RNA–Protein interactions for RNA: ENST00000510667.5

LINC01088-206, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 534 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-206ENST00000510667 IFNLR1Q8IU57 520 aaPredicted RBP13.88□□□□□ -0.19
LINC01088-206ENST00000510667 ZBTB47Q9UFB7 747 aaPredicted RBP13.88□□□□□ -0.19
LINC01088-206ENST00000510667 RASEFQ8IZ41 740 aa13.86□□□□□ -0.19
LINC01088-206ENST00000510667 ZRANB1Q9UGI0 708 aa13.86□□□□□ -0.19
LINC01088-206ENST00000510667 KLHL34Q8N239 644 aa13.85□□□□□ -0.19
LINC01088-206ENST00000510667 NUBP1P53384 320 aa13.83□□□□□ -0.2
LINC01088-206ENST00000510667 SHROOM4Q9ULL8 1493 aa13.81□□□□□ -0.2
LINC01088-206ENST00000510667 TSPYL2Q9H2G4 693 aaPredicted RBP13.81□□□□□ -0.2
LINC01088-206ENST00000510667 PAK3O75914 559 aaPredicted RBP13.79□□□□□ -0.2
LINC01088-206ENST00000510667 ZNF579Q8NAF0 562 aaKnown RBP13.77□□□□□ -0.21
LINC01088-206ENST00000510667 PHF12Q96QT6 1004 aa13.76□□□□□ -0.21
LINC01088-206ENST00000510667 GABBR2O75899 941 aa13.72□□□□□ -0.21
LINC01088-206ENST00000510667 CCDC61Q9Y6R9 512 aa13.72□□□□□ -0.21
LINC01088-206ENST00000510667 CC2D2AQ9P2K1 1620 aa13.72□□□□□ -0.21
LINC01088-206ENST00000510667 CECR2Q9BXF3 1484 aa13.71□□□□□ -0.21
LINC01088-206ENST00000510667 SPOCK2Q92563 424 aa13.7□□□□□ -0.22
LINC01088-206ENST00000510667 FAM212AQ96EL1 285 aa13.68□□□□□ -0.22
LINC01088-206ENST00000510667 DCAF8Q5TAQ9 597 aa13.65□□□□□ -0.22
LINC01088-206ENST00000510667 EIF4G1Q04637 1599 aaKnown RBP13.62□□□□□ -0.23
LINC01088-206ENST00000510667 GALR2O43603 387 aaPredicted RBP13.61□□□□□ -0.23
LINC01088-206ENST00000510667 DNAJC5Q9H3Z4 198 aa13.61□□□□□ -0.23
LINC01088-206ENST00000510667 KIF12Q96FN5 646 aa13.59□□□□□ -0.23
LINC01088-206ENST00000510667 MS4A3Q96HJ5 214 aa13.57□□□□□ -0.24
LINC01088-206ENST00000510667 MAP3K13O43283 966 aa13.56□□□□□ -0.24
LINC01088-206ENST00000510667 CLCN6P51797 869 aa13.55□□□□□ -0.24
LINC01088-206ENST00000510667 GSE1Q14687 1217 aa13.55□□□□□ -0.24
LINC01088-206ENST00000510667 CIZ1Q9ULV3 898 aaPredicted RBP13.55□□□□□ -0.24
LINC01088-206ENST00000510667 PYGBP11216 843 aa13.54□□□□□ -0.24
LINC01088-206ENST00000510667 SCRIBQ14160 1630 aa13.53□□□□□ -0.24
LINC01088-206ENST00000510667 POTEIP0CG38 1075 aa13.48□□□□□ -0.25
LINC01088-206ENST00000510667 PCDHB13Q9Y5F0 798 aa13.47□□□□□ -0.25
LINC01088-206ENST00000510667 TRPC6Q9Y210 931 aa13.46□□□□□ -0.25
LINC01088-206ENST00000510667 IFNL1Q8IU54 200 aa13.44□□□□□ -0.26
LINC01088-206ENST00000510667 DCBLD2Q96PD2 775 aa13.43□□□□□ -0.26
LINC01088-206ENST00000510667 SGIP1Q9BQI5 828 aa13.41□□□□□ -0.26
LINC01088-206ENST00000510667 CHRM1P11229 460 aaPredicted RBP13.4□□□□□ -0.26
LINC01088-206ENST00000510667 PCDHB8Q9UN66 801 aa13.4□□□□□ -0.26
LINC01088-206ENST00000510667 BMP2KQ9NSY1 1161 aaPredicted RBP13.34□□□□□ -0.27
LINC01088-206ENST00000510667 PKD2Q13563 968 aa13.33□□□□□ -0.28
LINC01088-206ENST00000510667 ATMINO43313 823 aaPredicted RBP13.32□□□□□ -0.28
LINC01088-206ENST00000510667 ASTLQ6HA08 431 aaPredicted RBP13.32□□□□□ -0.28
LINC01088-206ENST00000510667 PELP1Q8IZL8 1130 aaKnown RBP13.32□□□□□ -0.28
LINC01088-206ENST00000510667 TRIM41Q8WV44 630 aa13.31□□□□□ -0.28
LINC01088-206ENST00000510667 TIE1P35590 1138 aa13.3□□□□□ -0.28
LINC01088-206ENST00000510667 ATN1P54259 1190 aaPredicted RBP13.29□□□□□ -0.28
LINC01088-206ENST00000510667 ZNF467Q7Z7K2 595 aaPredicted RBP13.29□□□□□ -0.28
LINC01088-206ENST00000510667 TTLL13PA6NNM8 815 aa13.28□□□□□ -0.28
LINC01088-206ENST00000510667 RNF25Q96BH1 459 aaPredicted RBP13.28□□□□□ -0.28
LINC01088-206ENST00000510667 CUX2O14529 1486 aa13.26□□□□□ -0.29
LINC01088-206ENST00000510667 ECM2O94769 699 aaPredicted RBP13.25□□□□□ -0.29
LINC01088-206ENST00000510667 TMEM106CQ9BVX2 250 aa13.25□□□□□ -0.29
LINC01088-206ENST00000510667 PSEN1P49768 467 aa13.2□□□□□ -0.3
LINC01088-206ENST00000510667 TRIM35Q9UPQ4 493 aa13.19□□□□□ -0.3
LINC01088-206ENST00000510667 RIOK3O14730 519 aaKnown RBP13.18□□□□□ -0.3
LINC01088-206ENST00000510667 RGL2O15211 777 aa13.18□□□□□ -0.3
LINC01088-206ENST00000510667 PDAP1Q13442 181 aaKnown RBP13.18□□□□□ -0.3
LINC01088-206ENST00000510667 METRNQ9UJH8 293 aa13.15□□□□□ -0.3
LINC01088-206ENST00000510667 SLC39A7Q92504 469 aa13.14□□□□□ -0.31
LINC01088-206ENST00000510667 NCAPD3P42695 1498 aa13.12□□□□□ -0.31
LINC01088-206ENST00000510667 C7P10643 843 aa13.1□□□□□ -0.31
LINC01088-206ENST00000510667 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.09□□□□□ -0.31
LINC01088-206ENST00000510667 POTEFA5A3E0 1075 aa13.09□□□□□ -0.31
LINC01088-206ENST00000510667 VGFO15240 615 aaPredicted RBP13.09□□□□□ -0.31
LINC01088-206ENST00000510667 ZFP91Q96JP5 570 aaPredicted RBP13.09□□□□□ -0.31
LINC01088-206ENST00000510667 ERCC6Q03468 1493 aa13.06□□□□□ -0.32
LINC01088-206ENST00000510667 POTEB2H3BUK9 544 aa13.06□□□□□ -0.32
LINC01088-206ENST00000510667 CABP2Q9NPB3 220 aa13.06□□□□□ -0.32
LINC01088-206ENST00000510667 COLQQ9Y215 455 aaPredicted RBP13.06□□□□□ -0.32
LINC01088-206ENST00000510667 IER5LQ5T953 404 aa13.04□□□□□ -0.32
LINC01088-206ENST00000510667 LHX8Q68G74 356 aa13.04□□□□□ -0.32
LINC01088-206ENST00000510667 GOLGA2Q08379 1002 aa13.02□□□□□ -0.33
LINC01088-206ENST00000510667 BAZ1AQ9NRL2 1556 aaPredicted RBP13□□□□□ -0.33
LINC01088-206ENST00000510667 ATAD2BQ9ULI0 1458 aa13□□□□□ -0.33
LINC01088-206ENST00000510667 SEC24BO95487 1268 aa13□□□□□ -0.33
LINC01088-206ENST00000510667 IRX5P78411 483 aaPredicted RBP13□□□□□ -0.33
LINC01088-206ENST00000510667 RTN4Q9NQC3 1192 aaKnown RBP13□□□□□ -0.33
LINC01088-206ENST00000510667 HMGXB3Q12766 1538 aa12.99□□□□□ -0.33
LINC01088-206ENST00000510667 MKRN3Q13064 507 aaKnown RBP12.99□□□□□ -0.33
LINC01088-206ENST00000510667 BCL11BQ9C0K0 894 aaPredicted RBP12.98□□□□□ -0.33
LINC01088-206ENST00000510667 POTEJP0CG39 1038 aa12.97□□□□□ -0.33
LINC01088-206ENST00000510667 EFCAB3Q8N7B9 438 aa12.97□□□□□ -0.33
LINC01088-206ENST00000510667 TAOK2Q9UL54 1235 aa12.97□□□□□ -0.33
LINC01088-206ENST00000510667 SMARCA4P51532 1647 aa12.97□□□□□ -0.33
LINC01088-206ENST00000510667 STK25O00506 426 aa12.96□□□□□ -0.33
LINC01088-206ENST00000510667 STK24Q9Y6E0 443 aa12.96□□□□□ -0.33
LINC01088-206ENST00000510667 SMARCA2P51531 1590 aa12.95□□□□□ -0.34
LINC01088-206ENST00000510667 PLCG2P16885 1265 aa12.95□□□□□ -0.34
LINC01088-206ENST00000510667 AMER1Q5JTC6 1135 aaPredicted RBP12.95□□□□□ -0.34
LINC01088-206ENST00000510667 NESP48681 1621 aa12.94□□□□□ -0.34
LINC01088-206ENST00000510667 THOC2Q8NI27 1593 aaKnown RBP12.94□□□□□ -0.34
LINC01088-206ENST00000510667 OCEL1Q9H607 264 aa12.93□□□□□ -0.34
LINC01088-206ENST00000510667 PDCD7Q8N8D1 485 aaKnown RBP12.92□□□□□ -0.34
LINC01088-206ENST00000510667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.92□□□□□ -0.34
LINC01088-206ENST00000510667 PEG3Q9GZU2 1588 aa12.9□□□□□ -0.34
LINC01088-206ENST00000510667 MROH2BQ7Z745 1585 aa12.89□□□□□ -0.35
LINC01088-206ENST00000510667 ILDR1Q86SU0 546 aaPredicted RBP12.88□□□□□ -0.35
LINC01088-206ENST00000510667 CHGAP10645 457 aaKnown RBP12.86□□□□□ -0.35
LINC01088-206ENST00000510667 DPY19L2Q6NUT2 758 aa12.86□□□□□ -0.35
LINC01088-206ENST00000510667 OTUD5Q96G74 571 aa12.86□□□□□ -0.35
LINC01088-206ENST00000510667 LAMC3Q9Y6N6 1575 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms