RNA–Protein interactions for RNA: ENST00000511573.5

FAM13A-216, Transcript of family with sequence similarity 13 member A, humanhuman

TSL 2

Gene FAM13A, Length 3,442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-216ENST00000511573 TIMELESSQ9UNS1 1208 aa11.51□□□□□ -0.57
FAM13A-216ENST00000511573 ANP32AP39687 249 aaKnown RBP11.5□□□□□ -0.57
FAM13A-216ENST00000511573 PPP4R2Q9NY27 417 aa11.5□□□□□ -0.57
FAM13A-216ENST00000511573 LAS1LQ9Y4W2 734 aaKnown RBP11.5□□□□□ -0.57
FAM13A-216ENST00000511573 EEA1Q15075 1411 aa11.48□□□□□ -0.57
FAM13A-216ENST00000511573 NPM2Q86SE8 214 aaKnown RBP11.48□□□□□ -0.57
FAM13A-216ENST00000511573 BRPF3Q9ULD4 1205 aa11.48□□□□□ -0.57
FAM13A-216ENST00000511573 NEFMP07197 916 aa11.46□□□□□ -0.58
FAM13A-216ENST00000511573 RUSC2Q8N2Y8 1516 aa11.46□□□□□ -0.58
FAM13A-216ENST00000511573 IPO9Q96P70 1041 aaKnown RBP11.45□□□□□ -0.58
FAM13A-216ENST00000511573 CCER2I3L3R5 266 aa11.45□□□□□ -0.58
FAM13A-216ENST00000511573 PPP1R15AO75807 674 aaPredicted RBP11.45□□□□□ -0.58
FAM13A-216ENST00000511573 SIN3AQ96ST3 1273 aa11.43□□□□□ -0.58
FAM13A-216ENST00000511573 CLIP1P30622 1438 aa11.4□□□□□ -0.58
FAM13A-216ENST00000511573 GOLGA3Q08378 1498 aa11.4□□□□□ -0.58
FAM13A-216ENST00000511573 BAZ1BQ9UIG0 1483 aaKnown RBP11.39□□□□□ -0.59
FAM13A-216ENST00000511573 PLEKHG5O94827 1062 aa11.39□□□□□ -0.59
FAM13A-216ENST00000511573 PEG3Q9GZU2 1588 aa11.37□□□□□ -0.59
FAM13A-216ENST00000511573 KANK4Q5T7N3 995 aaPredicted RBP11.35□□□□□ -0.59
FAM13A-216ENST00000511573 FAM9BQ8IZU0 186 aa11.35□□□□□ -0.59
FAM13A-216ENST00000511573 VSIG10Q8N0Z9 540 aa11.34□□□□□ -0.59
FAM13A-216ENST00000511573 VPS8Q8N3P4 1428 aa11.34□□□□□ -0.59
FAM13A-216ENST00000511573 SENP3-EIF4A1A0A087X0R7 540 aa11.34□□□□□ -0.59
FAM13A-216ENST00000511573 WASHC2AQ641Q2 1341 aa11.33□□□□□ -0.6
FAM13A-216ENST00000511573 ATAD2BQ9ULI0 1458 aa11.33□□□□□ -0.6
FAM13A-216ENST00000511573 CEP164Q9UPV0 1460 aa11.32□□□□□ -0.6
FAM13A-216ENST00000511573 WDR97A6NE52 1622 aa11.32□□□□□ -0.6
FAM13A-216ENST00000511573 SYNJ1O43426 1573 aa11.31□□□□□ -0.6
FAM13A-216ENST00000511573 CNGB1Q14028 1251 aaPredicted RBP11.31□□□□□ -0.6
FAM13A-216ENST00000511573 KIF21BO75037 1637 aa11.3□□□□□ -0.6
FAM13A-216ENST00000511573 ZMYND15Q9H091 742 aa11.29□□□□□ -0.6
FAM13A-216ENST00000511573 PODXL2Q9NZ53 605 aa11.29□□□□□ -0.6
FAM13A-216ENST00000511573 C11orf95C9JLR9 678 aaPredicted RBP11.28□□□□□ -0.6
FAM13A-216ENST00000511573 CCDC184Q52MB2 194 aa11.28□□□□□ -0.6
FAM13A-216ENST00000511573 GLIPR1L2Q4G1C9 344 aa11.28□□□□□ -0.6
FAM13A-216ENST00000511573 GSE1Q14687 1217 aa11.28□□□□□ -0.6
FAM13A-216ENST00000511573 WASHC2CQ9Y4E1 1318 aa11.27□□□□□ -0.61
FAM13A-216ENST00000511573 RAB3GAP2Q9H2M9 1393 aa11.26□□□□□ -0.61
FAM13A-216ENST00000511573 RSPH6AQ9H0K4 717 aa11.26□□□□□ -0.61
FAM13A-216ENST00000511573 USP35Q9P2H5 1018 aa11.25□□□□□ -0.61
FAM13A-216ENST00000511573 FRAT1Q92837 279 aaPredicted RBP11.25□□□□□ -0.61
FAM13A-216ENST00000511573 PPM1GO15355 546 aaPredicted RBP11.23□□□□□ -0.61
FAM13A-216ENST00000511573 RAPGEF2Q9Y4G8 1499 aa11.22□□□□□ -0.61
FAM13A-216ENST00000511573 SLC4A3P48751 1232 aa11.22□□□□□ -0.61
FAM13A-216ENST00000511573 MRS2Q9HD23 443 aa11.22□□□□□ -0.61
FAM13A-216ENST00000511573 CCNB3Q8WWL7 1395 aa11.19□□□□□ -0.62
FAM13A-216ENST00000511573 FAM50AQ14320 339 aaKnown RBP11.19□□□□□ -0.62
FAM13A-216ENST00000511573 MAPKBP1O60336 1514 aa11.19□□□□□ -0.62
FAM13A-216ENST00000511573 AKNAQ7Z591 1439 aa11.18□□□□□ -0.62
FAM13A-216ENST00000511573 NFKBIBQ15653 356 aa11.18□□□□□ -0.62
FAM13A-216ENST00000511573 TOP2BQ02880 1626 aa11.17□□□□□ -0.62
FAM13A-216ENST00000511573 ARXQ96QS3 562 aa11.17□□□□□ -0.62
FAM13A-216ENST00000511573 DAXXQ9UER7 740 aaPredicted RBP11.17□□□□□ -0.62
FAM13A-216ENST00000511573 PDE4AP27815 886 aa11.16□□□□□ -0.62
FAM13A-216ENST00000511573 DCAF11Q8TEB1 546 aa11.15□□□□□ -0.62
FAM13A-216ENST00000511573 NAP1L5Q96NT1 182 aaPredicted RBP11.15□□□□□ -0.62
FAM13A-216ENST00000511573 A0A0U1RQG5 324 aaPredicted RBP11.15□□□□□ -0.63
FAM13A-216ENST00000511573 FAM43AQ8N2R8 423 aa11.14□□□□□ -0.63
FAM13A-216ENST00000511573 TONSLQ96HA7 1378 aa11.14□□□□□ -0.63
FAM13A-216ENST00000511573 ARID4BQ4LE39 1312 aaPredicted RBP11.13□□□□□ -0.63
FAM13A-216ENST00000511573 ZBED9Q6R2W3 1325 aa11.13□□□□□ -0.63
FAM13A-216ENST00000511573 HSP90AA2PQ14568 343 aaPredicted RBP11.12□□□□□ -0.63
FAM13A-216ENST00000511573 BIVM-ERCC5R4GMW8 1640 aa11.12□□□□□ -0.63
FAM13A-216ENST00000511573 SKAP1Q86WV1 359 aa11.12□□□□□ -0.63
FAM13A-216ENST00000511573 NCAPD3P42695 1498 aa11.11□□□□□ -0.63
FAM13A-216ENST00000511573 RRBP1Q9P2E9 1410 aaKnown RBP11.11□□□□□ -0.63
FAM13A-216ENST00000511573 PRXQ9BXM0 1461 aa11.11□□□□□ -0.63
FAM13A-216ENST00000511573 SETD5Q9C0A6 1442 aa11.11□□□□□ -0.63
FAM13A-216ENST00000511573 ERICH3Q5RHP9 1530 aa11.1□□□□□ -0.63
FAM13A-216ENST00000511573 FRAT2O75474 233 aaPredicted RBP11.09□□□□□ -0.63
FAM13A-216ENST00000511573 DNAJC5BQ9UF47 199 aa11.09□□□□□ -0.63
FAM13A-216ENST00000511573 RRAGDQ9NQL2 400 aaPredicted RBP11.09□□□□□ -0.63
FAM13A-216ENST00000511573 BACH2Q9BYV9 841 aa11.08□□□□□ -0.64
FAM13A-216ENST00000511573 ARAP1Q96P48 1450 aa11.08□□□□□ -0.64
FAM13A-216ENST00000511573 HSPA5P11021 654 aaKnown RBP11.07□□□□□ -0.64
FAM13A-216ENST00000511573 TCERG1O14776 1098 aaKnown RBP11.07□□□□□ -0.64
FAM13A-216ENST00000511573 ATP1B4Q9UN42 357 aaPredicted RBP11.07□□□□□ -0.64
FAM13A-216ENST00000511573 EXOC6Q8TAG9 804 aa11.07□□□□□ -0.64
FAM13A-216ENST00000511573 POLR3GLQ9BT43 218 aa11.07□□□□□ -0.64
FAM13A-216ENST00000511573 PRKRIP1Q9H875 184 aaPredicted RBP11.07□□□□□ -0.64
FAM13A-216ENST00000511573 HSP90AA1P07900 732 aaKnown RBP11.06□□□□□ -0.64
FAM13A-216ENST00000511573 CUX2O14529 1486 aa11.06□□□□□ -0.64
FAM13A-216ENST00000511573 NUDCQ9Y266 331 aa11.06□□□□□ -0.64
FAM13A-216ENST00000511573 DDRGK1Q96HY6 314 aa11.05□□□□□ -0.64
FAM13A-216ENST00000511573 CUX1P39880 1505 aa11.04□□□□□ -0.64
FAM13A-216ENST00000511573 SLC24A1O60721 1099 aa11.03□□□□□ -0.64
FAM13A-216ENST00000511573 HMGXB3Q12766 1538 aa11.03□□□□□ -0.64
FAM13A-216ENST00000511573 KIF27Q86VH2 1401 aa11.03□□□□□ -0.64
FAM13A-216ENST00000511573 PNNQ9H307 717 aaKnown RBP11.03□□□□□ -0.64
FAM13A-216ENST00000511573 POGKQ9P215 609 aa11□□□□□ -0.65
FAM13A-216ENST00000511573 CC2D2AQ9P2K1 1620 aa11□□□□□ -0.65
FAM13A-216ENST00000511573 CFTRP13569 1480 aa10.99□□□□□ -0.65
FAM13A-216ENST00000511573 EIF4G2P78344 907 aaKnown RBP eCLIP10.99□□□□□ -0.65
FAM13A-216ENST00000511573 RRP9O43818 475 aaKnown RBP10.99□□□□□ -0.65
FAM13A-216ENST00000511573 SMG6Q86US8 1419 aaKnown RBP10.98□□□□□ -0.65
FAM13A-216ENST00000511573 RBM10P98175 930 aaKnown RBP10.98□□□□□ -0.65
FAM13A-216ENST00000511573 ARHGAP35Q9NRY4 1499 aa10.97□□□□□ -0.65
FAM13A-216ENST00000511573 MS4A1P11836 297 aa10.95□□□□□ -0.66
FAM13A-216ENST00000511573 CNTLNQ9NXG0 1405 aa10.95□□□□□ -0.66
FAM13A-216ENST00000511573 PLIN1O60240 522 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms