RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 SHROOM2Q13796 1616 aa14.59□□□□□ -0.07
TRIO-217ENST00000511019 IGF1RP08069 1367 aa14.56□□□□□ -0.08
TRIO-217ENST00000511019 KIF27Q86VH2 1401 aa14.53□□□□□ -0.08
TRIO-217ENST00000511019 FAM69CQ0P6D2 419 aa14.5□□□□□ -0.09
TRIO-217ENST00000511019 KIAA0586Q9BVV6 1533 aa14.48□□□□□ -0.09
TRIO-217ENST00000511019 RUSC2Q8N2Y8 1516 aa14.46□□□□□ -0.1
TRIO-217ENST00000511019 SENP3Q9H4L4 574 aaPredicted RBP14.45□□□□□ -0.1
TRIO-217ENST00000511019 CARMIL1Q5VZK9 1371 aa14.45□□□□□ -0.1
TRIO-217ENST00000511019 TTBK1Q5TCY1 1321 aaPredicted RBP14.43□□□□□ -0.1
TRIO-217ENST00000511019 ABCC10Q5T3U5 1492 aa14.42□□□□□ -0.1
TRIO-217ENST00000511019 PTPRGP23470 1445 aa14.41□□□□□ -0.1
TRIO-217ENST00000511019 CUL7Q14999 1698 aa14.4□□□□□ -0.1
TRIO-217ENST00000511019 CARMIL2Q6F5E8 1435 aa14.38□□□□□ -0.11
TRIO-217ENST00000511019 MAPKBP1O60336 1514 aa14.37□□□□□ -0.11
TRIO-217ENST00000511019 KIF13AQ9H1H9 1805 aa14.37□□□□□ -0.11
TRIO-217ENST00000511019 TNIKQ9UKE5 1360 aa14.36□□□□□ -0.11
TRIO-217ENST00000511019 ADCY10Q96PN6 1610 aa14.36□□□□□ -0.11
TRIO-217ENST00000511019 DIP2BQ9P265 1576 aa14.31□□□□□ -0.12
TRIO-217ENST00000511019 PHF23Q9BUL5 403 aaPredicted RBP14.31□□□□□ -0.12
TRIO-217ENST00000511019 RAPGEF2Q9Y4G8 1499 aa14.28□□□□□ -0.12
TRIO-217ENST00000511019 IQGAP2Q13576 1575 aa14.27□□□□□ -0.12
TRIO-217ENST00000511019 ABCC2Q92887 1545 aa14.27□□□□□ -0.12
TRIO-217ENST00000511019 UACAQ9BZF9 1416 aa14.27□□□□□ -0.12
TRIO-217ENST00000511019 PLB1Q6P1J6 1458 aa14.25□□□□□ -0.13
TRIO-217ENST00000511019 ASXL2Q76L83 1435 aa14.25□□□□□ -0.13
TRIO-217ENST00000511019 UHRF1BP1LA0JNW5 1464 aa14.25□□□□□ -0.13
TRIO-217ENST00000511019 DISP1Q96F81 1524 aa14.24□□□□□ -0.13
TRIO-217ENST00000511019 KDM6BO15054 1643 aa14.23□□□□□ -0.13
TRIO-217ENST00000511019 KDM4FA0A1W2PPD8 638 aa14.22□□□□□ -0.13
TRIO-217ENST00000511019 TSPOAP1O95153 1857 aa14.21□□□□□ -0.14
TRIO-217ENST00000511019 UGGT2Q9NYU1 1516 aa14.2□□□□□ -0.14
TRIO-217ENST00000511019 FAM9AQ8IZU1 332 aaPredicted RBP14.19□□□□□ -0.14
TRIO-217ENST00000511019 GLI2P10070 1586 aa14.17□□□□□ -0.14
TRIO-217ENST00000511019 KDM5BQ9UGL1 1544 aa14.17□□□□□ -0.14
TRIO-217ENST00000511019 EPRSP07814 1512 aaKnown RBP14.15□□□□□ -0.14
TRIO-217ENST00000511019 KCNH8Q96L42 1107 aa14.14□□□□□ -0.15
TRIO-217ENST00000511019 GOLGA3Q08378 1498 aa14.13□□□□□ -0.15
TRIO-217ENST00000511019 KIAA0556O60303 1618 aa14.13□□□□□ -0.15
TRIO-217ENST00000511019 TEX14Q8IWB6 1497 aa14.11□□□□□ -0.15
TRIO-217ENST00000511019 P3H3Q8IVL6 736 aa14.1□□□□□ -0.15
TRIO-217ENST00000511019 PRXQ9BXM0 1461 aa14.1□□□□□ -0.15
TRIO-217ENST00000511019 ZCCHC11Q5TAX3 1644 aaKnown RBP14.09□□□□□ -0.15
TRIO-217ENST00000511019 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
TRIO-217ENST00000511019 COL17A1Q9UMD9 1497 aaPredicted RBP14.09□□□□□ -0.15
TRIO-217ENST00000511019 WDR7Q9Y4E6 1490 aa14.08□□□□□ -0.16
TRIO-217ENST00000511019 PPRC1Q5VV67 1664 aaKnown RBP14.07□□□□□ -0.16
TRIO-217ENST00000511019 CD109Q6YHK3 1445 aa14.06□□□□□ -0.16
TRIO-217ENST00000511019 MAP3K4Q9Y6R4 1608 aa14.05□□□□□ -0.16
TRIO-217ENST00000511019 CTTNBP2Q8WZ74 1663 aa14.04□□□□□ -0.16
TRIO-217ENST00000511019 ARID3CA6NKF2 412 aa14.04□□□□□ -0.16
