94823 1461 aa28.31■■■□□ 2.12
APBB3-219ENST00000511896 ERCC6L2Q5T890 1561 aa28.28■■■□□ 2.12
APBB3-219ENST00000511896 PLEKHD1A6NEE1 506 aa28.25■■■□□ 2.11
APBB3-219ENST00000511896 ADCY10Q96PN6 1610 aa28.24■■■□□ 2.11
APBB3-219ENST00000511896 UACAQ9BZF9 1416 aa28.24■■■□□ 2.11
APBB3-219ENST00000511896 HFM1A2PYH4 1435 aa28.23■■■□□ 2.11
APBB3-219ENST00000511896 KIF14Q15058 1648 aa28.2■■■□□ 2.11
APBB3-219ENST00000511896 NAIPQ13075 1403 aa28.16■■■□□ 2.1
APBB3-219ENST00000511896 GPATCH8Q9UKJ3 1502 aaKnown RBP28.15■■■□□ 2.1
APBB3-219ENST00000511896 ZNF644Q9H582 1327 aaPredicted RBP28.13■■■□□ 2.09
APBB3-219ENST00000511896 ITSN2Q9NZM3 1697 aa28.12■■■□□ 2.09
APBB3-219ENST00000511896 MAPKBP1O60336 1514 aa28.12■■■□□ 2.09
APBB3-219ENST00000511896 CFDP1Q9UEE9 299 aaPredicted RBP28.12■■■□□ 2.09
APBB3-219ENST00000511896 ABCC2Q92887 1545 aa28.12■■■□□ 2.09
APBB3-219ENST00000511896 CHIC2Q9UKJ5 165 aa28.1■■■□□ 2.09
APBB3-219ENST00000511896 ABCC10Q5T3U5 1492 aa28.1■■■□□ 2.09
APBB3-219ENST00000511896 AKNAQ7Z591 1439 aa28.08■■■□□ 2.09
APBB3-219ENST00000511896 DAPK1P53355 1430 aa28.07■■■□□ 2.08
APBB3-219ENST00000511896 RRP7BPQ9NSQ0 103 aa28.06■■■□□ 2.08
APBB3-219ENST00000511896 DNMT1P26358 1616 aaKnown RBP28.06■■■□□ 2.08
APBB3-219ENST00000511896 ABCC5O15440 1437 aa28.06■■■□□ 2.08
APBB3-219ENST00000511896 CAMSAP2Q08AD1 1489 aa28.05■■■□□ 2.08
APBB3-219ENST00000511896 CDC42BPAQ5VT25 1732 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms