RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 PRG4Q92954 1404 aaPredicted RBP22.28■■□□□ 1.16
COPS4-210ENST00000511708 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.15
COPS4-210ENST00000511708 ERICH3Q5RHP9 1530 aa22.21■■□□□ 1.15
COPS4-210ENST00000511708 JPH4Q96JJ6 628 aa22.2■■□□□ 1.14
COPS4-210ENST00000511708 ADCY10Q96PN6 1610 aa22.19■■□□□ 1.14
COPS4-210ENST00000511708 TSPOAP1O95153 1857 aa22.17■■□□□ 1.14
COPS4-210ENST00000511708 NPM1P06748 294 aaKnown RBP eCLIP22.15■■□□□ 1.14
COPS4-210ENST00000511708 BIVM-ERCC5R4GMW8 1640 aa22.15■■□□□ 1.14
COPS4-210ENST00000511708 RUSC2Q8N2Y8 1516 aa22.15■■□□□ 1.14
COPS4-210ENST00000511708 TOP2BQ02880 1626 aa22.12■■□□□ 1.13
COPS4-210ENST00000511708 ADGRL1O94910 1474 aa22.03■■□□□ 1.12
COPS4-210ENST00000511708 PPRC1Q5VV67 1664 aaKnown RBP21.99■■□□□ 1.11
COPS4-210ENST00000511708 HECW2Q9P2P5 1572 aa21.98■■□□□ 1.11
COPS4-210ENST00000511708 KIAA0586Q9BVV6 1533 aa21.92■■□□□ 1.1
COPS4-210ENST00000511708 GLI2P10070 1586 aa21.91■■□□□ 1.1
COPS4-210ENST00000511708 COL17A1Q9UMD9 1497 aaPredicted RBP21.86■■□□□ 1.09
COPS4-210ENST00000511708 ABCC2Q92887 1545 aa21.85■■□□□ 1.09
COPS4-210ENST00000511708 PLB1Q6P1J6 1458 aa21.83■■□□□ 1.09
COPS4-210ENST00000511708 ASXL2Q76L83 1435 aa21.83■■□□□ 1.09
COPS4-210ENST00000511708 PTPRGP23470 1445 aa21.82■■□□□ 1.08
COPS4-210ENST00000511708 CUL7Q14999 1698 aa21.79■■□□□ 1.08
COPS4-210ENST00000511708 MAP3K4Q9Y6R4 1608 aa21.78■■□□□ 1.08
COPS4-210ENST00000511708 UHRF1BP1LA0JNW5 1464 aa21.75■■□□□ 1.07
COPS4-210ENST00000511708 TNIKQ9UKE5 1360 aa21.74■■□□□ 1.07
COPS4-210ENST00000511708 IGF1RP08069 1367 aa21.73■■□□□ 1.07
COPS4-210ENST00000511708 FBXO41Q8TF61 875 aa21.72■■□□□ 1.07
COPS4-210ENST00000511708 EPRSP07814 1512 aaKnown RBP21.71■■□□□ 1.07
COPS4-210ENST00000511708 TEX14Q8IWB6 1497 aa21.71■■□□□ 1.07
COPS4-210ENST00000511708 CARMIL2Q6F5E8 1435 aa21.68■■□□□ 1.06
COPS4-210ENST00000511708 TTBK1Q5TCY1 1321 aaPredicted RBP21.66■■□□□ 1.06
COPS4-210ENST00000511708 KDM5BQ9UGL1 1544 aa21.65■■□□□ 1.06
COPS4-210ENST00000511708 UACAQ9BZF9 1416 aa21.65■■□□□ 1.06
COPS4-210ENST00000511708 ZCCHC11Q5TAX3 1644 aaKnown RBP21.61■■□□□ 1.05
COPS4-210ENST00000511708 KIF27Q86VH2 1401 aa21.61■■□□□ 1.05
COPS4-210ENST00000511708 IQGAP2Q13576 1575 aa21.61■■□□□ 1.05
COPS4-210ENST00000511708 SUPT5HO00267 1087 aaKnown RBP21.6■■□□□ 1.05
COPS4-210ENST00000511708 DISP1Q96F81 1524 aa21.58■■□□□ 1.04
COPS4-210ENST00000511708 CARMIL1Q5VZK9 1371 aa21.54■■□□□ 1.04
COPS4-210ENST00000511708 KIF21BO75037 1637 aa21.51■■□□□ 1.03
COPS4-210ENST00000511708 WDR7Q9Y4E6 1490 aa21.5■■□□□ 1.03
COPS4-210ENST00000511708 MAGI3Q5TCQ9 1506 aa21.5■■□□□ 1.03
COPS4-210ENST00000511708 CFAP43Q8NDM7 1665 aa21.49■■□□□ 1.03
COPS4-210ENST00000511708 UGGT2Q9NYU1 1516 aa21.46■■□□□ 1.03
COPS4-210ENST00000511708 KIAA0556O60303 1618 aa21.44■■□□□ 1.02
COPS4-210ENST00000511708 CD109Q6YHK3 1445 aa21.43■■□□□ 1.02
COPS4-210ENST00000511708 ADAMTSL3P82987 1691 aa21.42■■□□□ 1.02
COPS4-210ENST00000511708 PTPRMP28827 1452 aa21.39■■□□□ 1.02
COPS4-210ENST00000511708 ARAP3Q8WWN8 1544 aa21.36■■□□□ 1.01
COPS4-210ENST00000511708 LMTK3Q96Q04 1460 aa21.34■■□□□ 1.01
COPS4-210ENST00000511708 PCF11O94913 1555 aaKnown RBP21.33■■□□□ 1.01
COPS4-210ENST00000511708 ABCA8O94911 1581 aa21.3■■□□□ 1
COPS4-210ENST00000511708 KCNH8Q96L42 1107 aa21.28■■□□□ 1
COPS4-210ENST00000511708 BCORL1Q5H9F3 1711 aa21.28■■□□□ 1
COPS4-210ENST00000511708 RAPGEF2Q9Y4G8 1499 aa21.27■■□□□ 1
COPS4-210ENST00000511708 MADDQ8WXG6 1647 aa21.25■□□□□ 0.99
COPS4-210ENST00000511708 CTTNBP2Q8WZ74 1663 aa21.2■□□□□ 0.98
COPS4-210ENST00000511708 PHLDB1Q86UU1 1377 aa21.2■□□□□ 0.98
COPS4-210ENST00000511708 ABCA9Q8IUA7 1624 aa21.18■□□□□ 0.98
COPS4-210ENST00000511708 GOLGA3Q08378 1498 aa21.17■□□□□ 0.98
COPS4-210ENST00000511708 FRMPD1Q5SYB0 1578 aa21.15■□□□□ 0.98
COPS4-210ENST00000511708 RIMS1Q86UR5 1692 aaKnown RBP21.15■□□□□ 0.98
COPS4-210ENST00000511708 SOCS7O14512 581 aa21.14■□□□□ 0.97
COPS4-210ENST00000511708 ILDR2Q71H61 639 aa21.14■□□□□ 0.97
COPS4-210ENST00000511708 RAPGEF3O95398 923 aa21.13■□□□□ 0.97
COPS4-210ENST00000511708 CERKQ8TCT0 537 aa21.13■□□□□ 0.97
COPS4-210ENST00000511708 NEO1Q92859 1461 aa21.12■□□□□ 0.97
COPS4-210ENST00000511708 ATP10BO94823 1461 aa21.09■□□□□ 0.97
COPS4-210ENST00000511708 HSPA2P54652 639 aa21.09■□□□□ 0.97
COPS4-210ENST00000511708 ARHGEF40Q8TER5 1519 aa21.07■□□□□ 0.96
COPS4-210ENST00000511708 ARID4BQ4LE39 1312 aaPredicted RBP21.06■□□□□ 0.96
COPS4-210ENST00000511708 DISP3Q9P2K9 1392 aa21.06■□□□□ 0.96
COPS4-210ENST00000511708 RICTORQ6R327 1708 aa21.01■□□□□ 0.95
COPS4-210ENST00000511708 SIGLEC1Q9BZZ2 1709 aa20.98■□□□□ 0.95
COPS4-210ENST00000511708 ARID3CA6NKF2 412 aa20.98■□□□□ 0.95
COPS4-210ENST00000511708 FHOD3Q2V2M9 1422 aa20.94■□□□□ 0.94
COPS4-210ENST00000511708 FANCAO15360 1455 aa20.94■□□□□ 0.94
COPS4-210ENST00000511708 DENND4BO75064 1496 aaPredicted RBP20.94■□□□□ 0.94
COPS4-210ENST00000511708 TTC37Q6PGP7 1564 aa20.93■□□□□ 0.94
COPS4-210ENST00000511708 SPATA31D1Q6ZQQ2 1576 aa20.93■□□□□ 0.94
COPS4-210ENST00000511708 POGZQ7Z3K3 1410 aa20.93■□□□□ 0.94
COPS4-210ENST00000511708 FER1L4A9Z1Z3 1794 aa20.92■□□□□ 0.94
COPS4-210ENST00000511708 ZMYM4Q5VZL5 1548 aa20.92■□□□□ 0.94
COPS4-210ENST00000511708 RAPGEF6Q8TEU7 1601 aa20.9■□□□□ 0.94
COPS4-210ENST00000511708 PRXQ9BXM0 1461 aa20.9■□□□□ 0.94
COPS4-210ENST00000511708 AKNAQ7Z591 1439 aa20.9■□□□□ 0.94
COPS4-210ENST00000511708 STRCQ7RTU9 1775 aa20.89■□□□□ 0.93
COPS4-210ENST00000511708 PREX1Q8TCU6 1659 aa20.89■□□□□ 0.93
COPS4-210ENST00000511708 PLPPR3Q6T4P5 718 aa20.88■□□□□ 0.93
COPS4-210ENST00000511708 FAM9AQ8IZU1 332 aaPredicted RBP20.87■□□□□ 0.93
COPS4-210ENST00000511708 ZFYVE16Q7Z3T8 1539 aa20.87■□□□□ 0.93
COPS4-210ENST00000511708 CFAP74Q9C0B2 1584 aa20.86■□□□□ 0.93
COPS4-210ENST00000511708 EFCAB5A4FU69 1503 aa20.86■□□□□ 0.93
COPS4-210ENST00000511708 YEATS2Q9ULM3 1422 aa20.86■□□□□ 0.93
COPS4-210ENST00000511708 SAMD9Q5K651 1589 aa20.85■□□□□ 0.93
COPS4-210ENST00000511708 P3H3Q8IVL6 736 aa20.84■□□□□ 0.93
COPS4-210ENST00000511708 MAGI2Q86UL8 1455 aa20.83■□□□□ 0.93
COPS4-210ENST00000511708 NUP153P49790 1475 aaKnown RBP20.82■□□□□ 0.92
COPS4-210ENST00000511708 ARHGEF12Q9NZN5 1544 aa20.81■□□□□ 0.92
COPS4-210ENST00000511708 HECW1Q76N89 1606 aa20.8■□□□□ 0.92
COPS4-210ENST00000511708 SETD1BQ9UPS6 1966 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms