RNA–Protein interactions for RNA: ENST00000511896.5

APBB3-219, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 2

Gene APBB3, Length 2,032 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-219	ENST00000511896	CTTNBP2	Q8WZ74	1663 aa		29.51	■■■□□ 2.31
APBB3-219	ENST00000511896	GRIN2B	Q13224	1484 aa		29.5	■■■□□ 2.31
APBB3-219	ENST00000511896	FHAD1	B1AJZ9	1412 aa		29.47	■■■□□ 2.31
APBB3-219	ENST00000511896	ADAMTS12	P58397	1594 aa		29.43	■■■□□ 2.3
APBB3-219	ENST00000511896	EFCAB5	A4FU69	1503 aa		29.39	■■■□□ 2.3
APBB3-219	ENST00000511896	EIF4G3	O43432	1585 aa	Known RBP	29.37	■■■□□ 2.29
APBB3-219	ENST00000511896	P3H3	Q8IVL6	736 aa		29.35	■■■□□ 2.29
APBB3-219	ENST00000511896	FHOD3	Q2V2M9	1422 aa		29.31	■■■□□ 2.28
APBB3-219	ENST00000511896	KANK4	Q5T7N3	995 aa	Predicted RBP	29.31	■■■□□ 2.28
APBB3-219	ENST00000511896	SNAPC4	Q5SXM2	1469 aa		29.29	■■■□□ 2.28
APBB3-219	ENST00000511896	SAMD9	Q5K651	1589 aa		29.25	■■■□□ 2.27
APBB3-219	ENST00000511896	MAP3K1	Q13233	1512 aa		29.23	■■■□□ 2.27
APBB3-219	ENST00000511896	MAGI1	Q96QZ7	1491 aa	Predicted RBP	29.2	■■■□□ 2.27
APBB3-219	ENST00000511896	PCF11	O94913	1555 aa	Known RBP	29.2	■■■□□ 2.26
APBB3-219	ENST00000511896	IQGAP2	Q13576	1575 aa		29.19	■■■□□ 2.26
APBB3-219	ENST00000511896	FMN1	Q68DA7	1419 aa		29.18	■■■□□ 2.26
APBB3-219	ENST00000511896	TIAM1	Q13009	1591 aa		29.18	■■■□□ 2.26
APBB3-219	ENST00000511896	GRIN2A	Q12879	1464 aa		29.16	■■■□□ 2.26
APBB3-219	ENST00000511896	CASKIN1	Q8WXD9	1431 aa		29.15	■■■□□ 2.26
APBB3-219	ENST00000511896	FYCO1	Q9BQS8	1478 aa		29.15	■■■□□ 2.26
APBB3-219	ENST00000511896	SYNJ2	O15056	1496 aa		29.11	■■■□□ 2.25
APBB3-219	ENST00000511896	KIAA0586	Q9BVV6	1533 aa		29.09	■■■□□ 2.25
APBB3-219	ENST00000511896	CHMP7	Q8WUX9	453 aa	Predicted RBP	29.08	■■■□□ 2.25
APBB3-219	ENST00000511896	ATP1B4	Q9UN42	357 aa	Predicted RBP	29.08	■■■□□ 2.25
APBB3-219	ENST00000511896	ZEB1	P37275	1124 aa	Predicted RBP	29.07	■■■□□ 2.24
APBB3-219	ENST00000511896	LRRC9	Q6ZRR7	1453 aa		29.07	■■■□□ 2.24
APBB3-219	ENST00000511896	CFAP43	Q8NDM7	1665 aa		29.06	■■■□□ 2.24
APBB3-219	ENST00000511896	UGGT2	Q9NYU1	1516 aa		29.05	■■■□□ 2.24
APBB3-219	ENST00000511896	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	29.03	■■■□□ 2.24
APBB3-219	ENST00000511896	HNRNPUL2	Q1KMD3	747 aa	Known RBP	29.01	■■■□□ 2.24
APBB3-219	ENST00000511896	RRBP1	Q9P2E9	1410 aa	Known RBP	29.01	■■■□□ 2.23
APBB3-219	ENST00000511896	FBLN2	P98095	1184 aa		28.99	■■■□□ 2.23
APBB3-219	ENST00000511896	CEP170	Q5SW79	1584 aa		28.96	■■■□□ 2.23
APBB3-219	ENST00000511896	CCER1	Q8TC90	406 aa	Predicted RBP	28.94	■■■□□ 2.22
APBB3-219	ENST00000511896	NUP160	Q12769	1436 aa		28.93	■■■□□ 2.22
APBB3-219	ENST00000511896	DISP1	Q96F81	1524 aa		28.91	■■■□□ 2.22
APBB3-219	ENST00000511896	CCNB3	Q8WWL7	1395 aa		28.9	■■■□□ 2.22
APBB3-219	ENST00000511896	LRRIQ1	Q96JM4	1722 aa		28.88	■■■□□ 2.21
APBB3-219	ENST00000511896	KIAA0556	O60303	1618 aa		28.88	■■■□□ 2.21
APBB3-219	ENST00000511896	PHLDB1	Q86UU1	1377 aa		28.86	■■■□□ 2.21
APBB3-219	ENST00000511896	MTUS2	Q5JR59	1369 aa		28.8	■■■□□ 2.2
APBB3-219	ENST00000511896	HECW1	Q76N89	1606 aa		28.79	■■■□□ 2.2
APBB3-219	ENST00000511896	JPH4	Q96JJ6	628 aa		28.79	■■■□□ 2.2
APBB3-219	ENST00000511896	CCDC18	Q5T9S5	1454 aa		28.79	■■■□□ 2.2
APBB3-219	ENST00000511896	EPRS	P07814	1512 aa	Known RBP	28.73	■■■□□ 2.19
APBB3-219	ENST00000511896	CARMIL2	Q6F5E8	1435 aa		28.71	■■■□□ 2.19
APBB3-219	ENST00000511896	EHBP1L1	Q8N3D4	1523 aa		28.68	■■■□□ 2.18
APBB3-219	ENST00000511896	CHD1	O14646	1710 aa		28.67	■■■□□ 2.18
APBB3-219	ENST00000511896	MAGI3	Q5TCQ9	1506 aa		28.67	■■■□□ 2.18
APBB3-219	ENST00000511896	CDK13	Q14004	1512 aa	Known RBP	28.65	■■■□□ 2.18
APBB3-219	ENST00000511896	NCOA2	Q15596	1464 aa		28.64	■■■□□ 2.18
APBB3-219	ENST00000511896	ITGAE	P38570	1179 aa		28.64	■■■□□ 2.17
APBB3-219	ENST00000511896	RAPGEF6	Q8TEU7	1601 aa		28.63	■■■□□ 2.17
APBB3-219	ENST00000511896	SUPT6H	Q7KZ85	1726 aa	Known RBP	28.63	■■■□□ 2.17
APBB3-219	ENST00000511896	FAM50A	Q14320	339 aa	Known RBP	28.62	■■■□□ 2.17
APBB3-219	ENST00000511896	NUP153	P49790	1475 aa	Known RBP	28.62	■■■□□ 2.17
APBB3-219	ENST00000511896	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	28.61	■■■□□ 2.17
APBB3-219	ENST00000511896	FGD6	Q6ZV73	1430 aa		28.6	■■■□□ 2.17
APBB3-219	ENST00000511896	ARID3C	A6NKF2	412 aa		28.59	■■■□□ 2.17
APBB3-219	ENST00000511896	ARHGEF11	O15085	1522 aa		28.57	■■■□□ 2.16
APBB3-219	ENST00000511896	PLB1	Q6P1J6	1458 aa		28.56	■■■□□ 2.16
APBB3-219	ENST00000511896	MYOM3	Q5VTT5	1437 aa		28.56	■■■□□ 2.16
APBB3-219	ENST00000511896	PRG4	Q92954	1404 aa	Predicted RBP	28.53	■■■□□ 2.16
APBB3-219	ENST00000511896	CDK11A	Q9UQ88	783 aa	Predicted RBP	28.47	■■■□□ 2.15
APBB3-219	ENST00000511896	SHROOM2	Q13796	1616 aa		28.46	■■■□□ 2.15
APBB3-219	ENST00000511896	DHX57	Q6P158	1386 aa	Known RBP	28.45	■■■□□ 2.14
APBB3-219	ENST00000511896	ABCA8	O94911	1581 aa		28.44	■■■□□ 2.14
APBB3-219	ENST00000511896	RAB3GAP2	Q9H2M9	1393 aa		28.42	■■■□□ 2.14
APBB3-219	ENST00000511896	PTPRG	P23470	1445 aa		28.41	■■■□□ 2.14
APBB3-219	ENST00000511896	SETD5	Q9C0A6	1442 aa		28.41	■■■□□ 2.14
APBB3-219	ENST00000511896	PTPN23	Q9H3S7	1636 aa		28.39	■■■□□ 2.14
APBB3-219	ENST00000511896	CLSPN	Q9HAW4	1339 aa		28.38	■■■□□ 2.13
APBB3-219	ENST00000511896	TRO	Q12816	1431 aa	Predicted RBP	28.36	■■■□□ 2.13
APBB3-219	ENST00000511896	MIA2	Q96PC5	1412 aa		28.36	■■■□□ 2.13
APBB3-219	ENST00000511896	TCOF1	Q13428	1488 aa	Known RBP	28.35	■■■□□ 2.13
APBB3-219	ENST00000511896	CLASP1	Q7Z460	1538 aa		28.34	■■■□□ 2.13
APBB3-219	ENST00000511896	PTPRK	Q15262	1439 aa		28.33	■■■□□ 2.12
APBB3-219	ENST00000511896	ATP10B	O94823	1461 aa		28.31	■■■□□ 2.12
APBB3-219	ENST00000511896	ERCC6L2	Q5T890	1561 aa		28.28	■■■□□ 2.12
APBB3-219	ENST00000511896	PLEKHD1	A6NEE1	506 aa		28.25	■■■□□ 2.11
APBB3-219	ENST00000511896	ADCY10	Q96PN6	1610 aa		28.24	■■■□□ 2.11
APBB3-219	ENST00000511896	UACA	Q9BZF9	1416 aa		28.24	■■■□□ 2.11
APBB3-219	ENST00000511896	HFM1	A2PYH4	1435 aa		28.23	■■■□□ 2.11
APBB3-219	ENST00000511896	KIF14	Q15058	1648 aa		28.2	■■■□□ 2.11
APBB3-219	ENST00000511896	NAIP	Q13075	1403 aa		28.16	■■■□□ 2.1
APBB3-219	ENST00000511896	GPATCH8	Q9UKJ3	1502 aa	Known RBP	28.15	■■■□□ 2.1
APBB3-219	ENST00000511896	ZNF644	Q9H582	1327 aa	Predicted RBP	28.13	■■■□□ 2.09
APBB3-219	ENST00000511896	ITSN2	Q9NZM3	1697 aa		28.12	■■■□□ 2.09
APBB3-219	ENST00000511896	MAPKBP1	O60336	1514 aa		28.12	■■■□□ 2.09
APBB3-219	ENST00000511896	CFDP1	Q9UEE9	299 aa	Predicted RBP	28.12	■■■□□ 2.09
APBB3-219	ENST00000511896	ABCC2	Q92887	1545 aa		28.12	■■■□□ 2.09
APBB3-219	ENST00000511896	CHIC2	Q9UKJ5	165 aa		28.1	■■■□□ 2.09
APBB3-219	ENST00000511896	ABCC10	Q5T3U5	1492 aa		28.1	■■■□□ 2.09
APBB3-219	ENST00000511896	AKNA	Q7Z591	1439 aa		28.08	■■■□□ 2.09
APBB3-219	ENST00000511896	DAPK1	P53355	1430 aa		28.07	■■■□□ 2.08
APBB3-219	ENST00000511896	RRP7BP	Q9NSQ0	103 aa		28.06	■■■□□ 2.08
APBB3-219	ENST00000511896	DNMT1	P26358	1616 aa	Known RBP	28.06	■■■□□ 2.08
APBB3-219	ENST00000511896	ABCC5	O15440	1437 aa		28.06	■■■□□ 2.08
APBB3-219	ENST00000511896	CAMSAP2	Q08AD1	1489 aa		28.05	■■■□□ 2.08
APBB3-219	ENST00000511896	CDC42BPA	Q5VT25	1732 aa		28.02	■■■□□ 2.08

Retrieved 100 of 20,778 RNA–protein pairs in 90 ms