TRIO-217ENST00000511019 ABCA8O94911 1581 aa14.03□□□□□ -0.16
TRIO-217ENST00000511019 ADGRL1O94910 1474 aa14.01□□□□□ -0.17
TRIO-217ENST00000511019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.01□□□□□ -0.17
TRIO-217ENST00000511019 HNRNPUL2Q1KMD3 747 aaKnown RBP14.01□□□□□ -0.17
TRIO-217ENST00000511019 MAGI3Q5TCQ9 1506 aa14□□□□□ -0.17
TRIO-217ENST00000511019 RANGAP1P46060 587 aaPredicted RBP13.99□□□□□ -0.17
TRIO-217ENST00000511019 ATP10BO94823 1461 aa13.98□□□□□ -0.17
TRIO-217ENST00000511019 CFAP43Q8NDM7 1665 aa13.95□□□□□ -0.18
TRIO-217ENST00000511019 EEA1Q15075 1411 aa13.93□□□□□ -0.18
TRIO-217ENST00000511019 PHLDB1Q86UU1 1377 aa13.93□□□□□ -0.18
TRIO-217ENST00000511019 PLEKHD1A6NEE1 506 aa13.92□□□□□ -0.18
TRIO-217ENST00000511019 ARAP3Q8WWN8 1544 aa13.9□□□□□ -0.19
TRIO-217ENST00000511019 RAPGEF3O95398 923 aa13.89□□□□□ -0.19
TRIO-217ENST00000511019 SAMD9Q5K651 1589 aa13.88□□□□□ -0.19
TRIO-217ENST00000511019 ILDR1Q86SU0 546 aaPredicted RBP13.86□□□□□ -0.19
TRIO-217ENST00000511019 RAPGEF6Q8TEU7 1601 aa13.86□□□□□ -0.19
TRIO-217ENST00000511019 FHOD3Q2V2M9 1422 aa13.85□□□□□ -0.19
TRIO-217ENST00000511019 ABCA9Q8IUA7 1624 aa13.84□□□□□ -0.19
TRIO-217ENST00000511019 NUP153P49790 1475 aaKnown RBP13.83□□□□□ -0.2
TRIO-217ENST00000511019 NEO1Q92859 1461 aa13.83□□□□□ -0.2
TRIO-217ENST00000511019 UBTFP17480 764 aaKnown RBP13.83□□□□□ -0.2
TRIO-217ENST00000511019 ARID4BQ4LE39 1312 aaPredicted RBP13.83□□□□□ -0.2
TRIO-217ENST00000511019 EHMT2Q96KQ7 1210 aa13.82□□□□□ -0.2
TRIO-217ENST00000511019 HECW2Q9P2P5 1572 aa13.81□□□□□ -0.2
TRIO-217ENST00000511019 ATP1B4Q9UN42 357 aaPredicted RBP13.81□□□□□ -0.2
TRIO-217ENST00000511019 KIF21BO75037 1637 aa13.79□□□□□ -0.2
TRIO-217ENST00000511019 AKNAQ7Z591 1439 aa13.77□□□□□ -0.21
TRIO-217ENST00000511019 EFCAB5A4FU69 1503 aa13.76□□□□□ -0.21
TRIO-217ENST00000511019 DENND4BO75064 1496 aaPredicted RBP13.76□□□□□ -0.21
TRIO-217ENST00000511019 CDK11AQ9UQ88 783 aaPredicted RBP13.75□□□□□ -0.21
TRIO-217ENST00000511019 FANCAO15360 1455 aa13.74□□□□□ -0.21
TRIO-217ENST00000511019 PTPRMP28827 1452 aa13.74□□□□□ -0.21
TRIO-217ENST00000511019 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRIO-217ENST00000511019 EFCAB2Q5VUJ9 269 aa13.71□□□□□ -0.21
TRIO-217ENST00000511019 FMN1Q68DA7 1419 aa13.7□□□□□ -0.22
TRIO-217ENST00000511019 ADAMTSL3P82987 1691 aa13.69□□□□□ -0.22
TRIO-217ENST00000511019 PLPPR3Q6T4P5 718 aa13.69□□□□□ -0.22
TRIO-217ENST00000511019 PLCH2O75038 1416 aa13.69□□□□□ -0.22
TRIO-217ENST00000511019 FRMPD1Q5SYB0 1578 aa13.69□□□□□ -0.22
TRIO-217ENST00000511019 POGZQ7Z3K3 1410 aa13.68□□□□□ -0.22
TRIO-217ENST00000511019 SCAPERQ9BY12 1400 aa13.68□□□□□ -0.22
TRIO-217ENST00000511019 MLECQ14165 292 aa13.68□□□□□ -0.22
TRIO-217ENST00000511019 CDK13Q14004 1512 aaKnown RBP13.68□□□□□ -0.22
TRIO-217ENST00000511019 CFAP74Q9C0B2 1584 aa13.66□□□□□ -0.22
TRIO-217ENST00000511019 MAGI2Q86UL8 1455 aa13.66□□□□□ -0.22
TRIO-217ENST00000511019 ARHGAP35Q9NRY4 1499 aa13.66□□□□□ -0.22
TRIO-217ENST00000511019 BCORL1Q5H9F3 1711 aa13.65□□□□□ -0.22
TRIO-217ENST00000511019 MYT1LQ9UL68 1186 aa13.65□□□□□ -0.22
TRIO-217ENST00000511019 YEATS2Q9ULM3 1422 aa13.64□□□□□ -0.23
TRIO-217ENST00000511019 TTC37Q6PGP7 1564 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms